| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222526673
Identifier: 222526673
GI number: 222526673
Start: 4291018
End: 4292220
Strand: Direct
Name: 222526673
Synonym: Chy400_3442
Alternate gene names: NA
Gene position: 4291018-4292220 (Clockwise)
Preceding gene: 222526670
Following gene: 222526674
Centisome position: 81.44
GC content: 60.02
Gene sequence:
>1203_bases ATGCAGGAACAATTAATCAGACAACTTCGTCGCCTGAGTGCGCAACGCTGGCGGCAGTATACAATTGAACAACTGATACG TTCGCTCAGTATCGGGCTGCTTGTCGCTTGTATTGGCGCAATGCTGCCGGTGTTTGGCTTTGCCCCATTGCCACGGTCGC TGTTTGGCTGGATCATTGTCGGTAGTACGATGGTTGGCTGTCTACGGGCGCTGAAGTTCCGGCTGACACCAACGACGGCC GCCCGTCGCCTGGATCGGCGGTTTGGGCTGCAAGAGCAATTGAGCACGGCTCTGGAACTACAGGGCGCTCAAGTAGGGGT TGCCGGCAGGTTGCAGGCACAGGCGCAAGAGAGTGTACAGCGCGTGCAAAGGTATCTCAGCCGATCCCGTCAGCCGATCT GGTCAGAAGCACTCATGCCAGTCGCGTTACTGTTGATGCTCGCCGGCTTGCTGATGATCGTCTCCCCGCCAATCCCAGCC GTTGGTGAAGCGGAACCGTTGCCCGATCTTCTCCAACCCGATCCGGTTGCCACCCAACCCGATCCGATTCCCACTGAAGC TGCTCTCTCACCGGTATCAGGTAATGATCTGGACGTGATTTCAGCGCTGGCCGATGCCCTGCGCGATCAGGCATTGACGC GCCCCGCAGCAGAAGCTCTCGATCAGGGTGATCTTGCCGGGGCGGCTGATGCCCTGCGCGAACTGGCCGATCAGATGGGT GAGATTTCACCGGCAGCTCGCGAAGCATTGGCCGAGTCGTTGCGCGAGGCAGCCCGTGCAATCGACCAGACCCGTCCTGA TCTCGCCGATCAGTTGCGAGCCACTGCTGATGCACTTCAGTACGGCGATGGTGTTGCCGGTGCGACCGGTATGGATGCGC TGGCCGATGCGCTTGAGCGTCAACCGACGGCACCGGTAGCCGGCGGTGGCGGTGGGGCCGGGAATACGCCGGGGAGCCAG CGCCGTGAGCAGTCGTTTAACCCATCTGGGGTTGATGGTACGCCGTTAGAGCTAACGACTGATGGTAGTGGTCAGGTGCC GACAACCGGTACGTCTGCTGAACAATCAACCGGTGCTTCAGCGGGTGAACTGGTGATTCGTCCCGGCAGCGTCAATGCCG GTGGCCCGGTGCAGACAGCCACCGATCCGCTTCAGATTCCTACGGATGTTCGCGATGTGGTTCGCAACTATTTTTCGCCG TAA
Upstream 100 bases:
>100_bases TCGTTCATATTCTCCTCAATCTGCTACTCAGCCGGTATCTTTTGCCAGACATTCATCGATAAATCATATTTTACTCGATA GATTGTGGTACACTGCCAGT
Downstream 100 bases:
>100_bases ATCAGATAATCCGCCGCCACCTTTGTTCGACGAAGCCTTTCTGCGTCGGCTTGAACGACTGAGTCTGCAAGCGCAGCGAA CGCTGCGCGGTACGCCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MQEQLIRQLRRLSAQRWRQYTIEQLIRSLSIGLLVACIGAMLPVFGFAPLPRSLFGWIIVGSTMVGCLRALKFRLTPTTA ARRLDRRFGLQEQLSTALELQGAQVGVAGRLQAQAQESVQRVQRYLSRSRQPIWSEALMPVALLLMLAGLLMIVSPPIPA VGEAEPLPDLLQPDPVATQPDPIPTEAALSPVSGNDLDVISALADALRDQALTRPAAEALDQGDLAGAADALRELADQMG EISPAAREALAESLREAARAIDQTRPDLADQLRATADALQYGDGVAGATGMDALADALERQPTAPVAGGGGGAGNTPGSQ RREQSFNPSGVDGTPLELTTDGSGQVPTTGTSAEQSTGASAGELVIRPGSVNAGGPVQTATDPLQIPTDVRDVVRNYFSP
Sequences:
>Translated_400_residues MQEQLIRQLRRLSAQRWRQYTIEQLIRSLSIGLLVACIGAMLPVFGFAPLPRSLFGWIIVGSTMVGCLRALKFRLTPTTA ARRLDRRFGLQEQLSTALELQGAQVGVAGRLQAQAQESVQRVQRYLSRSRQPIWSEALMPVALLLMLAGLLMIVSPPIPA VGEAEPLPDLLQPDPVATQPDPIPTEAALSPVSGNDLDVISALADALRDQALTRPAAEALDQGDLAGAADALRELADQMG EISPAAREALAESLREAARAIDQTRPDLADQLRATADALQYGDGVAGATGMDALADALERQPTAPVAGGGGGAGNTPGSQ RREQSFNPSGVDGTPLELTTDGSGQVPTTGTSAEQSTGASAGELVIRPGSVNAGGPVQTATDPLQIPTDVRDVVRNYFSP >Mature_400_residues MQEQLIRQLRRLSAQRWRQYTIEQLIRSLSIGLLVACIGAMLPVFGFAPLPRSLFGWIIVGSTMVGCLRALKFRLTPTTA ARRLDRRFGLQEQLSTALELQGAQVGVAGRLQAQAQESVQRVQRYLSRSRQPIWSEALMPVALLLMLAGLLMIVSPPIPA VGEAEPLPDLLQPDPVATQPDPIPTEAALSPVSGNDLDVISALADALRDQALTRPAAEALDQGDLAGAADALRELADQMG EISPAAREALAESLREAARAIDQTRPDLADQLRATADALQYGDGVAGATGMDALADALERQPTAPVAGGGGGAGNTPGSQ RREQSFNPSGVDGTPLELTTDGSGQVPTTGTSAEQSTGASAGELVIRPGSVNAGGPVQTATDPLQIPTDVRDVVRNYFSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42082; Mature: 42082
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEQLIRQLRRLSAQRWRQYTIEQLIRSLSIGLLVACIGAMLPVFGFAPLPRSLFGWIIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GSTMVGCLRALKFRLTPTTAARRLDRRFGLQEQLSTALELQGAQVGVAGRLQAQAQESVQ HHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RVQRYLSRSRQPIWSEALMPVALLLMLAGLLMIVSPPIPAVGEAEPLPDLLQPDPVATQP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCC DPIPTEAALSPVSGNDLDVISALADALRDQALTRPAAEALDQGDLAGAADALRELADQMG CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHH EISPAAREALAESLREAARAIDQTRPDLADQLRATADALQYGDGVAGATGMDALADALER CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC QPTAPVAGGGGGAGNTPGSQRREQSFNPSGVDGTPLELTTDGSGQVPTTGTSAEQSTGAS CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCC AGELVIRPGSVNAGGPVQTATDPLQIPTDVRDVVRNYFSP CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MQEQLIRQLRRLSAQRWRQYTIEQLIRSLSIGLLVACIGAMLPVFGFAPLPRSLFGWIIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH GSTMVGCLRALKFRLTPTTAARRLDRRFGLQEQLSTALELQGAQVGVAGRLQAQAQESVQ HHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH RVQRYLSRSRQPIWSEALMPVALLLMLAGLLMIVSPPIPAVGEAEPLPDLLQPDPVATQP HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCC DPIPTEAALSPVSGNDLDVISALADALRDQALTRPAAEALDQGDLAGAADALRELADQMG CCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHH EISPAAREALAESLREAARAIDQTRPDLADQLRATADALQYGDGVAGATGMDALADALER CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC QPTAPVAGGGGGAGNTPGSQRREQSFNPSGVDGTPLELTTDGSGQVPTTGTSAEQSTGAS CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCC AGELVIRPGSVNAGGPVQTATDPLQIPTDVRDVVRNYFSP CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA