| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526674
Identifier: 222526674
GI number: 222526674
Start: 4292192
End: 4293112
Strand: Direct
Name: 222526674
Synonym: Chy400_3443
Alternate gene names: NA
Gene position: 4292192-4293112 (Clockwise)
Preceding gene: 222526673
Following gene: 222526675
Centisome position: 81.46
GC content: 56.89
Gene sequence:
>921_bases ATGTGGTTCGCAACTATTTTTCGCCGTAAATCAGATAATCCGCCGCCACCTTTGTTCGACGAAGCCTTTCTGCGTCGGCT TGAACGACTGAGTCTGCAAGCGCAGCGAACGCTGCGCGGTACGCCAATTGTTGGTCGGTATCCCGGTCGGCAACCGATGC CGGCAACCATTTTTAGCGATCATCGTCCCTATACGCCCGGTGATGATCCCAGGTATCTTGACTGGCATGTCTACGCTCGC CAGGAACATCTGCTGGTGCGTTTGGGTGAAACCGAACAGGATGTGGCGGTTAGTCTGATCCTTGATACCTCGCGTAGTAT GGTGACCGGCGATCCGGAACGGTTGCGCCGGGCAATTCAGTTGACCGGTGCCATGGGCTATCTGGCATTGGCCCACGGTG ATCGAGTGACCGTCTTGACCGGTGATCAACCACAGCCACTCTTTGGCCCGGCACGTGGCAAAATGCGCGCGGTTGAACTC TTCAAGGCGCTGCGTGACCTGACACCGACCCGTCGCATCGATTTAGAGCAGGCAGCTCGCCAGATAGTGCAACATCATCC CAGGGGCGGTCTGGTGTTGTTACTCTCCGACCTGCTCACCCCGATGCCGATTGAGCGGCTGAACCAGATTTTGCCTGCAC CGCGCTGGCAGGTTATGGTGCTGCACCTGCTGAGTAACGCCGATCTGAACCCGAATCTGTACGGGCCGCTGGAGCTGGTT GATAGCGAAACCGGTGATCAGTTGGTTGTTGATCTTGATGAGGCGACATTGGCGGCTTATCGTGCTGCGGTACAGCATTG GCGTACATCAATCGCTCAGCACTGCTCTGCCCGTGGTTTGCATTATGCGCCGGTATTGACCGATTGGGTGCTGGAACGGC AAGTGATCCCGTTTTTGCGCATCCGCCGCTTTCTGACCTGA
Upstream 100 bases:
>100_bases GCTTCAGCGGGTGAACTGGTGATTCGTCCCGGCAGCGTCAATGCCGGTGGCCCGGTGCAGACAGCCACCGATCCGCTTCA GATTCCTACGGATGTTCGCG
Downstream 100 bases:
>100_bases CGTCGGTTAGGCGCGTTTGCTGTTGTGCAAATCCGGTATTGAGCATCGCCGGTCGTGATTCCGTTCAGGGCAGTTGCTCT CTGCGCGGATGTTCGTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MWFATIFRRKSDNPPPPLFDEAFLRRLERLSLQAQRTLRGTPIVGRYPGRQPMPATIFSDHRPYTPGDDPRYLDWHVYAR QEHLLVRLGETEQDVAVSLILDTSRSMVTGDPERLRRAIQLTGAMGYLALAHGDRVTVLTGDQPQPLFGPARGKMRAVEL FKALRDLTPTRRIDLEQAARQIVQHHPRGGLVLLLSDLLTPMPIERLNQILPAPRWQVMVLHLLSNADLNPNLYGPLELV DSETGDQLVVDLDEATLAAYRAAVQHWRTSIAQHCSARGLHYAPVLTDWVLERQVIPFLRIRRFLT
Sequences:
>Translated_306_residues MWFATIFRRKSDNPPPPLFDEAFLRRLERLSLQAQRTLRGTPIVGRYPGRQPMPATIFSDHRPYTPGDDPRYLDWHVYAR QEHLLVRLGETEQDVAVSLILDTSRSMVTGDPERLRRAIQLTGAMGYLALAHGDRVTVLTGDQPQPLFGPARGKMRAVEL FKALRDLTPTRRIDLEQAARQIVQHHPRGGLVLLLSDLLTPMPIERLNQILPAPRWQVMVLHLLSNADLNPNLYGPLELV DSETGDQLVVDLDEATLAAYRAAVQHWRTSIAQHCSARGLHYAPVLTDWVLERQVIPFLRIRRFLT >Mature_306_residues MWFATIFRRKSDNPPPPLFDEAFLRRLERLSLQAQRTLRGTPIVGRYPGRQPMPATIFSDHRPYTPGDDPRYLDWHVYAR QEHLLVRLGETEQDVAVSLILDTSRSMVTGDPERLRRAIQLTGAMGYLALAHGDRVTVLTGDQPQPLFGPARGKMRAVEL FKALRDLTPTRRIDLEQAARQIVQHHPRGGLVLLLSDLLTPMPIERLNQILPAPRWQVMVLHLLSNADLNPNLYGPLELV DSETGDQLVVDLDEATLAAYRAAVQHWRTSIAQHCSARGLHYAPVLTDWVLERQVIPFLRIRRFLT
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34883; Mature: 34883
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFATIFRRKSDNPPPPLFDEAFLRRLERLSLQAQRTLRGTPIVGRYPGRQPMPATIFSD CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCC HRPYTPGDDPRYLDWHVYARQEHLLVRLGETEQDVAVSLILDTSRSMVTGDPERLRRAIQ CCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHEEEEEEECCCCCCCCCHHHHHHHHH LTGAMGYLALAHGDRVTVLTGDQPQPLFGPARGKMRAVELFKALRDLTPTRRIDLEQAAR HHHHHHEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH QIVQHHPRGGLVLLLSDLLTPMPIERLNQILPAPRWQVMVLHLLSNADLNPNLYGPLELV HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHEE DSETGDQLVVDLDEATLAAYRAAVQHWRTSIAQHCSARGLHYAPVLTDWVLERQVIPFLR CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHH IRRFLT HHHHCC >Mature Secondary Structure MWFATIFRRKSDNPPPPLFDEAFLRRLERLSLQAQRTLRGTPIVGRYPGRQPMPATIFSD CCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCC HRPYTPGDDPRYLDWHVYARQEHLLVRLGETEQDVAVSLILDTSRSMVTGDPERLRRAIQ CCCCCCCCCCCEEEEEEEECCCEEEEEECCCCCHHEEEEEEECCCCCCCCCHHHHHHHHH LTGAMGYLALAHGDRVTVLTGDQPQPLFGPARGKMRAVELFKALRDLTPTRRIDLEQAAR HHHHHHEEEEECCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH QIVQHHPRGGLVLLLSDLLTPMPIERLNQILPAPRWQVMVLHLLSNADLNPNLYGPLELV HHHHHCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHEE DSETGDQLVVDLDEATLAAYRAAVQHWRTSIAQHCSARGLHYAPVLTDWVLERQVIPFLR CCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHH IRRFLT HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA