| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526663
Identifier: 222526663
GI number: 222526663
Start: 4281238
End: 4282527
Strand: Reverse
Name: 222526663
Synonym: Chy400_3432
Alternate gene names: NA
Gene position: 4282527-4281238 (Counterclockwise)
Preceding gene: 222526666
Following gene: 222526662
Centisome position: 81.28
GC content: 58.06
Gene sequence:
>1290_bases ATGAATGTTACCCGCCCACTCTTAATCTTGCTCCTCGCCGGTGCCAGTTATCTGGCTGCCCAAAGCACCGGTCAACGCCT CTTTTTCCACCTGAGCTACATTCTGGCCGGTTTACCTCTGGTAGCGCTCACCTGGACGTGGCTCAATTTGCGTGGTCTAA GCGTCGAGCGTGAACACTCCAGCCTCCGCGCCAGCGTTGGTGAATATACGCGGGAACGAATTACGATTCGTAACCGCTGG TGGTTACCCAAACTGTGGATCGAACTACAAGACGAGTCGGATCTCCCCAACCACGAAGCCGGTTTCGTCACCTATCTGGG TAGCCGCGAGACAACACGCTGGACAACACGCACGCTATGTACCCATCGCGGACGGTTCAGACTCGGCCCAACCCGGATCA TCAGCAGTGATCCGTTCGGCCTCTTCCGCTTCTCTCGCCTGATTGCCGGTGGTGGCGAGATCATCGTCTATCCACCCACC GAGGTCTTGCCCGATGTTCGGCTGCCCGGTGCCGACCTGATCGGTGGATCGTCGAGCCTCATCCGCACACATACGATGAC CCCCAATGTTGCGACGATCCGTGATTATCAACCCGGCGATAGCCTGAACCGCATTCACTGGCGCAGTACTGCCCGCCACG GACGGCTGATGGTCAAAGAATTCGAGCTAGACCCGTTCGCCGACATTTATCTCATTCTCGATTGCCATGAGCGAGCGGTC GTGCGTATGCCATCAGCACAACCGGAACGCGATGAACGGCAGAGCGCTCCCTGGTGGCAGCGCCAACCTCCACCTCGCCA TCGCCCACCACCTGACTCCACGGAAGAGCATGCAGTGTATGTTGCTGCTTCGCTTGCCCGTACCCTGCTCGCCCAAAACC GGATCGTTGGCCTGCTCGCCTGGAGTGAACGACTTGAGGTCATTCCGGCTGAACGTGAGGAGCGTCAGCTCTGGAAGATG CTCGAATTGCTGGCCGTACTACGCGCCGTCGGGCAACATTCGCTGGCCGAACTCCTGATCGCCGAGGGGCAGCGCTTCGG GCGTGATACGACATTGATCATTATTACGTCCGATCTCGACCCTCGCTGGATTACTGCCCTGCAACAACACCTCTACCGTG GGGCACGGGCTGCTGTGATTTTTATCGATCCGCGCAGTTATGGCGGATGGAATGACCCAACTCCACTCCTCAACCATCTC ACCAGCTTACGGATCGATGTCTACCATGTCCGGCGCGGTGAAGCGTTAGCCGAGTCGTTGCGCTTCCCACTTCAATCAGG AACGCAGTAA
Upstream 100 bases:
>100_bases ATCGTGAAGGTCGTCTGCAACGACAGTTCCCCACTCCCCATTCCCACCTCACGTTGTGCTACAATTCGATAAGACGTATC ATAATGCTTACGGTTCCAAC
Downstream 100 bases:
>100_bases TAGTATCTCTGACCCTTAAACAAAACTCCTGTGGTCAGACCATTGAGCATCTCATTGCAATCACCAATGTAGTACTAACG TCGAGAAGGAATAATTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MNVTRPLLILLLAGASYLAAQSTGQRLFFHLSYILAGLPLVALTWTWLNLRGLSVEREHSSLRASVGEYTRERITIRNRW WLPKLWIELQDESDLPNHEAGFVTYLGSRETTRWTTRTLCTHRGRFRLGPTRIISSDPFGLFRFSRLIAGGGEIIVYPPT EVLPDVRLPGADLIGGSSSLIRTHTMTPNVATIRDYQPGDSLNRIHWRSTARHGRLMVKEFELDPFADIYLILDCHERAV VRMPSAQPERDERQSAPWWQRQPPPRHRPPPDSTEEHAVYVAASLARTLLAQNRIVGLLAWSERLEVIPAEREERQLWKM LELLAVLRAVGQHSLAELLIAEGQRFGRDTTLIIITSDLDPRWITALQQHLYRGARAAVIFIDPRSYGGWNDPTPLLNHL TSLRIDVYHVRRGEALAESLRFPLQSGTQ
Sequences:
>Translated_429_residues MNVTRPLLILLLAGASYLAAQSTGQRLFFHLSYILAGLPLVALTWTWLNLRGLSVEREHSSLRASVGEYTRERITIRNRW WLPKLWIELQDESDLPNHEAGFVTYLGSRETTRWTTRTLCTHRGRFRLGPTRIISSDPFGLFRFSRLIAGGGEIIVYPPT EVLPDVRLPGADLIGGSSSLIRTHTMTPNVATIRDYQPGDSLNRIHWRSTARHGRLMVKEFELDPFADIYLILDCHERAV VRMPSAQPERDERQSAPWWQRQPPPRHRPPPDSTEEHAVYVAASLARTLLAQNRIVGLLAWSERLEVIPAEREERQLWKM LELLAVLRAVGQHSLAELLIAEGQRFGRDTTLIIITSDLDPRWITALQQHLYRGARAAVIFIDPRSYGGWNDPTPLLNHL TSLRIDVYHVRRGEALAESLRFPLQSGTQ >Mature_429_residues MNVTRPLLILLLAGASYLAAQSTGQRLFFHLSYILAGLPLVALTWTWLNLRGLSVEREHSSLRASVGEYTRERITIRNRW WLPKLWIELQDESDLPNHEAGFVTYLGSRETTRWTTRTLCTHRGRFRLGPTRIISSDPFGLFRFSRLIAGGGEIIVYPPT EVLPDVRLPGADLIGGSSSLIRTHTMTPNVATIRDYQPGDSLNRIHWRSTARHGRLMVKEFELDPFADIYLILDCHERAV VRMPSAQPERDERQSAPWWQRQPPPRHRPPPDSTEEHAVYVAASLARTLLAQNRIVGLLAWSERLEVIPAEREERQLWKM LELLAVLRAVGQHSLAELLIAEGQRFGRDTTLIIITSDLDPRWITALQQHLYRGARAAVIFIDPRSYGGWNDPTPLLNHL TSLRIDVYHVRRGEALAESLRFPLQSGTQ
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48975; Mature: 48975
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVTRPLLILLLAGASYLAAQSTGQRLFFHLSYILAGLPLVALTWTWLNLRGLSVEREHS CCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHEEECCCEEHHHH SLRASVGEYTRERITIRNRWWLPKLWIELQDESDLPNHEAGFVTYLGSRETTRWTTRTLC HHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHH THRGRFRLGPTRIISSDPFGLFRFSRLIAGGGEIIVYPPTEVLPDVRLPGADLIGGSSSL HCCCCEEECCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCE IRTHTMTPNVATIRDYQPGDSLNRIHWRSTARHGRLMVKEFELDPFADIYLILDCHERAV EEEEECCCCCEEEECCCCCCCCCCEEEHHHCCCCCEEEEEECCCCCCEEEEEEECCCCEE VRMPSAQPERDERQSAPWWQRQPPPRHRPPPDSTEEHAVYVAASLARTLLAQNRIVGLLA EECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCEEEEEE WSERLEVIPAEREERQLWKMLELLAVLRAVGQHSLAELLIAEGQRFGRDTTLIIITSDLD ECCCHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHCCCCEEEEEEECCCC PRWITALQQHLYRGARAAVIFIDPRSYGGWNDPTPLLNHLTSLRIDVYHVRRGEALAESL HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEECCHHHHHHHH RFPLQSGTQ CCCCCCCCC >Mature Secondary Structure MNVTRPLLILLLAGASYLAAQSTGQRLFFHLSYILAGLPLVALTWTWLNLRGLSVEREHS CCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHEEECCCEEHHHH SLRASVGEYTRERITIRNRWWLPKLWIELQDESDLPNHEAGFVTYLGSRETTRWTTRTLC HHHHHHHHHHHHHEEEECCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHH THRGRFRLGPTRIISSDPFGLFRFSRLIAGGGEIIVYPPTEVLPDVRLPGADLIGGSSSL HCCCCEEECCEEEECCCCCHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCCCCCCCCE IRTHTMTPNVATIRDYQPGDSLNRIHWRSTARHGRLMVKEFELDPFADIYLILDCHERAV EEEEECCCCCEEEECCCCCCCCCCEEEHHHCCCCCEEEEEECCCCCCEEEEEEECCCCEE VRMPSAQPERDERQSAPWWQRQPPPRHRPPPDSTEEHAVYVAASLARTLLAQNRIVGLLA EECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCEEEEEE WSERLEVIPAEREERQLWKMLELLAVLRAVGQHSLAELLIAEGQRFGRDTTLIIITSDLD ECCCHHCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHCCCCEEEEEEECCCC PRWITALQQHLYRGARAAVIFIDPRSYGGWNDPTPLLNHLTSLRIDVYHVRRGEALAESL HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHEEEEEEECCHHHHHHHH RFPLQSGTQ CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA