| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is artP [H]
Identifier: 222526655
GI number: 222526655
Start: 4266129
End: 4266926
Strand: Direct
Name: artP [H]
Synonym: Chy400_3424
Alternate gene names: 222526655
Gene position: 4266129-4266926 (Clockwise)
Preceding gene: 222526641
Following gene: 222526658
Centisome position: 80.97
GC content: 57.52
Gene sequence:
>798_bases ATGCAGTGGCGCGACTGGCGGCGATGGCTTGATGGTCTGTCAGTAGTTGTGTTGCTGGCCTATGGCTGGCTGGCCTGGAG TGTGCAAACTGGTACGACTGCCATTGATCCGGTTTATGCCGATCTCCGTGCGCGTGGGGTATTGCGGGTAGCGGTTGATG CCGGTTACCGGCCCTTTGTCGAGGAGCGAGGTGGCCGGCTGGTGGGGTTTGACATCGATCTGATTACGGCGCTGGCCAAC GAATTAGGGTTTGAGGTTGTGTTCGTGCGGAGTGGGTTTGATGCACTCTACGACCAGTTAACCAGTCGTCAGGCCGATCT GATTGCCTCGGCTCTGCCTTACGCGCCAGAGCAAGGGTACCGTGCGCGCTTCTCCCAGCCTTATTTCGATGGTGGCTTGA TGCTACTGACCAGGAACGATAGCACTATCGCTGATCTTGCCGATCTGCGAGGGCAACGTATCGGTGTGGTACTGGGAAGT GAGGGTGACGCGCTGGCGTATCGCTTCGCGCAGACAACTCCGCTGCACCGCTATACCGCTGATGAAGCCGCCCCCCTGAT CGAGGCATTGCAGCGCGGTGAAGTTGATGCGATTATTCTCGACCACGTTACCGCATTGGGTGCATTGGCGACCGGTGATC TGCGGATTGCTACCGCTCTCAGCTACGAGCCGTATGTGCTGGTTATGCCGGCGTCAGCTTTTCAATTGGAAAGTGAAATT AATCGTGCGCTGGATCGGCTGAAGGAACAGGGTGTGCTACACGAGTTGCAACGGCGCTGGATGCTGAAGGGTGAGTAG
Upstream 100 bases:
>100_bases AAAGGGGAATAGGCCGTGATTGATGCAATAGCTTTATAATGAAGTATACCGACAGAGTATTATTCGGTCAAGGCGAGAAA AATGAGAAAGCGTTAAGGAA
Downstream 100 bases:
>100_bases TATATGTCATACGGCGGGCCTTGTAGGGGCACGGCATGCCGTGCCCCTACGTCTACGCCGACGAAAATCCGGCAGATCGG TCACGTGCAGCCGTGCCCCT
Product: family 3 extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MQWRDWRRWLDGLSVVVLLAYGWLAWSVQTGTTAIDPVYADLRARGVLRVAVDAGYRPFVEERGGRLVGFDIDLITALAN ELGFEVVFVRSGFDALYDQLTSRQADLIASALPYAPEQGYRARFSQPYFDGGLMLLTRNDSTIADLADLRGQRIGVVLGS EGDALAYRFAQTTPLHRYTADEAAPLIEALQRGEVDAIILDHVTALGALATGDLRIATALSYEPYVLVMPASAFQLESEI NRALDRLKEQGVLHELQRRWMLKGE
Sequences:
>Translated_265_residues MQWRDWRRWLDGLSVVVLLAYGWLAWSVQTGTTAIDPVYADLRARGVLRVAVDAGYRPFVEERGGRLVGFDIDLITALAN ELGFEVVFVRSGFDALYDQLTSRQADLIASALPYAPEQGYRARFSQPYFDGGLMLLTRNDSTIADLADLRGQRIGVVLGS EGDALAYRFAQTTPLHRYTADEAAPLIEALQRGEVDAIILDHVTALGALATGDLRIATALSYEPYVLVMPASAFQLESEI NRALDRLKEQGVLHELQRRWMLKGE >Mature_265_residues MQWRDWRRWLDGLSVVVLLAYGWLAWSVQTGTTAIDPVYADLRARGVLRVAVDAGYRPFVEERGGRLVGFDIDLITALAN ELGFEVVFVRSGFDALYDQLTSRQADLIASALPYAPEQGYRARFSQPYFDGGLMLLTRNDSTIADLADLRGQRIGVVLGS EGDALAYRFAQTTPLHRYTADEAAPLIEALQRGEVDAIILDHVTALGALATGDLRIATALSYEPYVLVMPASAFQLESEI NRALDRLKEQGVLHELQRRWMLKGE
Specific function: Part of a binding-protein-dependent transport system for arginine [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=225, Percent_Identity=25.7777777777778, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787085, Length=224, Percent_Identity=28.125, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787031, Length=219, Percent_Identity=25.5707762557078, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787088, Length=233, Percent_Identity=23.6051502145923, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1788649, Length=250, Percent_Identity=25.2, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1788648, Length=230, Percent_Identity=22.1739130434783, Blast_Score=61, Evalue=8e-11,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29476; Mature: 29476
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQWRDWRRWLDGLSVVVLLAYGWLAWSVQTGTTAIDPVYADLRARGVLRVAVDAGYRPFV CCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCEEEEEECCCCCCHH EERGGRLVGFDIDLITALANELGFEVVFVRSGFDALYDQLTSRQADLIASALPYAPEQGY HHCCCEEEEEHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC RARFSQPYFDGGLMLLTRNDSTIADLADLRGQRIGVVLGSEGDALAYRFAQTTPLHRYTA HHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCHHHCC DEAAPLIEALQRGEVDAIILDHVTALGALATGDLRIATALSYEPYVLVMPASAFQLESEI HHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCHHHHHHHHH NRALDRLKEQGVLHELQRRWMLKGE HHHHHHHHHCCHHHHHHHHCCCCCC >Mature Secondary Structure MQWRDWRRWLDGLSVVVLLAYGWLAWSVQTGTTAIDPVYADLRARGVLRVAVDAGYRPFV CCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHCCEEEEEECCCCCCHH EERGGRLVGFDIDLITALANELGFEVVFVRSGFDALYDQLTSRQADLIASALPYAPEQGY HHCCCEEEEEHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCC RARFSQPYFDGGLMLLTRNDSTIADLADLRGQRIGVVLGSEGDALAYRFAQTTPLHRYTA HHCCCCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCHHHCC DEAAPLIEALQRGEVDAIILDHVTALGALATGDLRIATALSYEPYVLVMPASAFQLESEI HHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCEEEEEEECCCCEEEEECCHHHHHHHHH NRALDRLKEQGVLHELQRRWMLKGE HHHHHHHHHCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]