| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is pkwA [H]
Identifier: 222526641
GI number: 222526641
Start: 4247480
End: 4248529
Strand: Direct
Name: pkwA [H]
Synonym: Chy400_3409
Alternate gene names: 222526641
Gene position: 4247480-4248529 (Clockwise)
Preceding gene: 222526640
Following gene: 222526655
Centisome position: 80.61
GC content: 54.57
Gene sequence:
>1050_bases ATGCGGCGATTTCTGGTACTGATTGGCATCGTCGGGCTGGCGTGTGTGCTGATAGGTGGATTGGGTGGCTTTGCCATGTT CTGGTTCAGACGAGAAGAACAACCGGTCATCGTCTGGGAGCTTGACAATATTAACTCAGCGTTATTCCTGCGCAATGATC TACTCGCTGTTGCAGACGACAGGCAGACAACGTTCCGGCGTTTTCCTGACAATCAGGTGCTTCAGACTCTACCGGTCGGC GGTTACCTCGCTTTGCATCCGGATCGCACCCTGCTTGCTATCGGTAGTTGGGGTACAGTCTGGCTGTACGATCCTGTAAG CGGCGAACGACAAGCAACCTTCAATTGCTGGCCACGGGGTGAGCATGTATATCCAATGAGCCTGGCTTTTTCCCCTGATG GATCTATCCTTGCTGTCAGTGAGTTTCACCACAGTCGGGGCCAGGAGGTACAGCTTTGGGACGTAATGAATCAACGGCAG ATTGACTCAATCCTGCTCGCTGATCCTGACGCGGCGACCATCATCGCACTTGCCTTTAGCCCTGATGGTAAACATCTGGT TGTTGGTACCGATGCCAGTGTCTGGCTGGTTGATGTCGCACAACGCACCGTTAGCCGGCAAATCCAGCCCAGGCCGAGCG GGAGCATTGCGTTTAGTCCCGACGGTTCTCGTCTGGTCCTGGGTGGTAAGTTTATTCATGTCTACGATACTGCAACCTGG CAGCTCGCGTATAGAATTTCTTTTCCCGGAGAGAAAGAAGAACGTTCACCGCAGGAATTTATCGCTGCTCGCAAGATGCC AGTGGCGATTAGTCCTGATGGCCGCTGGCTGGCGACTCCTAACCGACCTCCGCCTGGCGATAGCTTCTCGTTTTTCGAGC CAGGTCCGCCGCGCCAGACCATTGCGCTGCGCAATCCTGCCGATGGTCGGCGAAAACGCATCTTGAGCGGCAGCCCAATT CGCCTGAATATCTTAATGTTTAGTCCCGATGGGGAGTGGTTGCTGGATGTGGGGTTGAGTGACGTGAGGGCATGGCGGGT TGAGAATTGA
Upstream 100 bases:
>100_bases CTTTTTGGTATTGGGAAGGGTGGCCGGCGAATAATCACTGCCCCCTTCAGCGGCTGTTCGGCTCAGGCAGTGCATCTGCC ATTCTCGTCCAGAGGGGTCT
Downstream 100 bases:
>100_bases CGCTGAGCCAATCACGCGCTGGACTAAAAATCGTTCGCGCTCCGTGATGCGCGTGTTGAGTCGTTGGCGTGCGGGAGCCA GGTTTCCGCTTCAACCTTGC
Product: WD-40 repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADDRQTTFRRFPDNQVLQTLPVG GYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRGEHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQ IDSILLADPDAATIIALAFSPDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQTIALRNPADGRRKRILSGSPI RLNILMFSPDGEWLLDVGLSDVRAWRVEN
Sequences:
>Translated_349_residues MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADDRQTTFRRFPDNQVLQTLPVG GYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRGEHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQ IDSILLADPDAATIIALAFSPDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQTIALRNPADGRRKRILSGSPI RLNILMFSPDGEWLLDVGLSDVRAWRVEN >Mature_349_residues MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADDRQTTFRRFPDNQVLQTLPVG GYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRGEHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQ IDSILLADPDAATIIALAFSPDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQTIALRNPADGRRKRILSGSPI RLNILMFSPDGEWLLDVGLSDVRAWRVEN
Specific function: May play a regulatory role during the complex growth cycle and in secondary metabolite production [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 7 WD repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020472 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR015943 - InterPro: IPR001680 - InterPro: IPR011046 - InterPro: IPR019782 - InterPro: IPR019775 - InterPro: IPR017986 - InterPro: IPR019781 [H]
Pfam domain/function: PF00069 Pkinase; PF00400 WD40 [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 38997; Mature: 38997
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADD CCCEEEHHHHHHHHHHHHHCCCHHEEEEEECCCCCEEEEEECCCCCEEEEECCEEEEECC RQTTFRRFPDNQVLQTLPVGGYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRG CCHHHHHCCCCHHHHHCCCCCEEEECCCCEEEEEECCCEEEEECCCCCCCEEEEEECCCC EHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQIDSILLADPDAATIIALAFS CEEEEEEEEECCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEEC PDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW CCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCEEECCCCCEEEECCEEEEEEECEEE QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQT EEEEEEECCCCCCCCCHHHHHHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCE IALRNPADGRRKRILSGSPIRLNILMFSPDGEWLLDVGLSDVRAWRVEN EEEECCCCHHHHEECCCCCEEEEEEEECCCCCEEEECCCCCEEEEEECC >Mature Secondary Structure MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADD CCCEEEHHHHHHHHHHHHHCCCHHEEEEEECCCCCEEEEEECCCCCEEEEECCEEEEECC RQTTFRRFPDNQVLQTLPVGGYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRG CCHHHHHCCCCHHHHHCCCCCEEEECCCCEEEEEECCCEEEEECCCCCCCEEEEEECCCC EHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQIDSILLADPDAATIIALAFS CEEEEEEEEECCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEEC PDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW CCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCEEECCCCCEEEECCEEEEEEECEEE QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQT EEEEEEECCCCCCCCCHHHHHHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCE IALRNPADGRRKRILSGSPIRLNILMFSPDGEWLLDVGLSDVRAWRVEN EEEECCCCHHHHEECCCCCEEEEEEEECCCCCEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8631732 [H]