Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is pkwA [H]

Identifier: 222526641

GI number: 222526641

Start: 4247480

End: 4248529

Strand: Direct

Name: pkwA [H]

Synonym: Chy400_3409

Alternate gene names: 222526641

Gene position: 4247480-4248529 (Clockwise)

Preceding gene: 222526640

Following gene: 222526655

Centisome position: 80.61

GC content: 54.57

Gene sequence:

>1050_bases
ATGCGGCGATTTCTGGTACTGATTGGCATCGTCGGGCTGGCGTGTGTGCTGATAGGTGGATTGGGTGGCTTTGCCATGTT
CTGGTTCAGACGAGAAGAACAACCGGTCATCGTCTGGGAGCTTGACAATATTAACTCAGCGTTATTCCTGCGCAATGATC
TACTCGCTGTTGCAGACGACAGGCAGACAACGTTCCGGCGTTTTCCTGACAATCAGGTGCTTCAGACTCTACCGGTCGGC
GGTTACCTCGCTTTGCATCCGGATCGCACCCTGCTTGCTATCGGTAGTTGGGGTACAGTCTGGCTGTACGATCCTGTAAG
CGGCGAACGACAAGCAACCTTCAATTGCTGGCCACGGGGTGAGCATGTATATCCAATGAGCCTGGCTTTTTCCCCTGATG
GATCTATCCTTGCTGTCAGTGAGTTTCACCACAGTCGGGGCCAGGAGGTACAGCTTTGGGACGTAATGAATCAACGGCAG
ATTGACTCAATCCTGCTCGCTGATCCTGACGCGGCGACCATCATCGCACTTGCCTTTAGCCCTGATGGTAAACATCTGGT
TGTTGGTACCGATGCCAGTGTCTGGCTGGTTGATGTCGCACAACGCACCGTTAGCCGGCAAATCCAGCCCAGGCCGAGCG
GGAGCATTGCGTTTAGTCCCGACGGTTCTCGTCTGGTCCTGGGTGGTAAGTTTATTCATGTCTACGATACTGCAACCTGG
CAGCTCGCGTATAGAATTTCTTTTCCCGGAGAGAAAGAAGAACGTTCACCGCAGGAATTTATCGCTGCTCGCAAGATGCC
AGTGGCGATTAGTCCTGATGGCCGCTGGCTGGCGACTCCTAACCGACCTCCGCCTGGCGATAGCTTCTCGTTTTTCGAGC
CAGGTCCGCCGCGCCAGACCATTGCGCTGCGCAATCCTGCCGATGGTCGGCGAAAACGCATCTTGAGCGGCAGCCCAATT
CGCCTGAATATCTTAATGTTTAGTCCCGATGGGGAGTGGTTGCTGGATGTGGGGTTGAGTGACGTGAGGGCATGGCGGGT
TGAGAATTGA

Upstream 100 bases:

>100_bases
CTTTTTGGTATTGGGAAGGGTGGCCGGCGAATAATCACTGCCCCCTTCAGCGGCTGTTCGGCTCAGGCAGTGCATCTGCC
ATTCTCGTCCAGAGGGGTCT

Downstream 100 bases:

>100_bases
CGCTGAGCCAATCACGCGCTGGACTAAAAATCGTTCGCGCTCCGTGATGCGCGTGTTGAGTCGTTGGCGTGCGGGAGCCA
GGTTTCCGCTTCAACCTTGC

Product: WD-40 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADDRQTTFRRFPDNQVLQTLPVG
GYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRGEHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQ
IDSILLADPDAATIIALAFSPDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW
QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQTIALRNPADGRRKRILSGSPI
RLNILMFSPDGEWLLDVGLSDVRAWRVEN

Sequences:

>Translated_349_residues
MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADDRQTTFRRFPDNQVLQTLPVG
GYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRGEHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQ
IDSILLADPDAATIIALAFSPDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW
QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQTIALRNPADGRRKRILSGSPI
RLNILMFSPDGEWLLDVGLSDVRAWRVEN
>Mature_349_residues
MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADDRQTTFRRFPDNQVLQTLPVG
GYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRGEHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQ
IDSILLADPDAATIIALAFSPDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW
QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQTIALRNPADGRRKRILSGSPI
RLNILMFSPDGEWLLDVGLSDVRAWRVEN

Specific function: May play a regulatory role during the complex growth cycle and in secondary metabolite production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 7 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020472
- InterPro:   IPR011009
- InterPro:   IPR000719
- InterPro:   IPR017441
- InterPro:   IPR017442
- InterPro:   IPR008271
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00069 Pkinase; PF00400 WD40 [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 38997; Mature: 38997

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADD
CCCEEEHHHHHHHHHHHHHCCCHHEEEEEECCCCCEEEEEECCCCCEEEEECCEEEEECC
RQTTFRRFPDNQVLQTLPVGGYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRG
CCHHHHHCCCCHHHHHCCCCCEEEECCCCEEEEEECCCEEEEECCCCCCCEEEEEECCCC
EHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQIDSILLADPDAATIIALAFS
CEEEEEEEEECCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEEC
PDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW
CCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCEEECCCCCEEEECCEEEEEEECEEE
QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQT
EEEEEEECCCCCCCCCHHHHHHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCE
IALRNPADGRRKRILSGSPIRLNILMFSPDGEWLLDVGLSDVRAWRVEN
EEEECCCCHHHHEECCCCCEEEEEEEECCCCCEEEECCCCCEEEEEECC
>Mature Secondary Structure
MRRFLVLIGIVGLACVLIGGLGGFAMFWFRREEQPVIVWELDNINSALFLRNDLLAVADD
CCCEEEHHHHHHHHHHHHHCCCHHEEEEEECCCCCEEEEEECCCCCEEEEECCEEEEECC
RQTTFRRFPDNQVLQTLPVGGYLALHPDRTLLAIGSWGTVWLYDPVSGERQATFNCWPRG
CCHHHHHCCCCHHHHHCCCCCEEEECCCCEEEEEECCCEEEEECCCCCCCEEEEEECCCC
EHVYPMSLAFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQIDSILLADPDAATIIALAFS
CEEEEEEEEECCCCCEEEEEEHHCCCCCEEEEEECCCCCCCCEEEEECCCCEEEEEEEEC
PDGKHLVVGTDASVWLVDVAQRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTATW
CCCCEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCEEECCCCCEEEECCEEEEEEECEEE
QLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQT
EEEEEEECCCCCCCCCHHHHHHHCCCCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCE
IALRNPADGRRKRILSGSPIRLNILMFSPDGEWLLDVGLSDVRAWRVEN
EEEECCCCHHHHEECCCCCEEEEEEEECCCCCEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631732 [H]