| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526598
Identifier: 222526598
GI number: 222526598
Start: 4195974
End: 4196885
Strand: Direct
Name: 222526598
Synonym: Chy400_3366
Alternate gene names: NA
Gene position: 4195974-4196885 (Clockwise)
Preceding gene: 222526597
Following gene: 222526600
Centisome position: 79.64
GC content: 54.82
Gene sequence:
>912_bases ATGACCTTCGTGCTCTCAACCATTGTGGTGGCTTCGATCACCTTTGTCCTGGCATTTATTCTTGCCCCAACCTTTTTCGG TCTGCTCCGTCTGTTCGGCTTCTACACGATTGTGCAGGAGGGTACCTGCCACGTGTACACGCTCTTCGGCAGCGTGGTTG GTGTCTTGCGCGAGCCGGGGCTGGTGATCTTGCCATTCCATTTGGGCGTCAATGCCTTCTTGATCAGCTTCTTTGGTCGG CGGTACGTGATCGATATGCGCCTCGATCAGCGCTATCTACGCAGCCAGCCGGTCAATTCGGAAGAGGGCGCACCAATGGG GATCGGGGTCTGGTACGAGATGTCGATTAGCGATCCGGTAGCCTATCTGTTCAAGAACGCCGATCCACAGGGTTCGCTGG CTGCCAACGTCAGTAATGCCGTGGTACGTACCTTGAGCAACATGCCGTTGGCTCAAATGCTGGAAAATCGCCACGCGATG AGCCAGGCAGTACGAGCTGAGGTTTCACCGAAGGCTTCTGAGTGGGGATACCGGTTGGGATCGGTGTACATTCGGAAAGT GCATTTTCGCGATCAGACAATGATCCGCCAGATCGAAGCGAAGGTCGTTAATCGGCTCCGCCAGGTTACATCGGCAATTT TACAAGATGGTGCCAATCGGGTGAATATTATCACCAGTACTGCCGAACGAAAAGCTGCGATTGAGTTTGCCCGTGCCAAG GCAGTGCGACCGCAGATTTTAGGGCAGGCGCTGGCCCGCATTGGGGCTGACCCCGAAGTACGTGATGCTCTGTTCACTAT CCTCGAACTGCAAAACCTGGCCGAAAGTAAGGCACGAGTCACTCTTGTACCGGCGCAGGCTGAACAACGGATAATGCCCG CTCTAATGGCCGCGCAGGATAGTCGAAAATAG
Upstream 100 bases:
>100_bases TGAAGAGCAACGGTGGCCCTGAGGTCCTGCAGGCCTATCTGCGGAATGTACGGCTTGGTCTCTATCAACAGGCTGAACGG GTAATCATGGAGGTAGAACA
Downstream 100 bases:
>100_bases GGTAATTACTGGAAGAACCTGCTGCCCGTCAGACATGCTTACGGCGGGCAGCAGGTGTATGGGTGGTTGCCATCTGCTAC CTCCACTCCGGCTTTCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Band 7 Family Protein
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTFVLSTIVVASITFVLAFILAPTFFGLLRLFGFYTIVQEGTCHVYTLFGSVVGVLREPGLVILPFHLGVNAFLISFFGR RYVIDMRLDQRYLRSQPVNSEEGAPMGIGVWYEMSISDPVAYLFKNADPQGSLAANVSNAVVRTLSNMPLAQMLENRHAM SQAVRAEVSPKASEWGYRLGSVYIRKVHFRDQTMIRQIEAKVVNRLRQVTSAILQDGANRVNIITSTAERKAAIEFARAK AVRPQILGQALARIGADPEVRDALFTILELQNLAESKARVTLVPAQAEQRIMPALMAAQDSRK
Sequences:
>Translated_303_residues MTFVLSTIVVASITFVLAFILAPTFFGLLRLFGFYTIVQEGTCHVYTLFGSVVGVLREPGLVILPFHLGVNAFLISFFGR RYVIDMRLDQRYLRSQPVNSEEGAPMGIGVWYEMSISDPVAYLFKNADPQGSLAANVSNAVVRTLSNMPLAQMLENRHAM SQAVRAEVSPKASEWGYRLGSVYIRKVHFRDQTMIRQIEAKVVNRLRQVTSAILQDGANRVNIITSTAERKAAIEFARAK AVRPQILGQALARIGADPEVRDALFTILELQNLAESKARVTLVPAQAEQRIMPALMAAQDSRK >Mature_302_residues TFVLSTIVVASITFVLAFILAPTFFGLLRLFGFYTIVQEGTCHVYTLFGSVVGVLREPGLVILPFHLGVNAFLISFFGRR YVIDMRLDQRYLRSQPVNSEEGAPMGIGVWYEMSISDPVAYLFKNADPQGSLAANVSNAVVRTLSNMPLAQMLENRHAMS QAVRAEVSPKASEWGYRLGSVYIRKVHFRDQTMIRQIEAKVVNRLRQVTSAILQDGANRVNIITSTAERKAAIEFARAKA VRPQILGQALARIGADPEVRDALFTILELQNLAESKARVTLVPAQAEQRIMPALMAAQDSRK
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33645; Mature: 33514
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFVLSTIVVASITFVLAFILAPTFFGLLRLFGFYTIVQEGTCHVYTLFGSVVGVLREPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC LVILPFHLGVNAFLISFFGRRYVIDMRLDQRYLRSQPVNSEEGAPMGIGVWYEMSISDPV EEEEEHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHH AYLFKNADPQGSLAANVSNAVVRTLSNMPLAQMLENRHAMSQAVRAEVSPKASEWGYRLG HHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SVYIRKVHFRDQTMIRQIEAKVVNRLRQVTSAILQDGANRVNIITSTAERKAAIEFARAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH AVRPQILGQALARIGADPEVRDALFTILELQNLAESKARVTLVPAQAEQRIMPALMAAQD HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHC SRK CCC >Mature Secondary Structure TFVLSTIVVASITFVLAFILAPTFFGLLRLFGFYTIVQEGTCHVYTLFGSVVGVLREPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC LVILPFHLGVNAFLISFFGRRYVIDMRLDQRYLRSQPVNSEEGAPMGIGVWYEMSISDPV EEEEEHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHH AYLFKNADPQGSLAANVSNAVVRTLSNMPLAQMLENRHAMSQAVRAEVSPKASEWGYRLG HHHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH SVYIRKVHFRDQTMIRQIEAKVVNRLRQVTSAILQDGANRVNIITSTAERKAAIEFARAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH AVRPQILGQALARIGADPEVRDALFTILELQNLAESKARVTLVPAQAEQRIMPALMAAQD HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHC SRK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA