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The map label for this gene is (hspc4-1 [H]

Identifier: 222526600

GI number: 222526600

Start: 4197621

End: 4198052

Strand: Direct

Name: (hspc4-1 [H]

Synonym: Chy400_3368

Alternate gene names: 222526600

Gene position: 4197621-4198052 (Clockwise)

Preceding gene: 222526598

Following gene: 222526601

Centisome position: 79.67

GC content: 59.72

Gene sequence:

>432_bases
ATGACGAACCTGACCCGTTGGGATCCCTTCCGTGAGATGACTCAACTGCTCGACGACACCTTCTTCACCGGCTTCACCGG
TGTGCTGCCCCGCAACGGCAGCCTGGTGCCGGCGCTCGATCTCAGCGAGACGGCTGATGCCTATCACATCGAGATGGCAG
TGCCGGGCATGACCGCCGATCAACTGAACATTACCTTCGAGAACAACGTGCTCACAATTAGTGGCGAGATTACGCAGAGC
AGCGATCGCAAAGAGCGCCAGTATCACGTCACCGAGCGCCGCTTCGGTCGCTTCAGCCGCAGCATTCGCCTGCCCAATCA
GATCCATCCGGATCGGATTGAGGCCCGGCTCGAGAATGGCGTGCTGACGGTGACCGTGCCGAAGGCTGAAGAGATCAAGC
CGCGCAAGATCGCAGTCAACGTCGCCCAATAG

Upstream 100 bases:

>100_bases
TGGTTTGTTATGGTATAGCCAGGCTCGATTGAGAGCACGACCAGTGGAAACAACAAGAAACGATAGACAATAAAAAAACG
AGGATGCAAGGAGGACGACT

Downstream 100 bases:

>100_bases
TCGTCGCACCAGCATCACCGGTTGAAGTCACAGCGCGTGAGGCATAGTTCCTCACGCGCTGTTCTGTTTTCCGGCTACGT
AAATCGAGTACAATAGAAAC

Product: heat shock protein Hsp20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTNLTRWDPFREMTQLLDDTFFTGFTGVLPRNGSLVPALDLSETADAYHIEMAVPGMTADQLNITFENNVLTISGEITQS
SDRKERQYHVTERRFGRFSRSIRLPNQIHPDRIEARLENGVLTVTVPKAEEIKPRKIAVNVAQ

Sequences:

>Translated_143_residues
MTNLTRWDPFREMTQLLDDTFFTGFTGVLPRNGSLVPALDLSETADAYHIEMAVPGMTADQLNITFENNVLTISGEITQS
SDRKERQYHVTERRFGRFSRSIRLPNQIHPDRIEARLENGVLTVTVPKAEEIKPRKIAVNVAQ
>Mature_142_residues
TNLTRWDPFREMTQLLDDTFFTGFTGVLPRNGSLVPALDLSETADAYHIEMAVPGMTADQLNITFENNVLTISGEITQSS
DRKERQYHVTERRFGRFSRSIRLPNQIHPDRIEARLENGVLTVTVPKAEEIKPRKIAVNVAQ

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16272; Mature: 16140

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNLTRWDPFREMTQLLDDTFFTGFTGVLPRNGSLVPALDLSETADAYHIEMAVPGMTAD
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCC
QLNITFENNVLTISGEITQSSDRKERQYHVTERRFGRFSRSIRLPNQIHPDRIEARLENG
EEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
VLTVTVPKAEEIKPRKIAVNVAQ
EEEEEECCCCCCCCEEEEEEECC
>Mature Secondary Structure 
TNLTRWDPFREMTQLLDDTFFTGFTGVLPRNGSLVPALDLSETADAYHIEMAVPGMTAD
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCC
QLNITFENNVLTISGEITQSSDRKERQYHVTERRFGRFSRSIRLPNQIHPDRIEARLENG
EEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
VLTVTVPKAEEIKPRKIAVNVAQ
EEEEEECCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA