Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526569
Identifier: 222526569
GI number: 222526569
Start: 4159221
End: 4159832
Strand: Direct
Name: 222526569
Synonym: Chy400_3337
Alternate gene names: NA
Gene position: 4159221-4159832 (Clockwise)
Preceding gene: 222526568
Following gene: 222526575
Centisome position: 78.94
GC content: 55.72
Gene sequence:
>612_bases ATGAGAGAGAATCCAGAACGGCAGACTAGAGGTACCGATCCCCGACCAGGTGATGCGGCTCAGCGACGTGACACAGCACG TACTGAACGTCTTGACGCCACAGCGTCTGCGCCGCACTGGCGACCGACATCTGCTGTCAGTGGTACTACATACAGCGGCA ATTTTTCCCAGATTTTGATTCGGTGGTTACAACAACGGGGTTGGATGTACCTGATTGGTGGCCTTGTGCTCATCGTCCTG ATTTTTATTCTGTCGCTGTCTCTCCTACGGGGTGATCGTCGAGAAGCACCATTAGGTGTTCCTACTGCCCCCATGCTTGA ACAACCCACAACTGCTACTGATATCCAAAGTGGTACCGGCACCTTAGCTCCCACCGCAGCCCCAACACCCGCTCCGCGCT TCTTTGTGGTCATCAATACTGGCGGTCAGGGTCTCTTCCTCCGCCCTCAACCCAATCGCAACAACCAGCCAATTGCTACG CTTCCTGATGGCACCCGCGTTGAGCAGATCGGCGATGATGTTGTCGGTGCTGATTTTGTCTGGCGACCGGTACGCACCCC CGATGGCCTGGAAGGGTACGTCGCTGTCGATTTTCTTGCCCCGGCTCAGTAA
Upstream 100 bases:
>100_bases GTGTCATAGTCTGCCGCACATCGCTTAGCCATACAGGCTGAGTTGCCAGACAAAGATGTGCTATCATATGTCGGCGATGA GGCGAATGGAGGAGACGTTC
Downstream 100 bases:
>100_bases AACAATGTCAGTTCGTAAGGGCACGGTACGCCGTGCCCTTACCGGCAACTATCAACCCTGGTGGTGTCCCTGTGAGGTGC CGGTAGACACCCCGAAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MRENPERQTRGTDPRPGDAAQRRDTARTERLDATASAPHWRPTSAVSGTTYSGNFSQILIRWLQQRGWMYLIGGLVLIVL IFILSLSLLRGDRREAPLGVPTAPMLEQPTTATDIQSGTGTLAPTAAPTPAPRFFVVINTGGQGLFLRPQPNRNNQPIAT LPDGTRVEQIGDDVVGADFVWRPVRTPDGLEGYVAVDFLAPAQ
Sequences:
>Translated_203_residues MRENPERQTRGTDPRPGDAAQRRDTARTERLDATASAPHWRPTSAVSGTTYSGNFSQILIRWLQQRGWMYLIGGLVLIVL IFILSLSLLRGDRREAPLGVPTAPMLEQPTTATDIQSGTGTLAPTAAPTPAPRFFVVINTGGQGLFLRPQPNRNNQPIAT LPDGTRVEQIGDDVVGADFVWRPVRTPDGLEGYVAVDFLAPAQ >Mature_203_residues MRENPERQTRGTDPRPGDAAQRRDTARTERLDATASAPHWRPTSAVSGTTYSGNFSQILIRWLQQRGWMYLIGGLVLIVL IFILSLSLLRGDRREAPLGVPTAPMLEQPTTATDIQSGTGTLAPTAAPTPAPRFFVVINTGGQGLFLRPQPNRNNQPIAT LPDGTRVEQIGDDVVGADFVWRPVRTPDGLEGYVAVDFLAPAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22110; Mature: 22110
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRENPERQTRGTDPRPGDAAQRRDTARTERLDATASAPHWRPTSAVSGTTYSGNFSQILI CCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RWLQQRGWMYLIGGLVLIVLIFILSLSLLRGDRREAPLGVPTAPMLEQPTTATDIQSGTG HHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TLAPTAAPTPAPRFFVVINTGGQGLFLRPQPNRNNQPIATLPDGTRVEQIGDDVVGADFV CCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEECCCCCCHHHHCCCCCCCCEE WRPVRTPDGLEGYVAVDFLAPAQ EECCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MRENPERQTRGTDPRPGDAAQRRDTARTERLDATASAPHWRPTSAVSGTTYSGNFSQILI CCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH RWLQQRGWMYLIGGLVLIVLIFILSLSLLRGDRREAPLGVPTAPMLEQPTTATDIQSGTG HHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TLAPTAAPTPAPRFFVVINTGGQGLFLRPQPNRNNQPIATLPDGTRVEQIGDDVVGADFV CCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCCEEECCCCCCHHHHCCCCCCCCEE WRPVRTPDGLEGYVAVDFLAPAQ EECCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA