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The map label for this gene is ydeD [C]

Identifier: 222526575

GI number: 222526575

Start: 4164907

End: 4165821

Strand: Direct

Name: ydeD [C]

Synonym: Chy400_3343

Alternate gene names: 222526575

Gene position: 4164907-4165821 (Clockwise)

Preceding gene: 222526569

Following gene: 222526576

Centisome position: 79.05

GC content: 56.07

Gene sequence:

>915_bases
ATGACAACTACTACCACCCGCGTTGAACAGCCGGTTTTGTTTGCCGGTTTGACCCCAACCGATCTGACAATGTTACTTGT
CGTGTTGATCTGGGGTGCTAATTTTAGCATTGTGAAGGCTGCGTTAACCGAAATCCCCCCGCTGGTGTTTGCGACGTTAC
GCTTTACGAGTGCGAGTGTGCTTTTAGTGGGCTTTATGTTTTGGCGTGAAGGGAAGCGAGCACTCCCTGATCGGCGCACG
TTCTGGAAGTTGACCTGGATTGGTGTGGTCGGCAATACAATCTATCAGGCGCTCTTCACGTATAGTTTGACCATGACCAC
GGCAGCGAACGGTTCGCTGATTATTGCTACAACGCCGGCGCTGGTTGCTTTGGCGGCAGCGTTGCTCGGTATTGAGCGGA
TCCGTCGCGTTATGGCAGTTGGGATTGCGCTGGCGATTAGCGGGGTGGCGTTGGTGGTGGCCGAACGTGGTCTGAGTCTC
GGTGGTCAGGGATTGCTGGGTGATCTACTGATGCTCGGTGCTGCATTCTGCTGGATGATGTACACCCTCGGCGTCCGTAC
TCTCGGTCAGGGTCTATCTCCACTGGCTATCACAACCTGGACGATGGTAACCGGTGTGCCGGGCATGATCTTGATTAGCC
TGCCGGATTGGTCAACAGTTGTCTGGGATCAGGTGAGCCTGCAAGCGTGGCTTGCACTGGCATATTCGACGTTACTGGCA
CTGGTGCTGGCCTATGTCCTTTGGAATAACAGTGTGCGTGTGGCCGGCAGTGCACGCACGGCGATCTACGGCTGCGCCAT
TCCGCTCGTAGCAACCCTTATTGCCTGGCCGCTCATCGGTGAACAGCCGACATGGGTGCAGGGTATTGGTGGCTTGCTGA
TCGTCAGCGGGGTCTTGCTGACCCGTCGTCCGTGA

Upstream 100 bases:

>100_bases
TCCTTTGACAAGCCAAATATCCGTCTGGAGATGCTGGTCATGACAGATATATTTGTGGTACCTTACCCACGTAAGCTGCA
TCTCTGGAAGCCGAGGATGT

Downstream 100 bases:

>100_bases
CCGGTGTCGTTTCTCGTGGTACTATACTAGAATGTAAATCTTTGCAACCGCCGGTACTCGGTCAGCGGTTCGTCGTGTGT
TCAGGTTATCAATGGTAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTTTTTRVEQPVLFAGLTPTDLTMLLVVLIWGANFSIVKAALTEIPPLVFATLRFTSASVLLVGFMFWREGKRALPDRRT
FWKLTWIGVVGNTIYQALFTYSLTMTTAANGSLIIATTPALVALAAALLGIERIRRVMAVGIALAISGVALVVAERGLSL
GGQGLLGDLLMLGAAFCWMMYTLGVRTLGQGLSPLAITTWTMVTGVPGMILISLPDWSTVVWDQVSLQAWLALAYSTLLA
LVLAYVLWNNSVRVAGSARTAIYGCAIPLVATLIAWPLIGEQPTWVQGIGGLLIVSGVLLTRRP

Sequences:

>Translated_304_residues
MTTTTTRVEQPVLFAGLTPTDLTMLLVVLIWGANFSIVKAALTEIPPLVFATLRFTSASVLLVGFMFWREGKRALPDRRT
FWKLTWIGVVGNTIYQALFTYSLTMTTAANGSLIIATTPALVALAAALLGIERIRRVMAVGIALAISGVALVVAERGLSL
GGQGLLGDLLMLGAAFCWMMYTLGVRTLGQGLSPLAITTWTMVTGVPGMILISLPDWSTVVWDQVSLQAWLALAYSTLLA
LVLAYVLWNNSVRVAGSARTAIYGCAIPLVATLIAWPLIGEQPTWVQGIGGLLIVSGVLLTRRP
>Mature_303_residues
TTTTTRVEQPVLFAGLTPTDLTMLLVVLIWGANFSIVKAALTEIPPLVFATLRFTSASVLLVGFMFWREGKRALPDRRTF
WKLTWIGVVGNTIYQALFTYSLTMTTAANGSLIIATTPALVALAAALLGIERIRRVMAVGIALAISGVALVVAERGLSLG
GQGLLGDLLMLGAAFCWMMYTLGVRTLGQGLSPLAITTWTMVTGVPGMILISLPDWSTVVWDQVSLQAWLALAYSTLLAL
VLAYVLWNNSVRVAGSARTAIYGCAIPLVATLIAWPLIGEQPTWVQGIGGLLIVSGVLLTRRP

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32532; Mature: 32401

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTTTRVEQPVLFAGLTPTDLTMLLVVLIWGANFSIVKAALTEIPPLVFATLRFTSASV
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
LLVGFMFWREGKRALPDRRTFWKLTWIGVVGNTIYQALFTYSLTMTTAANGSLIIATTPA
HHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECHH
LVALAAALLGIERIRRVMAVGIALAISGVALVVAERGLSLGGQGLLGDLLMLGAAFCWMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YTLGVRTLGQGLSPLAITTWTMVTGVPGMILISLPDWSTVVWDQVSLQAWLALAYSTLLA
HHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LVLAYVLWNNSVRVAGSARTAIYGCAIPLVATLIAWPLIGEQPTWVQGIGGLLIVSGVLL
HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH
TRRP
CCCC
>Mature Secondary Structure 
TTTTTRVEQPVLFAGLTPTDLTMLLVVLIWGANFSIVKAALTEIPPLVFATLRFTSASV
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHH
LLVGFMFWREGKRALPDRRTFWKLTWIGVVGNTIYQALFTYSLTMTTAANGSLIIATTPA
HHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHEEEECCCCCEEEEECHH
LVALAAALLGIERIRRVMAVGIALAISGVALVVAERGLSLGGQGLLGDLLMLGAAFCWMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YTLGVRTLGQGLSPLAITTWTMVTGVPGMILISLPDWSTVVWDQVSLQAWLALAYSTLLA
HHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
LVLAYVLWNNSVRVAGSARTAIYGCAIPLVATLIAWPLIGEQPTWVQGIGGLLIVSGVLL
HHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH
TRRP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]