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The map label for this gene is ybbK [C]

Identifier: 222526545

GI number: 222526545

Start: 4127529

End: 4128341

Strand: Direct

Name: ybbK [C]

Synonym: Chy400_3312

Alternate gene names: 222526545

Gene position: 4127529-4128341 (Clockwise)

Preceding gene: 222526544

Following gene: 222526550

Centisome position: 78.34

GC content: 55.35

Gene sequence:

>813_bases
ATGGGAAGTGCAACGTTCTTTGTACTGGCCTGTCTGGCGGTACTTGCCTTTATTGCCCTGATGATTCTGTTGTCGGCAAT
CAAAATTGTGCCTGAATATGAGCGTGGGGTGATCTTCCGTCTGGGTCGGTTGATGGGGCCGCGAGGGCCGGGTATCTTCT
TTGTGATTCCGGTGTTCGAGCGGATGGTACGGGTAGATATGCGGGTGATCACGATGGACGTGCCGGTTCAGGAGGTGATT
ACACTTGACAACGTCACGATTAAGGTGAATGCGGTGCTCTATTTCCAGGTGATCAATCCGAACTGGGCAGTGACAAAGGT
GATGGACTATATCCGGGCGACAATGCAAATCGCGCAGACGACGCTCCGCAGTGTTGTTGGTCAGGTCGAGCTTGACGAAT
TGCTGGCGCAACGCGAGAAGATTAATCAGAAGTTGCAGCAGATTATTGACGAGCAGACCGAGCCGTGGGGGATTAAGGTG
ACGATTGTGGAGGTGAAGGACGTGGAGCTGCCGCAGAACATGCAGCGGGCGATGGCGCGTCAGGCCGAAGCCGAGCGTGA
GAAGCGGGCCAAGCTGATCCACGCCGATGGTGAGTTGCAGGCGTCGCGTACACTTGCGGAGGCAGCGCGAGTGCTGGCCA
GTGAACCGACGACGTTGCAGTTGCGCTATTTGCAGACGTTGACCGAGATCGCTACCGAGAAGAACAGTACGATTATCTTC
CCGCTGCCGATTGATATGCTCAAGACCTTCCTGGCGTCAAACAACGGGGCTACCAGTGATGAGCGGCGGATTGTCCGGAG
TGAAGAGGCATAA

Upstream 100 bases:

>100_bases
CGGTGCGGCGGATTGATACCGGCGAATCTTCGCCGCCACAATTGTGAGTGTGGCGTGTCATGACTCTTATCACAAGCTTG
GGATAGAAAGGAGCAGGACT

Downstream 100 bases:

>100_bases
CCGTACAGGGGATAGGGGCGAAGCGTACTTCGCCCCTATTTGCGCGCAATGATGGCGATGCTGGCAATGAGAAGGATGGC
TCCGACAATGCCGGTAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MGSATFFVLACLAVLAFIALMILLSAIKIVPEYERGVIFRLGRLMGPRGPGIFFVIPVFERMVRVDMRVITMDVPVQEVI
TLDNVTIKVNAVLYFQVINPNWAVTKVMDYIRATMQIAQTTLRSVVGQVELDELLAQREKINQKLQQIIDEQTEPWGIKV
TIVEVKDVELPQNMQRAMARQAEAEREKRAKLIHADGELQASRTLAEAARVLASEPTTLQLRYLQTLTEIATEKNSTIIF
PLPIDMLKTFLASNNGATSDERRIVRSEEA

Sequences:

>Translated_270_residues
MGSATFFVLACLAVLAFIALMILLSAIKIVPEYERGVIFRLGRLMGPRGPGIFFVIPVFERMVRVDMRVITMDVPVQEVI
TLDNVTIKVNAVLYFQVINPNWAVTKVMDYIRATMQIAQTTLRSVVGQVELDELLAQREKINQKLQQIIDEQTEPWGIKV
TIVEVKDVELPQNMQRAMARQAEAEREKRAKLIHADGELQASRTLAEAARVLASEPTTLQLRYLQTLTEIATEKNSTIIF
PLPIDMLKTFLASNNGATSDERRIVRSEEA
>Mature_269_residues
GSATFFVLACLAVLAFIALMILLSAIKIVPEYERGVIFRLGRLMGPRGPGIFFVIPVFERMVRVDMRVITMDVPVQEVIT
LDNVTIKVNAVLYFQVINPNWAVTKVMDYIRATMQIAQTTLRSVVGQVELDELLAQREKINQKLQQIIDEQTEPWGIKVT
IVEVKDVELPQNMQRAMARQAEAEREKRAKLIHADGELQASRTLAEAARVLASEPTTLQLRYLQTLTEIATEKNSTIIFP
LPIDMLKTFLASNNGATSDERRIVRSEEA

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI38016911, Length=232, Percent_Identity=52.5862068965517, Blast_Score=232, Evalue=3e-61,
Organism=Homo sapiens, GI21686995, Length=260, Percent_Identity=45.3846153846154, Blast_Score=216, Evalue=1e-56,
Organism=Homo sapiens, GI221316744, Length=260, Percent_Identity=45.3846153846154, Blast_Score=216, Evalue=1e-56,
Organism=Homo sapiens, GI7657615, Length=264, Percent_Identity=35.2272727272727, Blast_Score=177, Evalue=1e-44,
Organism=Homo sapiens, GI7305503, Length=190, Percent_Identity=36.8421052631579, Blast_Score=132, Evalue=4e-31,
Organism=Homo sapiens, GI20149563, Length=163, Percent_Identity=31.9018404907975, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI38016907, Length=65, Percent_Identity=60, Blast_Score=84, Evalue=2e-16,
Organism=Escherichia coli, GI1786697, Length=204, Percent_Identity=38.7254901960784, Blast_Score=149, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71987612, Length=247, Percent_Identity=53.8461538461538, Blast_Score=245, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI25153583, Length=247, Percent_Identity=53.8461538461538, Blast_Score=245, Evalue=2e-65,
Organism=Caenorhabditis elegans, GI71987621, Length=247, Percent_Identity=53.8461538461538, Blast_Score=242, Evalue=1e-64,
Organism=Caenorhabditis elegans, GI17569493, Length=260, Percent_Identity=47.3076923076923, Blast_Score=231, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI17569499, Length=248, Percent_Identity=50.8064516129032, Blast_Score=230, Evalue=7e-61,
Organism=Caenorhabditis elegans, GI193209764, Length=248, Percent_Identity=48.3870967741936, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17569497, Length=252, Percent_Identity=46.031746031746, Blast_Score=216, Evalue=9e-57,
Organism=Caenorhabditis elegans, GI17570459, Length=241, Percent_Identity=46.8879668049792, Blast_Score=216, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI193210507, Length=258, Percent_Identity=46.8992248062016, Blast_Score=211, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI17570161, Length=258, Percent_Identity=46.8992248062016, Blast_Score=211, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI71989948, Length=232, Percent_Identity=48.2758620689655, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI32566490, Length=238, Percent_Identity=48.7394957983193, Blast_Score=197, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI71989955, Length=183, Percent_Identity=49.1803278688525, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI32564147, Length=196, Percent_Identity=36.2244897959184, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71989963, Length=121, Percent_Identity=50.4132231404959, Blast_Score=122, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17542664, Length=172, Percent_Identity=27.906976744186, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI45556022, Length=254, Percent_Identity=50.3937007874016, Blast_Score=236, Evalue=9e-63,
Organism=Drosophila melanogaster, GI18860517, Length=249, Percent_Identity=49.7991967871486, Blast_Score=231, Evalue=5e-61,
Organism=Drosophila melanogaster, GI24657857, Length=258, Percent_Identity=51.1627906976744, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI62484448, Length=258, Percent_Identity=51.1627906976744, Blast_Score=229, Evalue=2e-60,
Organism=Drosophila melanogaster, GI281365664, Length=258, Percent_Identity=51.1627906976744, Blast_Score=228, Evalue=2e-60,
Organism=Drosophila melanogaster, GI62484274, Length=258, Percent_Identity=51.1627906976744, Blast_Score=228, Evalue=4e-60,
Organism=Drosophila melanogaster, GI281361631, Length=231, Percent_Identity=43.7229437229437, Blast_Score=201, Evalue=5e-52,
Organism=Drosophila melanogaster, GI281361633, Length=231, Percent_Identity=43.7229437229437, Blast_Score=201, Evalue=5e-52,
Organism=Drosophila melanogaster, GI28573263, Length=249, Percent_Identity=38.9558232931727, Blast_Score=194, Evalue=4e-50,
Organism=Drosophila melanogaster, GI21356845, Length=254, Percent_Identity=37.7952755905512, Blast_Score=188, Evalue=3e-48,
Organism=Drosophila melanogaster, GI281361635, Length=186, Percent_Identity=42.4731182795699, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI45550506, Length=194, Percent_Identity=37.1134020618557, Blast_Score=132, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 30440; Mature: 30309

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSATFFVLACLAVLAFIALMILLSAIKIVPEYERGVIFRLGRLMGPRGPGIFFVIPVFE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHH
RMVRVDMRVITMDVPVQEVITLDNVTIKVNAVLYFQVINPNWAVTKVMDYIRATMQIAQT
HHHHHHHHEEEECCCHHHHHEECCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
TLRSVVGQVELDELLAQREKINQKLQQIIDEQTEPWGIKVTIVEVKDVELPQNMQRAMAR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHH
QAEAEREKRAKLIHADGELQASRTLAEAARVLASEPTTLQLRYLQTLTEIATEKNSTIIF
HHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEE
PLPIDMLKTFLASNNGATSDERRIVRSEEA
ECCHHHHHHHHHCCCCCCCHHHHHHCCCCC
>Mature Secondary Structure 
GSATFFVLACLAVLAFIALMILLSAIKIVPEYERGVIFRLGRLMGPRGPGIFFVIPVFE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHH
RMVRVDMRVITMDVPVQEVITLDNVTIKVNAVLYFQVINPNWAVTKVMDYIRATMQIAQT
HHHHHHHHEEEECCCHHHHHEECCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
TLRSVVGQVELDELLAQREKINQKLQQIIDEQTEPWGIKVTIVEVKDVELPQNMQRAMAR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHH
QAEAEREKRAKLIHADGELQASRTLAEAARVLASEPTTLQLRYLQTLTEIATEKNSTIIF
HHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCEEEE
PLPIDMLKTFLASNNGATSDERRIVRSEEA
ECCHHHHHHHHHCCCCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]