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The map label for this gene is 222526544

Identifier: 222526544

GI number: 222526544

Start: 4126165

End: 4127475

Strand: Direct

Name: 222526544

Synonym: Chy400_3311

Alternate gene names: NA

Gene position: 4126165-4127475 (Clockwise)

Preceding gene: 222526543

Following gene: 222526545

Centisome position: 78.31

GC content: 56.75

Gene sequence:

>1311_bases
ATGCTCGTTGGGCTGCTATGGATGCTGTTGGCAACCGGTGTGGCAGCTCAATCGGTACAACCGATTTATTTCGTCGAGTA
CGATGGCGTGCTGAGTAGCTATGCTGCCGGGTATCTTCGCCGTGCGCTGCGTGAGGCGGAGGCGGCGAATGCCCAGGCGC
TGATTGTCCAGCTTACGCCACGTGGTGCGGTTATGCAAGAGGCACGCACGCTGGCGGGAGAGATTGCCGAAGCGAAGGTG
CCGGTTGTTGTGTTTATCAGTCCAGCCGGTCACGATGCCGGTGCTGCCGGAACGTGGTTACTGGCGGCGGCGCATGTTGC
GGCAATGGCTCCAGAGAGCCAGTTTGGGATTGCGGCACCGTTGTTCGTCCCTGCAATGGGGGTGAGCGAAACGACCCAGG
AACTTTTGCTTAACGAGCAATTACAGCAGTTTGAAGAATGGGGTGCAGCCCGTCAACGGGATGTGAGTTGGGCTGATGTT
GCCTTACGCAGTGGATTTATTGCAACCGCAGCGCAGGCTATCGAGGGTTCACCGCCGATCATCGACATTGTTGCGCGTGA
TGTAGACGAGCTTCTGCTGCGGCTGGAAGGACGTGTCATTACCCTCGCTGATGGCTCTCAGGTCACACTGGCAACGCTTG
GGGGACGGCCACGGGTCGTTGAAGTGAATCTTATCGAGGCAGTTTTGCTGGTTCTGGCCAACCCGACCGTTGTCTTTATC
CTGTTGATTATGGCCGGGCTGGCTTTTTATGCAGAGTTTCTCAGTCCAACTGTTGGTATTCTGGCCGGTTTAGGTGTGAT
CTTGCTGGCCGGCGCGATTGTGGGCATGATTGCCTTGCCGGTGCAGTGGCTCAGTGTGTTGGGTATTCTTATCGCCTTTG
GTCTGGTAGCGGCGGATCTCTTTGTGCCATCGCATGGTACGTTGACAGTCATTGGGGTGGGCATTATGATCGCCAGCTCA
TTAACGCTCTTCGATCAAGTACAGGCACCTGGGGTTACGGTAGCCTTGTGGGCGGTCATTCTGGTGGCAGTGTTGATTGC
AATCTTTGCGATTAGTGGGGTCTGGCTGGCGTTACGTTCCCGGAACCGTCCGGTCACGACCGGTCAAGAGGGTCTGATCG
GTCGGTTAGCTGAGGTGCGCAAACGGCTCGATCCAGAGGGTATGGTCTTCGTGGAAGGTGCGCTCTGGCGGGCGGTATGC
GAAAATGGAACTGCTGAGGAAGGTGAATTTGTGCGCGTCACCGGTATCTATGCTCTGCGGTTGACGGTGCGGCGGATTGA
TACCGGCGAATCTTCGCCGCCACAATTGTGA

Upstream 100 bases:

>100_bases
AGGTTTGTACGTCTATATGAGATACTGTTTCAGACAAGGCCGTTTACACCTTGATGGCAACACCACTGATCGAGGATTGG
TGACCTGGATATACCGGTTA

Downstream 100 bases:

>100_bases
GTGTGGCGTGTCATGACTCTTATCACAAGCTTGGGATAGAAAGGAGCAGGACTATGGGAAGTGCAACGTTCTTTGTACTG
GCCTGTCTGGCGGTACTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulation Efficiency Protein NfeD; Nodulation Efficiency Protein D; NfeD Protein; Nodulation Competitiveness Protein NfeD; Nodulation Protein NfeD; Membrane Bound Peptidase; Nodulation Efficiency Family Protein; Membrane-Bound Serine Protease ClpP Class; Transmembrane Protein; NfeD Family Protein; Serine Protease; Membrane-Bound Protease; NfeD-Like Family; Protease/Transporter; Membrane-Bound ClpP-Class Protease; S49 Family Serine Protease; Membrane-Bound Serine Protease NfeD-Like Protein; NfeD-Like Membrane-Bound Serine Protease; Nfed Family Protein; Membrane-Bound Serine Protease Protein

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MLVGLLWMLLATGVAAQSVQPIYFVEYDGVLSSYAAGYLRRALREAEAANAQALIVQLTPRGAVMQEARTLAGEIAEAKV
PVVVFISPAGHDAGAAGTWLLAAAHVAAMAPESQFGIAAPLFVPAMGVSETTQELLLNEQLQQFEEWGAARQRDVSWADV
ALRSGFIATAAQAIEGSPPIIDIVARDVDELLLRLEGRVITLADGSQVTLATLGGRPRVVEVNLIEAVLLVLANPTVVFI
LLIMAGLAFYAEFLSPTVGILAGLGVILLAGAIVGMIALPVQWLSVLGILIAFGLVAADLFVPSHGTLTVIGVGIMIASS
LTLFDQVQAPGVTVALWAVILVAVLIAIFAISGVWLALRSRNRPVTTGQEGLIGRLAEVRKRLDPEGMVFVEGALWRAVC
ENGTAEEGEFVRVTGIYALRLTVRRIDTGESSPPQL

Sequences:

>Translated_436_residues
MLVGLLWMLLATGVAAQSVQPIYFVEYDGVLSSYAAGYLRRALREAEAANAQALIVQLTPRGAVMQEARTLAGEIAEAKV
PVVVFISPAGHDAGAAGTWLLAAAHVAAMAPESQFGIAAPLFVPAMGVSETTQELLLNEQLQQFEEWGAARQRDVSWADV
ALRSGFIATAAQAIEGSPPIIDIVARDVDELLLRLEGRVITLADGSQVTLATLGGRPRVVEVNLIEAVLLVLANPTVVFI
LLIMAGLAFYAEFLSPTVGILAGLGVILLAGAIVGMIALPVQWLSVLGILIAFGLVAADLFVPSHGTLTVIGVGIMIASS
LTLFDQVQAPGVTVALWAVILVAVLIAIFAISGVWLALRSRNRPVTTGQEGLIGRLAEVRKRLDPEGMVFVEGALWRAVC
ENGTAEEGEFVRVTGIYALRLTVRRIDTGESSPPQL
>Mature_436_residues
MLVGLLWMLLATGVAAQSVQPIYFVEYDGVLSSYAAGYLRRALREAEAANAQALIVQLTPRGAVMQEARTLAGEIAEAKV
PVVVFISPAGHDAGAAGTWLLAAAHVAAMAPESQFGIAAPLFVPAMGVSETTQELLLNEQLQQFEEWGAARQRDVSWADV
ALRSGFIATAAQAIEGSPPIIDIVARDVDELLLRLEGRVITLADGSQVTLATLGGRPRVVEVNLIEAVLLVLANPTVVFI
LLIMAGLAFYAEFLSPTVGILAGLGVILLAGAIVGMIALPVQWLSVLGILIAFGLVAADLFVPSHGTLTVIGVGIMIASS
LTLFDQVQAPGVTVALWAVILVAVLIAIFAISGVWLALRSRNRPVTTGQEGLIGRLAEVRKRLDPEGMVFVEGALWRAVC
ENGTAEEGEFVRVTGIYALRLTVRRIDTGESSPPQL

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46007; Mature: 46007

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVGLLWMLLATGVAAQSVQPIYFVEYDGVLSSYAAGYLRRALREAEAANAQALIVQLTP
CHHHHHHHHHHCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
RGAVMQEARTLAGEIAEAKVPVVVFISPAGHDAGAAGTWLLAAAHVAAMAPESQFGIAAP
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
LFVPAMGVSETTQELLLNEQLQQFEEWGAARQRDVSWADVALRSGFIATAAQAIEGSPPI
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCC
IDIVARDVDELLLRLEGRVITLADGSQVTLATLGGRPRVVEVNLIEAVLLVLANPTVVFI
HHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHH
LLIMAGLAFYAEFLSPTVGILAGLGVILLAGAIVGMIALPVQWLSVLGILIAFGLVAADL
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVPSHGTLTVIGVGIMIASSLTLFDQVQAPGVTVALWAVILVAVLIAIFAISGVWLALRS
HCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RNRPVTTGQEGLIGRLAEVRKRLDPEGMVFVEGALWRAVCENGTAEEGEFVRVTGIYALR
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCCCCEEEEEEEEEEE
LTVRRIDTGESSPPQL
EEEEEECCCCCCCCCC
>Mature Secondary Structure
MLVGLLWMLLATGVAAQSVQPIYFVEYDGVLSSYAAGYLRRALREAEAANAQALIVQLTP
CHHHHHHHHHHCCHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC
RGAVMQEARTLAGEIAEAKVPVVVFISPAGHDAGAAGTWLLAAAHVAAMAPESQFGIAAP
CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCH
LFVPAMGVSETTQELLLNEQLQQFEEWGAARQRDVSWADVALRSGFIATAAQAIEGSPPI
HHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHCCHHHHHHHHHCCCCCC
IDIVARDVDELLLRLEGRVITLADGSQVTLATLGGRPRVVEVNLIEAVLLVLANPTVVFI
HHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCEEEEHHHHHHHHHHHCCHHHHHH
LLIMAGLAFYAEFLSPTVGILAGLGVILLAGAIVGMIALPVQWLSVLGILIAFGLVAADL
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVPSHGTLTVIGVGIMIASSLTLFDQVQAPGVTVALWAVILVAVLIAIFAISGVWLALRS
HCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
RNRPVTTGQEGLIGRLAEVRKRLDPEGMVFVEGALWRAVCENGTAEEGEFVRVTGIYALR
CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCCCCCCCEEEEEEEEEEE
LTVRRIDTGESSPPQL
EEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA