Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526539
Identifier: 222526539
GI number: 222526539
Start: 4120430
End: 4121266
Strand: Direct
Name: 222526539
Synonym: Chy400_3306
Alternate gene names: NA
Gene position: 4120430-4121266 (Clockwise)
Preceding gene: 222526538
Following gene: 222526540
Centisome position: 78.2
GC content: 56.27
Gene sequence:
>837_bases ATGCTCAGCCTGTTTTGGCATGAATTGCGTATGCGGCGTATGCTGTTGATCGGCTGGGGCAGTGGCCTGCTGGTCTTTTT CAGTGTCTACCTGGCGTTTTATCCAGCTTTGCCCGCTGAAATGCGTAACCTCGATTTGCAGGCGATTGAACTGTACCGGG CATTTGGTAATCTCAGCATGGCTACCTTTGAGGGGTATATTGGCTCGACCATCTTCCACTTTTTTAGTGTCCTGATCGGA GTGTTAGCCATTGTCACCGGCACCGGTGTGCTGGCAGGTGAAGAAGATGCCGGTACGCTCGAATTGCAAATGGCGCTGCC GCTGACACGCTGGCAACTGGTGACGGCGAAGGTGTTGGAACTGGCAGCCATTGCGCTGGTTGTGTTGACGATGGCTGGCA TCGCTGCCGCGCTGGTCTTTCTGGCGATTCGCTCTCAGCTCACCACTAATCTCGATGCCGGCGACCTCTTTCGTGCGGTC ATCGCGCACTGGCCATTGGTTTTTCTCTTCCAAATGATTAGTTTGTGGTTGGGCACGGTGACCCCCTCGCGACGGGTGGC GCTGGCGCTGGCAGCGGTTGTGCTGGTGGTGAGTTTTCTTGGCTACAACCTGGTCGGTATGTCGCCTGATCTGGAGTGGT TGCAGCCATTGTCGCCATTTCACTATCGCCCTTCAACGCCTGACGCCCTAGACGGTGGGCCGGCAGCGAGTGATCTGCTG GTATTGAGTGGTGCAGCGCTGGTGTTCTATTTGCTGGCAATCGTGAGCTTTGAGCAGCGTGATGTTACGGTTGGAGCCTG GCTTTGGACGAGGCTGGTGAGACGGCGGGTGGTATGA
Upstream 100 bases:
>100_bases CTACGGATCGCCGCCGAGCAAGCAGTGATCGAACTGGAGACGATCCCGCTTACGCTGGAAGAGGTCTTTCTGGCCTACTA CGGTGGACAAGGAGAAAACC
Downstream 100 bases:
>100_bases GGTTGCATTGATCGGCAGGACGGCGTCGCTATGCCGGGCTAGAGAGGATCAAGATTGTCGGCTCAATCCTTGTCGCTCAC CTTGAGAAAGTTAGGTGTGT
Product: putative ABC transporter permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MLSLFWHELRMRRMLLIGWGSGLLVFFSVYLAFYPALPAEMRNLDLQAIELYRAFGNLSMATFEGYIGSTIFHFFSVLIG VLAIVTGTGVLAGEEDAGTLELQMALPLTRWQLVTAKVLELAAIALVVLTMAGIAAALVFLAIRSQLTTNLDAGDLFRAV IAHWPLVFLFQMISLWLGTVTPSRRVALALAAVVLVVSFLGYNLVGMSPDLEWLQPLSPFHYRPSTPDALDGGPAASDLL VLSGAALVFYLLAIVSFEQRDVTVGAWLWTRLVRRRVV
Sequences:
>Translated_278_residues MLSLFWHELRMRRMLLIGWGSGLLVFFSVYLAFYPALPAEMRNLDLQAIELYRAFGNLSMATFEGYIGSTIFHFFSVLIG VLAIVTGTGVLAGEEDAGTLELQMALPLTRWQLVTAKVLELAAIALVVLTMAGIAAALVFLAIRSQLTTNLDAGDLFRAV IAHWPLVFLFQMISLWLGTVTPSRRVALALAAVVLVVSFLGYNLVGMSPDLEWLQPLSPFHYRPSTPDALDGGPAASDLL VLSGAALVFYLLAIVSFEQRDVTVGAWLWTRLVRRRVV >Mature_278_residues MLSLFWHELRMRRMLLIGWGSGLLVFFSVYLAFYPALPAEMRNLDLQAIELYRAFGNLSMATFEGYIGSTIFHFFSVLIG VLAIVTGTGVLAGEEDAGTLELQMALPLTRWQLVTAKVLELAAIALVVLTMAGIAAALVFLAIRSQLTTNLDAGDLFRAV IAHWPLVFLFQMISLWLGTVTPSRRVALALAAVVLVVSFLGYNLVGMSPDLEWLQPLSPFHYRPSTPDALDGGPAASDLL VLSGAALVFYLLAIVSFEQRDVTVGAWLWTRLVRRRVV
Specific function: Unknown
COG id: COG1277
COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30559; Mature: 30559
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLFWHELRMRRMLLIGWGSGLLVFFSVYLAFYPALPAEMRNLDLQAIELYRAFGNLSM CCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCHH ATFEGYIGSTIFHFFSVLIGVLAIVTGTGVLAGEEDAGTLELQMALPLTRWQLVTAKVLE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCHHHHHHHHHHHHH LAAIALVVLTMAGIAAALVFLAIRSQLTTNLDAGDLFRAVIAHWPLVFLFQMISLWLGTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPSRRVALALAAVVLVVSFLGYNLVGMSPDLEWLQPLSPFHYRPSTPDALDGGPAASDLL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH VLSGAALVFYLLAIVSFEQRDVTVGAWLWTRLVRRRVV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLSLFWHELRMRRMLLIGWGSGLLVFFSVYLAFYPALPAEMRNLDLQAIELYRAFGNLSM CCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCHH ATFEGYIGSTIFHFFSVLIGVLAIVTGTGVLAGEEDAGTLELQMALPLTRWQLVTAKVLE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEECCHHHHHHHHHHHHH LAAIALVVLTMAGIAAALVFLAIRSQLTTNLDAGDLFRAVIAHWPLVFLFQMISLWLGTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC TPSRRVALALAAVVLVVSFLGYNLVGMSPDLEWLQPLSPFHYRPSTPDALDGGPAASDLL CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH VLSGAALVFYLLAIVSFEQRDVTVGAWLWTRLVRRRVV HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA