| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526473
Identifier: 222526473
GI number: 222526473
Start: 4039185
End: 4040072
Strand: Direct
Name: 222526473
Synonym: Chy400_3240
Alternate gene names: NA
Gene position: 4039185-4040072 (Clockwise)
Preceding gene: 222526472
Following gene: 222526474
Centisome position: 76.66
GC content: 54.73
Gene sequence:
>888_bases ATGGTACCGTCCTTTATCCGCACCGGCAGGCAACCAACAATCCTCCTTGTTGTGATCATACTGGTGATCGTTATAGGTGG CACTGCTCTCGTCACCTGGATGAGCCGTCGCTCGCCAGTTGCCCCGTTGGTGGCGCCCACAGCGTCAGTGACATCACTCC CGCCATCGCCCACCGCTATCAGGAGTGTGGACAGTCAATCTCCCTCATCCGACACTGTGTCCGTGACGCAGACCGCTCAG GCGCGCACGGCCCAGGCGCTGGTGCAAATGGCTGCTACGCAAACAGCCACGGCACTGCAAGCTGAATTAACAGCCCTTTT TGCCGATGCTCAGCGCGTCTTCTACGATGAATTTGTTGATAACCGCAATGCCTGGTTTACCGGTGTCTTCCAGGACATTG AGCTTAACCTGATCGAAGATGGGGTTTTTAAGGTATTATGGTCAGGCAAGGATACGTCATACGAAGTGTACGAATTGAGT TCATTCACCGACTTTATCGGTGAAGTTGATTGCCGGATTGCTCGTGGCGGCGGTGACGGGAGTTGCGGCCTGATCTTTGC CCAACAACGCAACGTTGGTTTCTACAAGTTTGAGTTTTTTATCGACTACTATCGTCTCTCCATCATCCTGGCAGAAGGTG AGCCGGTCATCCTGGCAGAAGGCGACCCGCGCCGTATCACGACGGTAGGCGATCAAAATCGGTTACGGGTGATCAGACAG GGTGAGCGGATTCGGCTGTTTATCAACGATGCGCTGGCTGCCGATCTGCGCGACAATACCCTGGGTGCAGGGCGGGTAGG TGTCTCGACGGCCTGTTACAATGCTGAAGGTGGGGTCGAAGTCCATTTCGACAATTTCGGTATCTGGTCGCTGGCATCAG GTTCGTGA
Upstream 100 bases:
>100_bases ATGCAGTTCAGCAGTGCCACACGATGCACAGGTATGCCCTCACTGTGGCACGCAACTATCGAACAAAACAACATCTCCAA CTGACGCGGCGTTATCAGCA
Downstream 100 bases:
>100_bases AAGGGTAACCGATGCAATCACCATTTCCCCATCTGCTTGAGGAGTTTGTCGTTGTCACCGCCCCGATGGAACGGGTTGAG CGAGTGATAACCGACGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MVPSFIRTGRQPTILLVVIILVIVIGGTALVTWMSRRSPVAPLVAPTASVTSLPPSPTAIRSVDSQSPSSDTVSVTQTAQ ARTAQALVQMAATQTATALQAELTALFADAQRVFYDEFVDNRNAWFTGVFQDIELNLIEDGVFKVLWSGKDTSYEVYELS SFTDFIGEVDCRIARGGGDGSCGLIFAQQRNVGFYKFEFFIDYYRLSIILAEGEPVILAEGDPRRITTVGDQNRLRVIRQ GERIRLFINDALAADLRDNTLGAGRVGVSTACYNAEGGVEVHFDNFGIWSLASGS
Sequences:
>Translated_295_residues MVPSFIRTGRQPTILLVVIILVIVIGGTALVTWMSRRSPVAPLVAPTASVTSLPPSPTAIRSVDSQSPSSDTVSVTQTAQ ARTAQALVQMAATQTATALQAELTALFADAQRVFYDEFVDNRNAWFTGVFQDIELNLIEDGVFKVLWSGKDTSYEVYELS SFTDFIGEVDCRIARGGGDGSCGLIFAQQRNVGFYKFEFFIDYYRLSIILAEGEPVILAEGDPRRITTVGDQNRLRVIRQ GERIRLFINDALAADLRDNTLGAGRVGVSTACYNAEGGVEVHFDNFGIWSLASGS >Mature_295_residues MVPSFIRTGRQPTILLVVIILVIVIGGTALVTWMSRRSPVAPLVAPTASVTSLPPSPTAIRSVDSQSPSSDTVSVTQTAQ ARTAQALVQMAATQTATALQAELTALFADAQRVFYDEFVDNRNAWFTGVFQDIELNLIEDGVFKVLWSGKDTSYEVYELS SFTDFIGEVDCRIARGGGDGSCGLIFAQQRNVGFYKFEFFIDYYRLSIILAEGEPVILAEGDPRRITTVGDQNRLRVIRQ GERIRLFINDALAADLRDNTLGAGRVGVSTACYNAEGGVEVHFDNFGIWSLASGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32119; Mature: 32119
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPSFIRTGRQPTILLVVIILVIVIGGTALVTWMSRRSPVAPLVAPTASVTSLPPSPTAI CCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHH RSVDSQSPSSDTVSVTQTAQARTAQALVQMAATQTATALQAELTALFADAQRVFYDEFVD HCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NRNAWFTGVFQDIELNLIEDGVFKVLWSGKDTSYEVYELSSFTDFIGEVDCRIARGGGDG CCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCEEEEEECHHHHHHCCCEEEEEECCCCC SCGLIFAQQRNVGFYKFEFFIDYYRLSIILAEGEPVILAEGDPRRITTVGDQNRLRVIRQ CEEEEEEECCCCCEEEEEEEEEEEEEEEEEECCCEEEEECCCCCEEEECCCCCCEEEEEC GERIRLFINDALAADLRDNTLGAGRVGVSTACYNAEGGVEVHFDNFGIWSLASGS CCEEEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEECCCC >Mature Secondary Structure MVPSFIRTGRQPTILLVVIILVIVIGGTALVTWMSRRSPVAPLVAPTASVTSLPPSPTAI CCCCHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCCHHH RSVDSQSPSSDTVSVTQTAQARTAQALVQMAATQTATALQAELTALFADAQRVFYDEFVD HCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NRNAWFTGVFQDIELNLIEDGVFKVLWSGKDTSYEVYELSSFTDFIGEVDCRIARGGGDG CCCCEEEEEEEEEEEEEECCCEEEEEECCCCCCEEEEEECHHHHHHCCCEEEEEECCCCC SCGLIFAQQRNVGFYKFEFFIDYYRLSIILAEGEPVILAEGDPRRITTVGDQNRLRVIRQ CEEEEEEECCCCCEEEEEEEEEEEEEEEEEECCCEEEEECCCCCEEEECCCCCCEEEEEC GERIRLFINDALAADLRDNTLGAGRVGVSTACYNAEGGVEVHFDNFGIWSLASGS CCEEEEEEECCHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA