Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526474

Identifier: 222526474

GI number: 222526474

Start: 4040084

End: 4040563

Strand: Direct

Name: 222526474

Synonym: Chy400_3241

Alternate gene names: NA

Gene position: 4040084-4040563 (Clockwise)

Preceding gene: 222526473

Following gene: 222526475

Centisome position: 76.68

GC content: 58.75

Gene sequence:

>480_bases
ATGCAATCACCATTTCCCCATCTGCTTGAGGAGTTTGTCGTTGTCACCGCCCCGATGGAACGGGTTGAGCGAGTGATAAC
CGACGAGGCGTTGATGAAACGCTGGATGTCGCCGGCAGTTCAATTCACACCGCTCGATGGCTGGCAATTTGAGCGCGGCG
CACGCTGGCGGCTGCGCCTTACCGGGGTTGGGCCGCTGCTCGAAGCCGGTTACGTAGTCGTGGAACGTCGCCCTGGACTG
GTGCTGTGGGCATTCGACGGTTTCTGGGAGGGATTCGATGCCTGGCAGTGGCTGCCCTGGCAAGAGCGATCCGATCAAAC
GCTGATCCATAACCGGGTTGAATATCGGTTACGTGTCCCCGGGCTTGATCTGATCTGGCCGTTGACCGTTGCCCCATTGA
TGAAGCTGGACGCCCAGGCCCAAATGGTGCGCTTGCGTCAGATATGTGAGCAGCGAGAGGCTGTGCAGTTTCAGCCATAA

Upstream 100 bases:

>100_bases
GTGTCTCGACGGCCTGTTACAATGCTGAAGGTGGGGTCGAAGTCCATTTCGACAATTTCGGTATCTGGTCGCTGGCATCA
GGTTCGTGAAAGGGTAACCG

Downstream 100 bases:

>100_bases
AGTGATCGGGCGTGTATCCAGGACTTGTTACAATCGCTGGCGTGTCTGTATCGTATCGGGCGGATTACGTCGCGTTTCGG
ACAATTCCTCACGTCCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRLTGVGPLLEAGYVVVERRPGL
VLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVPGLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP

Sequences:

>Translated_159_residues
MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRLTGVGPLLEAGYVVVERRPGL
VLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVPGLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP
>Mature_159_residues
MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRLTGVGPLLEAGYVVVERRPGL
VLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVPGLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18771; Mature: 18771

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRL
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEE
TGVGPLLEAGYVVVERRPGLVLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVP
ECCCCHHHCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCEEEEEECC
GLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP
CCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRL
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEE
TGVGPLLEAGYVVVERRPGLVLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVP
ECCCCHHHCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCEEEEEECC
GLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP
CCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA