| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526474
Identifier: 222526474
GI number: 222526474
Start: 4040084
End: 4040563
Strand: Direct
Name: 222526474
Synonym: Chy400_3241
Alternate gene names: NA
Gene position: 4040084-4040563 (Clockwise)
Preceding gene: 222526473
Following gene: 222526475
Centisome position: 76.68
GC content: 58.75
Gene sequence:
>480_bases ATGCAATCACCATTTCCCCATCTGCTTGAGGAGTTTGTCGTTGTCACCGCCCCGATGGAACGGGTTGAGCGAGTGATAAC CGACGAGGCGTTGATGAAACGCTGGATGTCGCCGGCAGTTCAATTCACACCGCTCGATGGCTGGCAATTTGAGCGCGGCG CACGCTGGCGGCTGCGCCTTACCGGGGTTGGGCCGCTGCTCGAAGCCGGTTACGTAGTCGTGGAACGTCGCCCTGGACTG GTGCTGTGGGCATTCGACGGTTTCTGGGAGGGATTCGATGCCTGGCAGTGGCTGCCCTGGCAAGAGCGATCCGATCAAAC GCTGATCCATAACCGGGTTGAATATCGGTTACGTGTCCCCGGGCTTGATCTGATCTGGCCGTTGACCGTTGCCCCATTGA TGAAGCTGGACGCCCAGGCCCAAATGGTGCGCTTGCGTCAGATATGTGAGCAGCGAGAGGCTGTGCAGTTTCAGCCATAA
Upstream 100 bases:
>100_bases GTGTCTCGACGGCCTGTTACAATGCTGAAGGTGGGGTCGAAGTCCATTTCGACAATTTCGGTATCTGGTCGCTGGCATCA GGTTCGTGAAAGGGTAACCG
Downstream 100 bases:
>100_bases AGTGATCGGGCGTGTATCCAGGACTTGTTACAATCGCTGGCGTGTCTGTATCGTATCGGGCGGATTACGTCGCGTTTCGG ACAATTCCTCACGTCCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRLTGVGPLLEAGYVVVERRPGL VLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVPGLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP
Sequences:
>Translated_159_residues MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRLTGVGPLLEAGYVVVERRPGL VLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVPGLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP >Mature_159_residues MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRLTGVGPLLEAGYVVVERRPGL VLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVPGLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18771; Mature: 18771
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRL CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEE TGVGPLLEAGYVVVERRPGLVLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVP ECCCCHHHCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCEEEEEECC GLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP CCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQSPFPHLLEEFVVVTAPMERVERVITDEALMKRWMSPAVQFTPLDGWQFERGARWRLRL CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEE TGVGPLLEAGYVVVERRPGLVLWAFDGFWEGFDAWQWLPWQERSDQTLIHNRVEYRLRVP ECCCCHHHCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHCEEEEEECC GLDLIWPLTVAPLMKLDAQAQMVRLRQICEQREAVQFQP CCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA