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The map label for this gene is 222526430

Identifier: 222526430

GI number: 222526430

Start: 3957243

End: 3957500

Strand: Direct

Name: 222526430

Synonym: Chy400_3197

Alternate gene names: NA

Gene position: 3957243-3957500 (Clockwise)

Preceding gene: 222526429

Following gene: 222526431

Centisome position: 75.1

GC content: 52.33

Gene sequence:

>258_bases
ATGCAATGTCTTGTCATCTACGACATTCCCAATGATCGGGCAAGACAGCGAGTCGCTGATGCCTGCCTCGACTATGGCCT
GCAACGAATTCAATATAGTGCTTTCGCCGGGAATCTCAGCCGGACCCATCAACGGGCACTATTCGGCGAAATAACCCGGC
GGGTCAAAGGTCATACCGCAAACGTCCAACTTTTCGTCTTCGACAGCAAAACCTGGAGTGATCGGCGCATACTGGAGCAG
CAATATGACGATGCCTGA

Upstream 100 bases:

>100_bases
GTCATATTCTCCAGTGTCAGGCGCGACACATTGCGACGTATGTGCGGGGAGAGCGTGAATCTTACACCCCATTCATCATG
GGATGGTAAGGAGGGCCGCG

Downstream 100 bases:

>100_bases
TCTTGATACGATTGAAGTCAGCGATATCAAACAGTGGCGTTACTGTCCGCGGGTTGTGTGGTACACCTACTGCCTGCCTG
CCATTCGTCCAAAGACAGAT

Product: CRISPR-associated protein Cas2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MQCLVIYDIPNDRARQRVADACLDYGLQRIQYSAFAGNLSRTHQRALFGEITRRVKGHTANVQLFVFDSKTWSDRRILEQ
QYDDA

Sequences:

>Translated_85_residues
MQCLVIYDIPNDRARQRVADACLDYGLQRIQYSAFAGNLSRTHQRALFGEITRRVKGHTANVQLFVFDSKTWSDRRILEQ
QYDDA
>Mature_85_residues
MQCLVIYDIPNDRARQRVADACLDYGLQRIQYSAFAGNLSRTHQRALFGEITRRVKGHTANVQLFVFDSKTWSDRRILEQ
QYDDA

Specific function: Unknown

COG id: COG1343

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9922; Mature: 9922

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQCLVIYDIPNDRARQRVADACLDYGLQRIQYSAFAGNLSRTHQRALFGEITRRVKGHTA
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
NVQLFVFDSKTWSDRRILEQQYDDA
CEEEEEECCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MQCLVIYDIPNDRARQRVADACLDYGLQRIQYSAFAGNLSRTHQRALFGEITRRVKGHTA
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
NVQLFVFDSKTWSDRRILEQQYDDA
CEEEEEECCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA