Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222526431

Identifier: 222526431

GI number: 222526431

Start: 3957487

End: 3958095

Strand: Direct

Name: 222526431

Synonym: Chy400_3198

Alternate gene names: NA

Gene position: 3957487-3958095 (Clockwise)

Preceding gene: 222526430

Following gene: 222526432

Centisome position: 75.11

GC content: 53.53

Gene sequence:

>609_bases
ATGACGATGCCTGATCTTGATACGATTGAAGTCAGCGATATCAAACAGTGGCGTTACTGTCCGCGGGTTGTGTGGTACAC
CTACTGCCTGCCTGCCATTCGTCCAAAGACAGATTTAATGCGTCAGGGAGCTGCGAGTCACCGTGCTGAGGAAGACCGGG
AAGAGCGGCGTTCACTTCGCACATATGGCCTGAAAACCGGAGAGCGTTTCTTCCACGTCTATCTACGGTCAGAGCGACTT
GGCGTCAGAGGAATCCTCGACCTGGCAATTGCAGTACCCAACCGGTCAGACCCGGCAGCAAAAATAGTCGTGGTTGACTA
CAAAGATAGCGAGCAGGATGCCGGGCCGCACTTCAAACTTCAGGTAGGCGCCTACGCACTTCTCATAGAAGAGACGTGGG
GTTTACCGGTAGAAACCGGATGGATATACCACATTCCATTACGGAAAGCGGAAAAAGTCCCAATCAGCCCCCAATTACGC
AAAAACGTAATCGAAACGATTGCTGCGGTGCAAAAAGCCATTCGGACTGAAGCGCTACCACCGCCACCGTCGAGCCGGGC
ACTCTGCGTCAACTGCGAGTTTCGCCGCTTCTGCAACGACGTCGTATAG

Upstream 100 bases:

>100_bases
GGCGAAATAACCCGGCGGGTCAAAGGTCATACCGCAAACGTCCAACTTTTCGTCTTCGACAGCAAAACCTGGAGTGATCG
GCGCATACTGGAGCAGCAAT

Downstream 100 bases:

>100_bases
ATCGACCCTGAGAATAGTCATATACGTAGTCGATTCGCAACTGAGTACCGAAAGCCGTCATCAACAGCGTATTGGTACTC
AGTTGCTCTACGTCCAATGA

Product: CRISPR-associated protein Cas4

Products: NA

Alternate protein names: RecB Family Exonuclease Protein

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTMPDLDTIEVSDIKQWRYCPRVVWYTYCLPAIRPKTDLMRQGAASHRAEEDREERRSLRTYGLKTGERFFHVYLRSERL
GVRGILDLAIAVPNRSDPAAKIVVVDYKDSEQDAGPHFKLQVGAYALLIEETWGLPVETGWIYHIPLRKAEKVPISPQLR
KNVIETIAAVQKAIRTEALPPPPSSRALCVNCEFRRFCNDVV

Sequences:

>Translated_202_residues
MTMPDLDTIEVSDIKQWRYCPRVVWYTYCLPAIRPKTDLMRQGAASHRAEEDREERRSLRTYGLKTGERFFHVYLRSERL
GVRGILDLAIAVPNRSDPAAKIVVVDYKDSEQDAGPHFKLQVGAYALLIEETWGLPVETGWIYHIPLRKAEKVPISPQLR
KNVIETIAAVQKAIRTEALPPPPSSRALCVNCEFRRFCNDVV
>Mature_201_residues
TMPDLDTIEVSDIKQWRYCPRVVWYTYCLPAIRPKTDLMRQGAASHRAEEDREERRSLRTYGLKTGERFFHVYLRSERLG
VRGILDLAIAVPNRSDPAAKIVVVDYKDSEQDAGPHFKLQVGAYALLIEETWGLPVETGWIYHIPLRKAEKVPISPQLRK
NVIETIAAVQKAIRTEALPPPPSSRALCVNCEFRRFCNDVV

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23149; Mature: 23018

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMPDLDTIEVSDIKQWRYCPRVVWYTYCLPAIRPKTDLMRQGAASHRAEEDREERRSLR
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCHHHHHHHHHHHH
TYGLKTGERFFHVYLRSERLGVRGILDLAIAVPNRSDPAAKIVVVDYKDSEQDAGPHFKL
HHCCCCCCCEEEEEEECCCCCHHHEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEE
QVGAYALLIEETWGLPVETGWIYHIPLRKAEKVPISPQLRKNVIETIAAVQKAIRTEALP
EECEEEEEEECCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PPPSSRALCVNCEFRRFCNDVV
CCCCCCEEEECCHHHHHHHHCC
>Mature Secondary Structure 
TMPDLDTIEVSDIKQWRYCPRVVWYTYCLPAIRPKTDLMRQGAASHRAEEDREERRSLR
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHCCHHHHHHHHHHHH
TYGLKTGERFFHVYLRSERLGVRGILDLAIAVPNRSDPAAKIVVVDYKDSEQDAGPHFKL
HHCCCCCCCEEEEEEECCCCCHHHEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEEE
QVGAYALLIEETWGLPVETGWIYHIPLRKAEKVPISPQLRKNVIETIAAVQKAIRTEALP
EECEEEEEEECCCCCEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PPPSSRALCVNCEFRRFCNDVV
CCCCCCEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA