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The map label for this gene is 222526426

Identifier: 222526426

GI number: 222526426

Start: 3951820

End: 3952557

Strand: Direct

Name: 222526426

Synonym: Chy400_3193

Alternate gene names: NA

Gene position: 3951820-3952557 (Clockwise)

Preceding gene: 222526425

Following gene: 222526427

Centisome position: 75.0

GC content: 56.23

Gene sequence:

>738_bases
ATGCAGGCGCTCAAGATTGTGCTCGAAGCTCTGACAACTTCATTTCGCTATCCTCACTTTATGTTGGGGGTACAGCCGAG
CTTTCCATTGCCGCCGCCGGCAACCATTTATGGGCACATCTGTAGCGCGTTGGGCGACTGGGTTGATCCAGCAGGACTGG
CGTTTGCCTACCATTTCACCGCTGCCGGTGAAGGGCACGACCTTGAGCATATTCATGTGCTCTCGGCGTCATCGGGAAAG
TTGCCCGGCGGCGAACCCAAGGTGCTTGAAGGGAACATCAATCCCTTCAAGCGCCAGCTCCTGCTCTTTCCGCGGTTGAC
CCTCTACCTCAACCGACCGGAGTGGATTGATGCCTTTCGTTTTCCGCGCTACCCGGTGGTTCTGGGTCGTTCACAAGACC
TGGCAGCCTATACCCACATCGACATTGTCGATCTCCAGCAGGCCGATCAGGTCTATTTCGAGCATACCCTGTTGCCCTTT
GCCATGGCTACCCAGGCCCCGGCGGGTGTTGTCACGCTGATGCCGCGCTGGATTAACTATCGTCAGCGTCGGCAGCCCAG
CTTCGCCCGCTATCTGGTCTTGACCGAACGGATTACAACCAGGCAGATGCTGCGTTTTGGTCAGCAATCGGCAACATACT
GGAGTGATCCAACAGCACCGGTTGTTGATGGATTGCCACTCGGTTTGTGGTTTCATACCTTTGTGGGAGCAGACGATGAA
GCCTTTGCCATGGCCTGA

Upstream 100 bases:

>100_bases
AAGGTTTGCCACACATCATCCTGAGTCATCCGCGCGAAGCCTTTGCCGCCTTCATTCAGGACTGTGATACACATCCTGAA
TGGCTGGATTAGGGGGGATT

Downstream 100 bases:

>100_bases
TTGGCAGGAAGATCTGTTGGCCAAGAGTCAGCAGTACGGCGGAGAGACATTAGCCAGTCATACGTGGGATGTTCTCTGCC
GACTGGCCGATCTCTATCGG

Product: CRISPR-associated protein Cas5 family

Products: NA

Alternate protein names: CRISPR-Associated Family; CRISPR-Associated Tneap Subtype; DNA Repair Protein

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MQALKIVLEALTTSFRYPHFMLGVQPSFPLPPPATIYGHICSALGDWVDPAGLAFAYHFTAAGEGHDLEHIHVLSASSGK
LPGGEPKVLEGNINPFKRQLLLFPRLTLYLNRPEWIDAFRFPRYPVVLGRSQDLAAYTHIDIVDLQQADQVYFEHTLLPF
AMATQAPAGVVTLMPRWINYRQRRQPSFARYLVLTERITTRQMLRFGQQSATYWSDPTAPVVDGLPLGLWFHTFVGADDE
AFAMA

Sequences:

>Translated_245_residues
MQALKIVLEALTTSFRYPHFMLGVQPSFPLPPPATIYGHICSALGDWVDPAGLAFAYHFTAAGEGHDLEHIHVLSASSGK
LPGGEPKVLEGNINPFKRQLLLFPRLTLYLNRPEWIDAFRFPRYPVVLGRSQDLAAYTHIDIVDLQQADQVYFEHTLLPF
AMATQAPAGVVTLMPRWINYRQRRQPSFARYLVLTERITTRQMLRFGQQSATYWSDPTAPVVDGLPLGLWFHTFVGADDE
AFAMA
>Mature_245_residues
MQALKIVLEALTTSFRYPHFMLGVQPSFPLPPPATIYGHICSALGDWVDPAGLAFAYHFTAAGEGHDLEHIHVLSASSGK
LPGGEPKVLEGNINPFKRQLLLFPRLTLYLNRPEWIDAFRFPRYPVVLGRSQDLAAYTHIDIVDLQQADQVYFEHTLLPF
AMATQAPAGVVTLMPRWINYRQRRQPSFARYLVLTERITTRQMLRFGQQSATYWSDPTAPVVDGLPLGLWFHTFVGADDE
AFAMA

Specific function: Unknown

COG id: COG1688

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27598; Mature: 27598

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALKIVLEALTTSFRYPHFMLGVQPSFPLPPPATIYGHICSALGDWVDPAGLAFAYHFT
CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEE
AAGEGHDLEHIHVLSASSGKLPGGEPKVLEGNINPFKRQLLLFPRLTLYLNRPEWIDAFR
ECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCEEEEEECCCCHHHHHC
FPRYPVVLGRSQDLAAYTHIDIVDLQQADQVYFEHTLLPFAMATQAPAGVVTLMPRWINY
CCCCCEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHH
RQRRQPSFARYLVLTERITTRQMLRFGQQSATYWSDPTAPVVDGLPLGLWFHTFVGADDE
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCC
AFAMA
CEECC
>Mature Secondary Structure
MQALKIVLEALTTSFRYPHFMLGVQPSFPLPPPATIYGHICSALGDWVDPAGLAFAYHFT
CHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEE
AAGEGHDLEHIHVLSASSGKLPGGEPKVLEGNINPFKRQLLLFPRLTLYLNRPEWIDAFR
ECCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHHHHHHHCEEEEEECCCCHHHHHC
FPRYPVVLGRSQDLAAYTHIDIVDLQQADQVYFEHTLLPFAMATQAPAGVVTLMPRWINY
CCCCCEEEECCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHH
RQRRQPSFARYLVLTERITTRQMLRFGQQSATYWSDPTAPVVDGLPLGLWFHTFVGADDE
HHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCC
AFAMA
CEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA