| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526425
Identifier: 222526425
GI number: 222526425
Start: 3950720
End: 3951811
Strand: Direct
Name: 222526425
Synonym: Chy400_3192
Alternate gene names: NA
Gene position: 3950720-3951811 (Clockwise)
Preceding gene: 222526424
Following gene: 222526426
Centisome position: 74.98
GC content: 55.13
Gene sequence:
>1092_bases ATGGCCTTCGTAACCGGTTTATTCTTGATTGATGCGCCGGCGTCGGCACTCAACAATCTCGGTTCGATTCCAGGTGAGCG TGAAGAGAACACGGTCGGCGTCAAAGTCATTACCACCAAAGCCGGCAATTTTCCCTATGTGTCGGCGCAGGCGTTTCGCT ACTGGCTACGCACAACGCTCGAACGGCGGGTACCGGAGTGGCGTTCATCGCCGATCTTCCGTGAAGAGAAGATTGCCTAC ACCGACGCCAACCCGATTCGTTACTGGGACGATGATCTGTTCGGGTATATGCGGGCACCGGGCAAAGGTGAGACGGCGAA AAAGAGTCGGGAGCAGATGAGTTTGCTGGAAGAATCTACGCCGGTGACAGATACAGTTACCCGCGCTTCACCGTTCCGGG TGAGTACACTGGTCTCGATTGCACCGGTCAATCCGACCAGTGATTTTGGTGTGATGTCGCGGCACGAAGGAAATCCGGTG CCTCATGAGCATCAATTCTATCGTACCACGCTGAAAGGTCTCTTCTCGCTTGACCTGTGGGCATGTGGTACCTTCTCGTA CCGCAATCGTACTGGTTTTCGCAACCTCGACGATGAGCGGGTGCGTTTGGTGAAGGATGTGGCCGGTGTCGAGCATCTCG AAAGCGAGAAGTCGTACCGCTTGCCGAAGCAAGAGCGCCTGGCCCGCGTAAAAGCCCTCTTTGCCGGGATGGCGCAATTG GAGGGTGGTGCGAAACAAGCCCTACACTACACCGATGTCAGCCCGGCGCTGGTGATCTTTGCCGTTACCACGGGTGGTAA TCATGTCTTCCACCATACCGTCGGTGCGCAGCGTAATGGTTTACCAGAGATCAAGATTGACGCTTTACAGGAAGCCCTGC GTGTCTTCGCCGATGGCATCCGTTCGCCGATCTATGTGGGGTGGGTGAAGGGGTATCTCGATGAGGCACGGGCAGCTTTT GAGCAATTTGTTACTCAGCATAATGAAGAAGCTGCGGCGAAAGGTTTGCCACACATCATCCTGAGTCATCCGCGCGAAGC CTTTGCCGCCTTCATTCAGGACTGTGATACACATCCTGAATGGCTGGATTAG
Upstream 100 bases:
>100_bases AACAGTTGCGAGACTGGATTGCCGGTAATCCTGATGCTGTTCCAGATGATGCGGAAGTTGCTGTTAGCGAATAATTAATG GAGAAAGGAGAGGAACAACC
Downstream 100 bases:
>100_bases GGGGGATTATGCAGGCGCTCAAGATTGTGCTCGAAGCTCTGACAACTTCATTTCGCTATCCTCACTTTATGTTGGGGGTA CAGCCGAGCTTTCCATTGCC
Product: CRISPR-associated autoregulator, DevR family
Products: NA
Alternate protein names: CRISPR-Associated Autoregulator DevR Family Protein Protein; CRISPR-Associated Regulatory Protein DevR Family; DNA Repair Protein
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MAFVTGLFLIDAPASALNNLGSIPGEREENTVGVKVITTKAGNFPYVSAQAFRYWLRTTLERRVPEWRSSPIFREEKIAY TDANPIRYWDDDLFGYMRAPGKGETAKKSREQMSLLEESTPVTDTVTRASPFRVSTLVSIAPVNPTSDFGVMSRHEGNPV PHEHQFYRTTLKGLFSLDLWACGTFSYRNRTGFRNLDDERVRLVKDVAGVEHLESEKSYRLPKQERLARVKALFAGMAQL EGGAKQALHYTDVSPALVIFAVTTGGNHVFHHTVGAQRNGLPEIKIDALQEALRVFADGIRSPIYVGWVKGYLDEARAAF EQFVTQHNEEAAAKGLPHIILSHPREAFAAFIQDCDTHPEWLD
Sequences:
>Translated_363_residues MAFVTGLFLIDAPASALNNLGSIPGEREENTVGVKVITTKAGNFPYVSAQAFRYWLRTTLERRVPEWRSSPIFREEKIAY TDANPIRYWDDDLFGYMRAPGKGETAKKSREQMSLLEESTPVTDTVTRASPFRVSTLVSIAPVNPTSDFGVMSRHEGNPV PHEHQFYRTTLKGLFSLDLWACGTFSYRNRTGFRNLDDERVRLVKDVAGVEHLESEKSYRLPKQERLARVKALFAGMAQL EGGAKQALHYTDVSPALVIFAVTTGGNHVFHHTVGAQRNGLPEIKIDALQEALRVFADGIRSPIYVGWVKGYLDEARAAF EQFVTQHNEEAAAKGLPHIILSHPREAFAAFIQDCDTHPEWLD >Mature_362_residues AFVTGLFLIDAPASALNNLGSIPGEREENTVGVKVITTKAGNFPYVSAQAFRYWLRTTLERRVPEWRSSPIFREEKIAYT DANPIRYWDDDLFGYMRAPGKGETAKKSREQMSLLEESTPVTDTVTRASPFRVSTLVSIAPVNPTSDFGVMSRHEGNPVP HEHQFYRTTLKGLFSLDLWACGTFSYRNRTGFRNLDDERVRLVKDVAGVEHLESEKSYRLPKQERLARVKALFAGMAQLE GGAKQALHYTDVSPALVIFAVTTGGNHVFHHTVGAQRNGLPEIKIDALQEALRVFADGIRSPIYVGWVKGYLDEARAAFE QFVTQHNEEAAAKGLPHIILSHPREAFAAFIQDCDTHPEWLD
Specific function: Unknown
COG id: COG1857
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40722; Mature: 40591
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFVTGLFLIDAPASALNNLGSIPGEREENTVGVKVITTKAGNFPYVSAQAFRYWLRTTL CCCEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHH ERRVPEWRSSPIFREEKIAYTDANPIRYWDDDLFGYMRAPGKGETAKKSREQMSLLEEST HHHCCHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCC PVTDTVTRASPFRVSTLVSIAPVNPTSDFGVMSRHEGNPVPHEHQFYRTTLKGLFSLDLW CCCHHHHCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ACGTFSYRNRTGFRNLDDERVRLVKDVAGVEHLESEKSYRLPKQERLARVKALFAGMAQL HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHH EGGAKQALHYTDVSPALVIFAVTTGGNHVFHHTVGAQRNGLPEIKIDALQEALRVFADGI CCCHHHHEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH RSPIYVGWVKGYLDEARAAFEQFVTQHNEEAAAKGLPHIILSHPREAFAAFIQDCDTHPE CCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCC WLD CCC >Mature Secondary Structure AFVTGLFLIDAPASALNNLGSIPGEREENTVGVKVITTKAGNFPYVSAQAFRYWLRTTL CCEEEEEEECCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCEEHHHHHHHHHHHHH ERRVPEWRSSPIFREEKIAYTDANPIRYWDDDLFGYMRAPGKGETAKKSREQMSLLEEST HHHCCHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCC PVTDTVTRASPFRVSTLVSIAPVNPTSDFGVMSRHEGNPVPHEHQFYRTTLKGLFSLDLW CCCHHHHCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ACGTFSYRNRTGFRNLDDERVRLVKDVAGVEHLESEKSYRLPKQERLARVKALFAGMAQL HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHH EGGAKQALHYTDVSPALVIFAVTTGGNHVFHHTVGAQRNGLPEIKIDALQEALRVFADGI CCCHHHHEEECCCCCEEEEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH RSPIYVGWVKGYLDEARAAFEQFVTQHNEEAAAKGLPHIILSHPREAFAAFIQDCDTHPE CCCEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHCCCHHHHHHHHHHCCCCCC WLD CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA