| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526424
Identifier: 222526424
GI number: 222526424
Start: 3949191
End: 3950693
Strand: Direct
Name: 222526424
Synonym: Chy400_3191
Alternate gene names: NA
Gene position: 3949191-3950693 (Clockwise)
Preceding gene: 222526423
Following gene: 222526425
Centisome position: 74.95
GC content: 54.36
Gene sequence:
>1503_bases ATGAATCAGATACGCTACACCGGCCATCCATTCGTTGATGTCGGTTTTGCCACAATGACGGCGTTTGTCGGGAAGCAACG TGTTGCCGATCTCAATGCCGGTGATTTTCAACGTATTGCCGATTACATTGAGGCAAATTATGTGCGGCAGCCGTTGCAGA GGTTTCTGACAGTAGCGCTTACCACGAATGCATGGTTTGTCCAGCCGGCGTTTAACCCAGACCGTCCCGGCTTGTCGCCT GACCAACAGGCTAATGCACGTCAAAAACGTGATTACTGGGCCAAACGGCATCTGCGGCAGTGGGCAGAGGCAGCCAGAGC GCTTGAAACCTGCCTCTTCACCGGTTTGCCGGCGGCAGCATTTGAGTTGTCGGGCAAACTGCAACCCGGACGGGTCGGGC GGGCGCAGATGCCGTTGTTGCAAGGCGACGATTCGATCAATTTCTTTGTTAACGGCGACCCCGGTCTGCCGATGGCACCG GAGGCGATTCTGGCTTTGCAGGCGATGCCGTTGGGTTGTGCCAGGGTAGGCAATAATCTGCTCGCTGTGCATTGTGATGA TGAGCGGTTGACGATTGCGTTTGCCAATCGGTTTTTGCAGCGTAACCTGAGCGACGTGGCAAAAGCGCAGGCTGCCGGTG AAGAGAAACTACCCGGTTCCCCGCGTAGTTTGCGGACATTGCTGATTGAGACGCTGGCCGATATTATGCGCCAGCAACTC GAAGGGGCGCAACGGACGACGATCACGGCTTACCATTTCTCTAACTTCGGTCAATCACCATTCCTGGAGCTGTATCATCT ACCGCTCCAGATTACCGGTTTTCTGCTTGCGGTGTATACGCCGACCTATCGCAACCTCTGGAATGAGCTGGTTGCCCGAA GCTGGCAGCGCGTGACGCCGACCGGGAAGCGTGGGAAGGCTGCCGAACCGGCTGAACCGCGGGTGAACTATCTGTACGAA GACTTGTTCACACTCCCGGCACAGGCAGCGCAGTTTGTGCGTACCTATTTTCTCCGCATCCCTGATGTGAATCGATCTAC CAATCGATCTACTGATGACCCCCGTCGCGACTATTCACTCCGTCGGGATATTGACCTTGTTTCATGGCCGCTGGTTGAAC TCTTTGTGCAGGAGGTAATGCTTATGACCGATGATCGAGTGGCGATTGTGAAGGAATTGGGCGATAAACTCGCCGACTAC ACCCGCAAACAAGGCGGGAAGCGCTTTTTCCGTCAGTTCTTCACCGTGCAGCGGAGTGACCATTTTCTGAGCCTGCTCAA CAGGACGAATATCGACTACACGCGCTATACGCAGGGGCGCGAAACGCTCTTCACTCTTGATAGTTTTCTAACCGTCTTTA TGGAAGGTGAGGAGGTGTTGCGCAGCGATTGGCGTTTGATGCGCGATCTAGTGTTGATCCGTATGGTTGAACAGTTGCGA GACTGGATTGCCGGTAATCCTGATGCTGTTCCAGATGATGCGGAAGTTGCTGTTAGCGAATAA
Upstream 100 bases:
>100_bases TGCGAAAAGCCGCAGCACTGTACACGTAACTGCAACTATAGTGCAGGCTGGGATGATAGACTGCGTTTTGGTAGTAGATG TTTGAATAACGAGGGCAAGC
Downstream 100 bases:
>100_bases TTAATGGAGAAAGGAGAGGAACAACCATGGCCTTCGTAACCGGTTTATTCTTGATTGATGCGCCGGCGTCGGCACTCAAC AATCTCGGTTCGATTCCAGG
Product: CRISPR-associated CXXC_CXXC protein Cst1
Products: NA
Alternate protein names: CRISPR-Associated CXXC_CXXC; CRISPR-Associated Protein
Number of amino acids: Translated: 500; Mature: 500
Protein sequence:
>500_residues MNQIRYTGHPFVDVGFATMTAFVGKQRVADLNAGDFQRIADYIEANYVRQPLQRFLTVALTTNAWFVQPAFNPDRPGLSP DQQANARQKRDYWAKRHLRQWAEAARALETCLFTGLPAAAFELSGKLQPGRVGRAQMPLLQGDDSINFFVNGDPGLPMAP EAILALQAMPLGCARVGNNLLAVHCDDERLTIAFANRFLQRNLSDVAKAQAAGEEKLPGSPRSLRTLLIETLADIMRQQL EGAQRTTITAYHFSNFGQSPFLELYHLPLQITGFLLAVYTPTYRNLWNELVARSWQRVTPTGKRGKAAEPAEPRVNYLYE DLFTLPAQAAQFVRTYFLRIPDVNRSTNRSTDDPRRDYSLRRDIDLVSWPLVELFVQEVMLMTDDRVAIVKELGDKLADY TRKQGGKRFFRQFFTVQRSDHFLSLLNRTNIDYTRYTQGRETLFTLDSFLTVFMEGEEVLRSDWRLMRDLVLIRMVEQLR DWIAGNPDAVPDDAEVAVSE
Sequences:
>Translated_500_residues MNQIRYTGHPFVDVGFATMTAFVGKQRVADLNAGDFQRIADYIEANYVRQPLQRFLTVALTTNAWFVQPAFNPDRPGLSP DQQANARQKRDYWAKRHLRQWAEAARALETCLFTGLPAAAFELSGKLQPGRVGRAQMPLLQGDDSINFFVNGDPGLPMAP EAILALQAMPLGCARVGNNLLAVHCDDERLTIAFANRFLQRNLSDVAKAQAAGEEKLPGSPRSLRTLLIETLADIMRQQL EGAQRTTITAYHFSNFGQSPFLELYHLPLQITGFLLAVYTPTYRNLWNELVARSWQRVTPTGKRGKAAEPAEPRVNYLYE DLFTLPAQAAQFVRTYFLRIPDVNRSTNRSTDDPRRDYSLRRDIDLVSWPLVELFVQEVMLMTDDRVAIVKELGDKLADY TRKQGGKRFFRQFFTVQRSDHFLSLLNRTNIDYTRYTQGRETLFTLDSFLTVFMEGEEVLRSDWRLMRDLVLIRMVEQLR DWIAGNPDAVPDDAEVAVSE >Mature_500_residues MNQIRYTGHPFVDVGFATMTAFVGKQRVADLNAGDFQRIADYIEANYVRQPLQRFLTVALTTNAWFVQPAFNPDRPGLSP DQQANARQKRDYWAKRHLRQWAEAARALETCLFTGLPAAAFELSGKLQPGRVGRAQMPLLQGDDSINFFVNGDPGLPMAP EAILALQAMPLGCARVGNNLLAVHCDDERLTIAFANRFLQRNLSDVAKAQAAGEEKLPGSPRSLRTLLIETLADIMRQQL EGAQRTTITAYHFSNFGQSPFLELYHLPLQITGFLLAVYTPTYRNLWNELVARSWQRVTPTGKRGKAAEPAEPRVNYLYE DLFTLPAQAAQFVRTYFLRIPDVNRSTNRSTDDPRRDYSLRRDIDLVSWPLVELFVQEVMLMTDDRVAIVKELGDKLADY TRKQGGKRFFRQFFTVQRSDHFLSLLNRTNIDYTRYTQGRETLFTLDSFLTVFMEGEEVLRSDWRLMRDLVLIRMVEQLR DWIAGNPDAVPDDAEVAVSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57054; Mature: 57054
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIRYTGHPFVDVGFATMTAFVGKQRVADLNAGDFQRIADYIEANYVRQPLQRFLTVAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE TTNAWFVQPAFNPDRPGLSPDQQANARQKRDYWAKRHLRQWAEAARALETCLFTGLPAAA ECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FELSGKLQPGRVGRAQMPLLQGDDSINFFVNGDPGLPMAPEAILALQAMPLGCARVGNNL HHHCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHCCCE LAVHCDDERLTIAFANRFLQRNLSDVAKAQAAGEEKLPGSPRSLRTLLIETLADIMRQQL EEEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EGAQRTTITAYHFSNFGQSPFLELYHLPLQITGFLLAVYTPTYRNLWNELVARSWQRVTP CCCCCCEEEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC TGKRGKAAEPAEPRVNYLYEDLFTLPAQAAQFVRTYFLRIPDVNRSTNRSTDDPRRDYSL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHH RRDIDLVSWPLVELFVQEVMLMTDDRVAIVKELGDKLADYTRKQGGKRFFRQFFTVQRSD HHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH HFLSLLNRTNIDYTRYTQGRETLFTLDSFLTVFMEGEEVLRSDWRLMRDLVLIRMVEQLR HHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DWIAGNPDAVPDDAEVAVSE HHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNQIRYTGHPFVDVGFATMTAFVGKQRVADLNAGDFQRIADYIEANYVRQPLQRFLTVAL CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE TTNAWFVQPAFNPDRPGLSPDQQANARQKRDYWAKRHLRQWAEAARALETCLFTGLPAAA ECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH FELSGKLQPGRVGRAQMPLLQGDDSINFFVNGDPGLPMAPEAILALQAMPLGCARVGNNL HHHCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHCCCE LAVHCDDERLTIAFANRFLQRNLSDVAKAQAAGEEKLPGSPRSLRTLLIETLADIMRQQL EEEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH EGAQRTTITAYHFSNFGQSPFLELYHLPLQITGFLLAVYTPTYRNLWNELVARSWQRVTP CCCCCCEEEEEECCCCCCCCCHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC TGKRGKAAEPAEPRVNYLYEDLFTLPAQAAQFVRTYFLRIPDVNRSTNRSTDDPRRDYSL CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCHH RRDIDLVSWPLVELFVQEVMLMTDDRVAIVKELGDKLADYTRKQGGKRFFRQFFTVQRSD HHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH HFLSLLNRTNIDYTRYTQGRETLFTLDSFLTVFMEGEEVLRSDWRLMRDLVLIRMVEQLR HHHHHHHHCCCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DWIAGNPDAVPDDAEVAVSE HHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA