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The map label for this gene is nqo9 [H]

Identifier: 222526376

GI number: 222526376

Start: 3887361

End: 3887858

Strand: Direct

Name: nqo9 [H]

Synonym: Chy400_3142

Alternate gene names: 222526376

Gene position: 3887361-3887858 (Clockwise)

Preceding gene: 222526375

Following gene: 222526377

Centisome position: 73.78

GC content: 55.62

Gene sequence:

>498_bases
ATGATCAAAGAACTGGTCAAAGGTTTAGGAACGACGCTGCGCTACATGTTCAAGCGGCCGGTGACGGTACAATACCCGGA
AGTAAAACGCCCGGTACGCGAGCGCTTTCGCGGCCGTCACGAACTGAAGCGCTTCGCCAACGGTCAGGAGCGTTGTATTG
GATGTGCGCTCTGCGCCGCAGCTTGCCCGGCTGACGCAATTCTGGTGATACCGGCGGAAAACGATCCGCAGAATCCGCGT
TCACCCGGTGAGCGATATGCGGCCGTCTACGAGATCAATATGTTGCGCTGTATCTTCTGTGGCTACTGCGAGGATGCCTG
CCCGACCAATGCCATTGTGTTGGAGCATCAATACGAGTTGAGCTTCTACGACCGTCGGGCTGCCATCTATACAAAAGAGA
TGCTGCTGGTGCCACCAGATAAGGGACACGGCGATCCACCACCGATTCTGGCTCAACTCAATCGCCAGCCAAGTCCACCG
GCAAAGATTGATCTGTAA

Upstream 100 bases:

>100_bases
TTCCCGGTATCATCCTTGTGGCGATAAGGGTACGTTGCTTGCATTGACGCGAAACCGTTACGGCAGTCGAACAGGTTTGC
CTGCTGAAAGGGAATGGCTC

Downstream 100 bases:

>100_bases
ATGCTGGTCGATACGGTTCTGATACTGTTCGACGCCTACGGGCAAGCGGAGCGTAGCGTATGGAATTGATCCTGTTTTTG
ATAACCGCGCTGATCGCCAT

Product: NADH-quinone oxidoreductase subunit I

Products: NA

Alternate protein names: NADH dehydrogenase I subunit 9; NDH-1 subunit 9 [H]

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MIKELVKGLGTTLRYMFKRPVTVQYPEVKRPVRERFRGRHELKRFANGQERCIGCALCAAACPADAILVIPAENDPQNPR
SPGERYAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELSFYDRRAAIYTKEMLLVPPDKGHGDPPPILAQLNRQPSPP
AKIDL

Sequences:

>Translated_165_residues
MIKELVKGLGTTLRYMFKRPVTVQYPEVKRPVRERFRGRHELKRFANGQERCIGCALCAAACPADAILVIPAENDPQNPR
SPGERYAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELSFYDRRAAIYTKEMLLVPPDKGHGDPPPILAQLNRQPSPP
AKIDL
>Mature_165_residues
MIKELVKGLGTTLRYMFKRPVTVQYPEVKRPVRERFRGRHELKRFANGQERCIGCALCAAACPADAILVIPAENDPQNPR
SPGERYAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYELSFYDRRAAIYTKEMLLVPPDKGHGDPPPILAQLNRQPSPP
AKIDL

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is menaquinone. Couples the redox reaction to proton translocation (for every

COG id: COG1143

COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Homo sapiens, GI4505371, Length=145, Percent_Identity=45.5172413793103, Blast_Score=132, Evalue=1e-31,
Organism=Escherichia coli, GI1788617, Length=143, Percent_Identity=41.2587412587413, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1789075, Length=104, Percent_Identity=37.5, Blast_Score=68, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17555194, Length=141, Percent_Identity=43.2624113475177, Blast_Score=121, Evalue=1e-28,
Organism=Drosophila melanogaster, GI17864306, Length=145, Percent_Identity=42.0689655172414, Blast_Score=126, Evalue=7e-30,

Paralogues:

None

Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012285
- InterPro:   IPR010226 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 18674; Mature: 18674

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKELVKGLGTTLRYMFKRPVTVQYPEVKRPVRERFRGRHELKRFANGQERCIGCALCAA
CHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHH
ACPADAILVIPAENDPQNPRSPGERYAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYEL
HCCCCEEEEEECCCCCCCCCCCHHHEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
SFYDRRAAIYTKEMLLVPPDKGHGDPPPILAQLNRQPSPPAKIDL
HHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIKELVKGLGTTLRYMFKRPVTVQYPEVKRPVRERFRGRHELKRFANGQERCIGCALCAA
CHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHH
ACPADAILVIPAENDPQNPRSPGERYAAVYEINMLRCIFCGYCEDACPTNAIVLEHQYEL
HCCCCEEEEEECCCCCCCCCCCHHHEEEHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECC
SFYDRRAAIYTKEMLLVPPDKGHGDPPPILAQLNRQPSPPAKIDL
HHHHHHHHEEEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9020134 [H]