Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is mprA [H]
Identifier: 222525947
GI number: 222525947
Start: 3335099
End: 3335776
Strand: Direct
Name: mprA [H]
Synonym: Chy400_2703
Alternate gene names: 222525947
Gene position: 3335099-3335776 (Clockwise)
Preceding gene: 222525946
Following gene: 222525951
Centisome position: 63.3
GC content: 56.64
Gene sequence:
>678_bases ATGACACGTATCTTGGTGATTGAAGACGAAACTGAAATAGCCTCGTTTCTACGCCGTGGTCTGAGCCTGGAAGGCTATCA GGTTGATGTGGCCTTCGATGGGACACGCGGGCTTGAGCTGGCATCGACGGGCACGTATGATCTGATTGTCCTTGACCTCA TGTTGCCGGGGATCGATGGTCTCGAAGTCGCTCGTCGTCTCCGTGCCGACTCGAACGTACCGATCATTATGCTCACGGCG CGTGATGCCGTGCGTGATCGGGTGGCCGGTCTGGAAGCCGGCGCCGATGATTATCTGGTGAAGCCGTTTGCCTTTGAAGA GCTGCTCGCCCGCATTCGGGCACAGTTGCGGCGTCGGCAGTCCGGGCAGGCGCAGGATGTGCTGCGTTTCGCCAATTTAA CTCTCGATACGCGCTCGCGTGAGTTGCGGGTAGGAGACCGGCGTGTCGAGCTGACGGCGAAAGAGTACGATCTGCTCGAA CTCTTTATGCGTCATCCCAATCAGGTGCTGACTCGCGATATTATTTACGACCGGGTCTGGAATTACGACTTCGGCGGCGA GAGTAATATTCTGGAAGTGTACGTGCGCTATTTGCGGCAGAAGCTTGAGGCGAATGGTGAGCCGCGCCTGATCCATACTG TTCGCAGTGTGGGGTACATTCTCCGCGAAGATACCTGA
Upstream 100 bases:
>100_bases CTCAAGGTTGCGATGTTGTATTTCACGACGACTATACCAGATATGATATGAGCCAGTATGCAAAATTGACGGTTGCGCTT CCTGTTCGTATACTAAAGGC
Downstream 100 bases:
>100_bases TCGTTTAGGAGACGCGAAGGGCCATTCGCCCTTCGCGTCTCTGTTACGGTGTTGGTTGGGGTTGGGTTTCGCCAAGTGCC GCGAAGAGCTGCTGAACGGC
Product: winged helix family two component transcriptional regulator
Products: NA
Alternate protein names: Mycobacterial persistence regulator A [H]
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MTRILVIEDETEIASFLRRGLSLEGYQVDVAFDGTRGLELASTGTYDLIVLDLMLPGIDGLEVARRLRADSNVPIIMLTA RDAVRDRVAGLEAGADDYLVKPFAFEELLARIRAQLRRRQSGQAQDVLRFANLTLDTRSRELRVGDRRVELTAKEYDLLE LFMRHPNQVLTRDIIYDRVWNYDFGGESNILEVYVRYLRQKLEANGEPRLIHTVRSVGYILREDT
Sequences:
>Translated_225_residues MTRILVIEDETEIASFLRRGLSLEGYQVDVAFDGTRGLELASTGTYDLIVLDLMLPGIDGLEVARRLRADSNVPIIMLTA RDAVRDRVAGLEAGADDYLVKPFAFEELLARIRAQLRRRQSGQAQDVLRFANLTLDTRSRELRVGDRRVELTAKEYDLLE LFMRHPNQVLTRDIIYDRVWNYDFGGESNILEVYVRYLRQKLEANGEPRLIHTVRSVGYILREDT >Mature_224_residues TRILVIEDETEIASFLRRGLSLEGYQVDVAFDGTRGLELASTGTYDLIVLDLMLPGIDGLEVARRLRADSNVPIIMLTAR DAVRDRVAGLEAGADDYLVKPFAFEELLARIRAQLRRRQSGQAQDVLRFANLTLDTRSRELRVGDRRVELTAKEYDLLEL FMRHPNQVLTRDIIYDRVWNYDFGGESNILEVYVRYLRQKLEANGEPRLIHTVRSVGYILREDT
Specific function: Member of the two-component regulatory system mprB/mprA which contributes to maintaining a balance among several systems involved in stress resistance and is required for establishment and maintenance of persistent infection in the host. Functions as a tr
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=46.3636363636364, Blast_Score=204, Evalue=4e-54, Organism=Escherichia coli, GI87082012, Length=217, Percent_Identity=41.4746543778802, Blast_Score=175, Evalue=3e-45, Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=42.7927927927928, Blast_Score=162, Evalue=1e-41, Organism=Escherichia coli, GI1786599, Length=220, Percent_Identity=38.6363636363636, Blast_Score=159, Evalue=2e-40, Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=42.5339366515837, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=42.2727272727273, Blast_Score=154, Evalue=3e-39, Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=37.8260869565217, Blast_Score=147, Evalue=5e-37, Organism=Escherichia coli, GI1787375, Length=220, Percent_Identity=36.8181818181818, Blast_Score=135, Evalue=2e-33, Organism=Escherichia coli, GI1790860, Length=222, Percent_Identity=35.1351351351351, Blast_Score=120, Evalue=6e-29, Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=36.9565217391304, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1788394, Length=221, Percent_Identity=33.4841628959276, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1787229, Length=233, Percent_Identity=33.9055793991416, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1790863, Length=226, Percent_Identity=30.9734513274336, Blast_Score=107, Evalue=9e-25, Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=30.9012875536481, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=31.1926605504587, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790437, Length=123, Percent_Identity=30.8943089430894, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI48994928, Length=114, Percent_Identity=35.9649122807018, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1788191, Length=121, Percent_Identity=33.8842975206612, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788713, Length=85, Percent_Identity=40, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1790299, Length=134, Percent_Identity=27.6119402985075, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25845; Mature: 25714
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRILVIEDETEIASFLRRGLSLEGYQVDVAFDGTRGLELASTGTYDLIVLDLMLPGIDG CCEEEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECCCCHHHHHEEHHHCCCCH LEVARRLRADSNVPIIMLTARDAVRDRVAGLEAGADDYLVKPFAFEELLARIRAQLRRRQ HHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHC SGQAQDVLRFANLTLDTRSRELRVGDRRVELTAKEYDLLELFMRHPNQVLTRDIIYDRVW CCCHHHHHHHHHCEECCCCCEEECCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHC NYDFGGESNILEVYVRYLRQKLEANGEPRLIHTVRSVGYILREDT CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TRILVIEDETEIASFLRRGLSLEGYQVDVAFDGTRGLELASTGTYDLIVLDLMLPGIDG CEEEEEECCHHHHHHHHHCCCCCCEEEEEEECCCCCCEEECCCCHHHHHEEHHHCCCCH LEVARRLRADSNVPIIMLTARDAVRDRVAGLEAGADDYLVKPFAFEELLARIRAQLRRRQ HHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHC SGQAQDVLRFANLTLDTRSRELRVGDRRVELTAKEYDLLELFMRHPNQVLTRDIIYDRVW CCCHHHHHHHHHCEECCCCCEEECCCEEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHC NYDFGGESNILEVYVRYLRQKLEANGEPRLIHTVRSVGYILREDT CCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA