| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yqgN [H]
Identifier: 222525921
GI number: 222525921
Start: 3309227
End: 3309808
Strand: Direct
Name: yqgN [H]
Synonym: Chy400_2676
Alternate gene names: 222525921
Gene position: 3309227-3309808 (Clockwise)
Preceding gene: 222525920
Following gene: 222525922
Centisome position: 62.81
GC content: 59.28
Gene sequence:
>582_bases ATGACCGACGTTGCCGATCAGAAAGCAGCTCTGCGTGCTCTGATGCAAGCGCGTCGTGATGCGTTAGCTGATCGCGATCA GCGAAGTGTCCGCATTTGTGCACTGGTGCAGTCGCTGCCCGTATTTACGGCGGCCCGGGCAATTCACTGCTACGTTCCAA TGCGCTCGGAAGTGGATACCCGGCCTCTCATCGTGGCTGCTTTGGCGGCAGGAAAGGCTGTGGCAGTGCCGGTTGTCGGG GGACAACGAGAGCTTCGTCATAGCTGGATCGCCAGTCTGTCTGAAGAGGATTGGGTGCCTGGCCGGTTTGGTACTCGCCG GCCACGTCGCCTCATGCCTGCGTACCCGGGTGAATGGTCGCTAACGATTGTGCCTTTGCTGGCATTTGATCGCGATCTGT ACCGCCTGGGGTATGGTGGTGGCTACTACGATGCGCTGTTGGCAACTGCATCGACCGTCGCTGTTGGTGTGGCCTTTGCC GATCAGGAGGTCGCTGAACTTCCCCGTGAAGCCCACGATTACCCGCTTGATCTGGTCGTCTGCGAGGATGGCATTCGTCG CCGACATGAGCATTACCGGTAG
Upstream 100 bases:
>100_bases GCGGTTAGCTGTTTGTCACTTGCGGCCACTTCAATGAACCGGCTCGTTGCCCGGCACAACAAGCCGGTGGTTGCGAAGAT GCCATTGCGCAGGAGTAATC
Downstream 100 bases:
>100_bases CGATTTCTTATCTGGCATCGTAAGCTGCTCTGCGGTATCATACATCAGAGAGGGCCTGATTTCCGTTGCCGACCGATGAA CAGTTCGTTAACCCCGCTTG
Product: 5-formyltetrahydrofolate cyclo-ligase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTDVADQKAALRALMQARRDALADRDQRSVRICALVQSLPVFTAARAIHCYVPMRSEVDTRPLIVAALAAGKAVAVPVVG GQRELRHSWIASLSEEDWVPGRFGTRRPRRLMPAYPGEWSLTIVPLLAFDRDLYRLGYGGGYYDALLATASTVAVGVAFA DQEVAELPREAHDYPLDLVVCEDGIRRRHEHYR
Sequences:
>Translated_193_residues MTDVADQKAALRALMQARRDALADRDQRSVRICALVQSLPVFTAARAIHCYVPMRSEVDTRPLIVAALAAGKAVAVPVVG GQRELRHSWIASLSEEDWVPGRFGTRRPRRLMPAYPGEWSLTIVPLLAFDRDLYRLGYGGGYYDALLATASTVAVGVAFA DQEVAELPREAHDYPLDLVVCEDGIRRRHEHYR >Mature_192_residues TDVADQKAALRALMQARRDALADRDQRSVRICALVQSLPVFTAARAIHCYVPMRSEVDTRPLIVAALAAGKAVAVPVVGG QRELRHSWIASLSEEDWVPGRFGTRRPRRLMPAYPGEWSLTIVPLLAFDRDLYRLGYGGGYYDALLATASTVAVGVAFAD QEVAELPREAHDYPLDLVVCEDGIRRRHEHYR
Specific function: Unknown
COG id: COG0212
COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]
Homologues:
Organism=Escherichia coli, GI1789278, Length=181, Percent_Identity=29.2817679558011, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002698 [H]
Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]
EC number: NA
Molecular weight: Translated: 21484; Mature: 21353
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDVADQKAALRALMQARRDALADRDQRSVRICALVQSLPVFTAARAIHCYVPMRSEVDT CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC RPLIVAALAAGKAVAVPVVGGQRELRHSWIASLSEEDWVPGRFGTRRPRRLMPAYPGEWS CHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTIVPLLAFDRDLYRLGYGGGYYDALLATASTVAVGVAFADQEVAELPREAHDYPLDLVV EEEEHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCEEEEE CEDGIRRRHEHYR ECHHHHHHHHCCC >Mature Secondary Structure TDVADQKAALRALMQARRDALADRDQRSVRICALVQSLPVFTAARAIHCYVPMRSEVDT CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC RPLIVAALAAGKAVAVPVVGGQRELRHSWIASLSEEDWVPGRFGTRRPRRLMPAYPGEWS CHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC LTIVPLLAFDRDLYRLGYGGGYYDALLATASTVAVGVAFADQEVAELPREAHDYPLDLVV EEEEHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHCCCCEEEEE CEDGIRRRHEHYR ECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]