| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222525922
Identifier: 222525922
GI number: 222525922
Start: 3309999
End: 3311480
Strand: Direct
Name: 222525922
Synonym: Chy400_2677
Alternate gene names: NA
Gene position: 3309999-3311480 (Clockwise)
Preceding gene: 222525921
Following gene: 222525925
Centisome position: 62.82
GC content: 58.57
Gene sequence:
>1482_bases ATGCGCGCCAGCGATTTGCCGATGATTATTCAGGGTGGTATGGGTGCCGCCGTTTCCGATTGGCGACTGGCACGGGCGGT TGCAGCCTGTGGTCAGCTCGGTGTTGTCTCTGGTACCGGTATCGATACCATTCTGATTCGGCGTTTGCAGGATGGCGATC CTGATGGCGCTATGCGACGAGCAATGGCGCATTTTCCGATTCCTGGCGTGGCCGAACGTGTGTTAACCGCCTATTTCCGG CCTGATGGTCGTGCCCCAGGTGAGCCTTACGATCTGTTGCCGATGTACAACTTGAAGGTGAGTAAGGAACGGCAGCAGAT AGCCATCCTGGCGGCATTTGTTGAGGTGTGGCTGGCGAAAGAGGGTCATGATCGCCCAATTGGCATGAATCTGTTGACCA AGATTCAATTGCCCAACCTTGCGCTGCTCTACGGTGCACTGCTGGCAGGAGTCGATGTGATCATTATGGGAGCGGGTATT CCGCGCGAGATTCCGGCTGCACTCGATGCGCTGGCTGCGCATCTTCCTGCTCGCCTGACTGCCGAGATCGAAGGCGATGA AGGTGCACCTCCTACATACATAACGTTTGATCCGCGTGAACACTGGGCTGGTGAACCACCGCCACTGCGTCGTCCGCTCT TTCTTCCCATCGTCGCCAGTGTTACGCTGGCAACCATGTTCGCACGCAAGATCGCTGGTGTTGATGGATTGGTCATCGAG GGGCCAACCGCAGGCGGTCATAATGCGCCGCCGCGTGGCGAATTGCAGCTAAACGAACGTGGCGAGCCGTTGTATGGGCC GCGTGATCTGGTTGATCCGACAAAGGTTGCAGCCCTTGGCCTACCCTTCTGGCTGGCTGGTGGTACCGCTTCGCCGGAAG GGCTGGCCGCAGCACGGGCTGCCGGGGCGATGGGTATTCAGGTTGGGACGCTGTTTGCCTTCTGTAACGACTCTGGACTG GCCGAACCGCTGCGGCGTTCGGTGCTCGACGCAGCAGCGCGTGGTACGGTTGATGTCTTTACCGATCCGCGCGCATCGCC GACCGGCTACCCGTTCAAGGTGGTACGCTGGGATAACGATCCCGCCCAGGGAGTCCCGCGCCAGCGGATTTGTGACCTGG GTTATTTGCGAACAATGTATCGCACACCAAAAGGGACGATTGGCTATCGCTGTGCCAGTGAACCGATTGCCACCTTTGTG AAGAAGGGTGGTAATCTGTGCGATACCGAGGGTCGGCGGTGCCTGTGCAATGCGTTGATGTCGAATATTGGCGTTGGTCA GGCCCGCGCCGATATTGGTGTCGAACCGCCGTTGCTTACGAGCGGTGATGATTTGCGGCGTCTACCCACCATCTTTGATG TGACGCAGGGCTATTCGGCTGCCGATGTGATAGCGTATCTGCTCGGTCAACGTCCACCGGTTGCGGCCATATCGCTGGCA ACGAAGCCGGCTGCGACGGTAGCCGATCAGGTTGGTATCTAG
Upstream 100 bases:
>100_bases ACCCCGCTTGTTGCTACACGGAAGCAGTTGCTGCCTCTGGGTCGTATCTGGCAGCGATAGTGTTCGTTTGCCTGTTGAAA TGTATAAGGAGTGGAGATCG
Downstream 100 bases:
>100_bases CGCGCCCAGGTCAGCCCACCATCGGCATTGATGGCAAAGTCGGTCGAAAGCCGGCGGGGCGGACTGAGTTGCAGAGTGTC GCCAGCGATGGCTACTTCGG
Product: putative 2-nitropropane dioxygenase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Oxidoreductase
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MRASDLPMIIQGGMGAAVSDWRLARAVAACGQLGVVSGTGIDTILIRRLQDGDPDGAMRRAMAHFPIPGVAERVLTAYFR PDGRAPGEPYDLLPMYNLKVSKERQQIAILAAFVEVWLAKEGHDRPIGMNLLTKIQLPNLALLYGALLAGVDVIIMGAGI PREIPAALDALAAHLPARLTAEIEGDEGAPPTYITFDPREHWAGEPPPLRRPLFLPIVASVTLATMFARKIAGVDGLVIE GPTAGGHNAPPRGELQLNERGEPLYGPRDLVDPTKVAALGLPFWLAGGTASPEGLAAARAAGAMGIQVGTLFAFCNDSGL AEPLRRSVLDAAARGTVDVFTDPRASPTGYPFKVVRWDNDPAQGVPRQRICDLGYLRTMYRTPKGTIGYRCASEPIATFV KKGGNLCDTEGRRCLCNALMSNIGVGQARADIGVEPPLLTSGDDLRRLPTIFDVTQGYSAADVIAYLLGQRPPVAAISLA TKPAATVADQVGI
Sequences:
>Translated_493_residues MRASDLPMIIQGGMGAAVSDWRLARAVAACGQLGVVSGTGIDTILIRRLQDGDPDGAMRRAMAHFPIPGVAERVLTAYFR PDGRAPGEPYDLLPMYNLKVSKERQQIAILAAFVEVWLAKEGHDRPIGMNLLTKIQLPNLALLYGALLAGVDVIIMGAGI PREIPAALDALAAHLPARLTAEIEGDEGAPPTYITFDPREHWAGEPPPLRRPLFLPIVASVTLATMFARKIAGVDGLVIE GPTAGGHNAPPRGELQLNERGEPLYGPRDLVDPTKVAALGLPFWLAGGTASPEGLAAARAAGAMGIQVGTLFAFCNDSGL AEPLRRSVLDAAARGTVDVFTDPRASPTGYPFKVVRWDNDPAQGVPRQRICDLGYLRTMYRTPKGTIGYRCASEPIATFV KKGGNLCDTEGRRCLCNALMSNIGVGQARADIGVEPPLLTSGDDLRRLPTIFDVTQGYSAADVIAYLLGQRPPVAAISLA TKPAATVADQVGI >Mature_493_residues MRASDLPMIIQGGMGAAVSDWRLARAVAACGQLGVVSGTGIDTILIRRLQDGDPDGAMRRAMAHFPIPGVAERVLTAYFR PDGRAPGEPYDLLPMYNLKVSKERQQIAILAAFVEVWLAKEGHDRPIGMNLLTKIQLPNLALLYGALLAGVDVIIMGAGI PREIPAALDALAAHLPARLTAEIEGDEGAPPTYITFDPREHWAGEPPPLRRPLFLPIVASVTLATMFARKIAGVDGLVIE GPTAGGHNAPPRGELQLNERGEPLYGPRDLVDPTKVAALGLPFWLAGGTASPEGLAAARAAGAMGIQVGTLFAFCNDSGL AEPLRRSVLDAAARGTVDVFTDPRASPTGYPFKVVRWDNDPAQGVPRQRICDLGYLRTMYRTPKGTIGYRCASEPIATFV KKGGNLCDTEGRRCLCNALMSNIGVGQARADIGVEPPLLTSGDDLRRLPTIFDVTQGYSAADVIAYLLGQRPPVAAISLA TKPAATVADQVGI
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52266; Mature: 52266
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRASDLPMIIQGGMGAAVSDWRLARAVAACGQLGVVSGTGIDTILIRRLQDGDPDGAMRR CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHH AMAHFPIPGVAERVLTAYFRPDGRAPGEPYDLLPMYNLKVSKERQQIAILAAFVEVWLAK HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCHHHHHHHHHHHHHHHHHC EGHDRPIGMNLLTKIQLPNLALLYGALLAGVDVIIMGAGIPREIPAALDALAAHLPARLT CCCCCCCCCHHHEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCEEE AEIEGDEGAPPTYITFDPREHWAGEPPPLRRPLFLPIVASVTLATMFARKIAGVDGLVIE EEECCCCCCCCCEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE GPTAGGHNAPPRGELQLNERGEPLYGPRDLVDPTKVAALGLPFWLAGGTASPEGLAAARA CCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCHHHHHHHCCCCEECCCCCCCHHHHHHHH AGAMGIQVGTLFAFCNDSGLAEPLRRSVLDAAARGTVDVFTDPRASPTGYPFKVVRWDND HCCCCEEHHHEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCC PAQGVPRQRICDLGYLRTMYRTPKGTIGYRCASEPIATFVKKGGNLCDTEGRRCLCNALM CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCHHHHHHHHH SNIGVGQARADIGVEPPLLTSGDDLRRLPTIFDVTQGYSAADVIAYLLGQRPPVAAISLA HHCCCCCHHHCCCCCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEC TKPAATVADQVGI CCCHHHHHHHCCC >Mature Secondary Structure MRASDLPMIIQGGMGAAVSDWRLARAVAACGQLGVVSGTGIDTILIRRLQDGDPDGAMRR CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHH AMAHFPIPGVAERVLTAYFRPDGRAPGEPYDLLPMYNLKVSKERQQIAILAAFVEVWLAK HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCEECCHHHHHHHHHHHHHHHHHC EGHDRPIGMNLLTKIQLPNLALLYGALLAGVDVIIMGAGIPREIPAALDALAAHLPARLT CCCCCCCCCHHHEEECCCCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHCCCEEE AEIEGDEGAPPTYITFDPREHWAGEPPPLRRPLFLPIVASVTLATMFARKIAGVDGLVIE EEECCCCCCCCCEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE GPTAGGHNAPPRGELQLNERGEPLYGPRDLVDPTKVAALGLPFWLAGGTASPEGLAAARA CCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCHHHHHHHCCCCEECCCCCCCHHHHHHHH AGAMGIQVGTLFAFCNDSGLAEPLRRSVLDAAARGTVDVFTDPRASPTGYPFKVVRWDND HCCCCEEHHHEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCC PAQGVPRQRICDLGYLRTMYRTPKGTIGYRCASEPIATFVKKGGNLCDTEGRRCLCNALM CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHCCCCCCCCCCHHHHHHHHH SNIGVGQARADIGVEPPLLTSGDDLRRLPTIFDVTQGYSAADVIAYLLGQRPPVAAISLA HHCCCCCHHHCCCCCCCCCCCCCHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEC TKPAATVADQVGI CCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA