| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is hmuT [H]
Identifier: 222525864
GI number: 222525864
Start: 3253082
End: 3254146
Strand: Direct
Name: hmuT [H]
Synonym: Chy400_2617
Alternate gene names: 222525864
Gene position: 3253082-3254146 (Clockwise)
Preceding gene: 222525863
Following gene: 222525865
Centisome position: 61.74
GC content: 57.75
Gene sequence:
>1065_bases ATGTGGCCGAAGCTCGTTAAGTCGCTAACCCTTGCTCTCGTTCTGGTTTTGCTGAGTGCTTGTGGAGCCGGATCAACGGC AACAGTACCGACAGCGGTACCGGAACCAACGGCGATACCAACTGCTATTCCTGCGCCGACTGCTGCTCCTGTGCCAACGA CAGCGCCGGTCGCTGAACCTGAACCGACCAGTGCTGTACTTACGCCTGTTTTACCGGCAACGGTGACCGATTATCAGGGT GAGACGGTGGTGGTTGAGTCCGTTGACCGGATTGTCAGTCTTACCGGCGATATTACCGAGATCATCTTCGCGCTGGGAAT GGGTGACTATATCGTTGGTGTGGACTCCAGTGCGACGTATCCTGCCGAGAAGACCAAGTCCCTGCCTAACATTGGCTATC AACGGCGTTTGAATGCCGAAGGTATTCTGGCGTTGAACCCGACGCTGGTGATTGGTGATGAGGCTGCCGGCCCACCGGAG GCGCTGGCGCAGATTCGTTCTGCGGGTGTTCCGGTAGCGTTGGTGGCTGATCCGCCGACGATGGATGCGCCGATGCAGAA GATTCTCTTTGTGGCCCGCGCCCTCGGCATTCCTGAACGAGGATACGAGCTTGCCGGCCAGGTGGAGGCAGAGATTGCGC GTGCCCGGGCTGATGCTGCAACGCTACCTCGACCACCCCGTGTATTGTTCCTCTATCTGCGGGGGACTGATGTTCAGCAG GTGGCAGGTGCCAATACTGCGATTGATGCCATGATTACCGCCGCCGGTGGTGTCAACGCGGCAACTGAGGCCGGTATCGT AAACTACGCGCCGTTGAGTGCAGAGGTTGTAATCGCTGCGCAGCCTGATGTCATTCTGGTGCTCACTAAAGGTCTGGAGT CGGTTGGTGGTGTTGATGGTCTCTTGCAAATTCCCGGTCTTGCCGACACTCCAGCCGGTCAACAGCGTCGGGTGGTAGAC TTCGATGATCTCTATCTGTTGGGGATGGGGCCACGCACCGGTCAGGCATTGGCCGATCTGGTGGCAGCATTCAAGGATGC TGTAGCACAAACGGGTGGATCATGA
Upstream 100 bases:
>100_bases GATGTGTACGGTGTGCCGGTTACGGTGCAACCGCATCCGCGAGCGGCAACACCTCTTGTTTTGAGCTTACCAGAAGATAT GACGGGGAGTAGATATACCT
Downstream 100 bases:
>100_bases GTGTGACGTCCGTTGCTCCTGGCCTCCGCTTACGTTTTGCCGGGCGGGGCTGGTTATTGCCGATACTGGCAGTGGTCTTG TCTGTAGCATTCTTGTTGGG
Product: periplasmic binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEPEPTSAVLTPVLPATVTDYQG ETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATYPAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPE ALAQIRSAGVPVALVADPPTMDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDGLLQIPGLADTPAGQQRRVVD FDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS
Sequences:
>Translated_354_residues MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEPEPTSAVLTPVLPATVTDYQG ETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATYPAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPE ALAQIRSAGVPVALVADPPTMDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDGLLQIPGLADTPAGQQRRVVD FDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS >Mature_354_residues MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEPEPTSAVLTPVLPATVTDYQG ETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATYPAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPE ALAQIRSAGVPVALVADPPTMDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDGLLQIPGLADTPAGQQRRVVD FDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS
Specific function: Part of the binding-protein-dependent transport system for hemin [H]
COG id: COG4558
COG function: function code P; ABC-type hemin transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 36161; Mature: 36161
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEP CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPTSAVLTPVLPATVTDYQGETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATY CCCCHHHCCCCCCEECCCCCCEEEEEHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCC PAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPEALAQIRSAGVPVALVADPPT CHHHHCCCCCCCHHHCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCC MDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEEEECCCHHH VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDG HHCCCHHHHHHEECCCCCCCHHHCCCEEECCCCEEEEEEECCCEEEEEECCHHHHCCCCC LLQIPGLADTPAGQQRRVVDFDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS EEECCCCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEP CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EPTSAVLTPVLPATVTDYQGETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATY CCCCHHHCCCCCCEECCCCCCEEEEEHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCC PAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPEALAQIRSAGVPVALVADPPT CHHHHCCCCCCCHHHCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCC MDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEEEECCCHHH VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDG HHCCCHHHHHHEECCCCCCCHHHCCCEEECCCCEEEEEEECCCEEEEEECCHHHHCCCCC LLQIPGLADTPAGQQRRVVDFDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS EEECCCCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9026634; 11586360; 12142430 [H]