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The map label for this gene is yqeN [H]

Identifier: 222525854

GI number: 222525854

Start: 3243305

End: 3244276

Strand: Direct

Name: yqeN [H]

Synonym: Chy400_2607

Alternate gene names: 222525854

Gene position: 3243305-3244276 (Clockwise)

Preceding gene: 222525853

Following gene: 222525856

Centisome position: 61.56

GC content: 55.25

Gene sequence:

>972_bases
ATGATTTATCTGTTTTACGGACCCAATGAACTGGCGCGCAGCGAGGCGGTGGCTGAGTTGCGGGCCGGTTTGCCCGCAGA
GGTCGCTGACCTCAACGTCAGTGTGCTTGATGGGCGGAAGCTCACTATCGAGCAACTGGTTGCGGCATGTGAGGCACACC
CGTTTCTTGCCGAGCGGCGACTGGTGATCGTCTACGATGCGTTGAAGCATAGTAAGGCAGGGAAGGGGCGCGAAGAATTA
CGTAGTTATTGCGAGCGTGTGCCGGCAACCTGTGATCTGGTGTTTGTGGAGCAAGAAGAGGTTGATCGCCGACATCTGCT
TTTCACATACCTCAGCAAGCATGGTGTCGTTCGTGAATTCCCGTTGCTCCAGGGAGCAGAGTTACTCCGCTGGATTGAAC
AGCGGGCGAAGATGCTGCATGCGACGATTGAATCTGCCGCCGCCCAACGTCTGGTCGAACTGGCAGGGAATGATAGCCGG
TTACTGGCTAACGAGCTGGCCAAACTGGCCAGTTATGTGGGTCGCAATGGGAAGATCGATCTGCGGGCTGTAGATCGCCT
GGTTACCGATCAACAAGAGCAAAATCTGTTTGCCTTTCTCGATGAATTAAGTTCGCGACGGTTAGGGCCGGCATTACGCG
GCGCACGAGCACTGGTTGAAGATGGCCAGGCACCGCCCTACGTGCTCTTTATGCTGGCTCGTCAGATCAGAATTCTCTTG
CAGGTCAGGCAACTGCTCAGTCAACGGCGTCGCGCTGATGAGATTGCTGCCGAGCTGAACCTGAAACCATTCGTGGCCCG
AAAGGCAACTGAACAGGCGCGTAACTTCAGCCTTCCCGAACTGATACACGCCCATGATCGTCTGCTCGAACTTGATCACG
CGATCAAGACCGGACGTATCCAGGCCGAAACAGCACTTGAACTATTTGTTGTGGAAGTGTGTCAGATGCCGCAAGAGGTG
GGGAAGCGTTAG

Upstream 100 bases:

>100_bases
GCCATACCTCAGCGCGCTTCAGTCCTCGATCCATCATTAGCCGACCGGGCTGCCCGTCTCGTGGTAGCAATTGCTCAGGC
CCTTGATACAGAGAATAACC

Downstream 100 bases:

>100_bases
CAGCTCCCAGCACAGACACTACAGAGCAGTTACGGGAGAAAATACGGTTATACGTGTAAAGGGGAGAAAGAAAAAAGGGC
AACACTGTGTTATGGAAAGC

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MIYLFYGPNELARSEAVAELRAGLPAEVADLNVSVLDGRKLTIEQLVAACEAHPFLAERRLVIVYDALKHSKAGKGREEL
RSYCERVPATCDLVFVEQEEVDRRHLLFTYLSKHGVVREFPLLQGAELLRWIEQRAKMLHATIESAAAQRLVELAGNDSR
LLANELAKLASYVGRNGKIDLRAVDRLVTDQQEQNLFAFLDELSSRRLGPALRGARALVEDGQAPPYVLFMLARQIRILL
QVRQLLSQRRRADEIAAELNLKPFVARKATEQARNFSLPELIHAHDRLLELDHAIKTGRIQAETALELFVVEVCQMPQEV
GKR

Sequences:

>Translated_323_residues
MIYLFYGPNELARSEAVAELRAGLPAEVADLNVSVLDGRKLTIEQLVAACEAHPFLAERRLVIVYDALKHSKAGKGREEL
RSYCERVPATCDLVFVEQEEVDRRHLLFTYLSKHGVVREFPLLQGAELLRWIEQRAKMLHATIESAAAQRLVELAGNDSR
LLANELAKLASYVGRNGKIDLRAVDRLVTDQQEQNLFAFLDELSSRRLGPALRGARALVEDGQAPPYVLFMLARQIRILL
QVRQLLSQRRRADEIAAELNLKPFVARKATEQARNFSLPELIHAHDRLLELDHAIKTGRIQAETALELFVVEVCQMPQEV
GKR
>Mature_323_residues
MIYLFYGPNELARSEAVAELRAGLPAEVADLNVSVLDGRKLTIEQLVAACEAHPFLAERRLVIVYDALKHSKAGKGREEL
RSYCERVPATCDLVFVEQEEVDRRHLLFTYLSKHGVVREFPLLQGAELLRWIEQRAKMLHATIESAAAQRLVELAGNDSR
LLANELAKLASYVGRNGKIDLRAVDRLVTDQQEQNLFAFLDELSSRRLGPALRGARALVEDGQAPPYVLFMLARQIRILL
QVRQLLSQRRRADEIAAELNLKPFVARKATEQARNFSLPELIHAHDRLLELDHAIKTGRIQAETALELFVVEVCQMPQEV
GKR

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: 2.7.7.7

Molecular weight: Translated: 36513; Mature: 36513

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYLFYGPNELARSEAVAELRAGLPAEVADLNVSVLDGRKLTIEQLVAACEAHPFLAERR
CEEEEECCCHHHHHHHHHHHHCCCCCHHHHCEEEEECCCCHHHHHHHHHHHCCCHHHHCC
LVIVYDALKHSKAGKGREELRSYCERVPATCDLVFVEQEEVDRRHLLFTYLSKHGVVREF
EEEEEHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCHHHC
PLLQGAELLRWIEQRAKMLHATIESAAAQRLVELAGNDSRLLANELAKLASYVGRNGKID
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH
LRAVDRLVTDQQEQNLFAFLDELSSRRLGPALRGARALVEDGQAPPYVLFMLARQIRILL
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QVRQLLSQRRRADEIAAELNLKPFVARKATEQARNFSLPELIHAHDRLLELDHAIKTGRI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
QAETALELFVVEVCQMPQEVGKR
HHHHHHHHHHHHHHHCHHHHCCC
>Mature Secondary Structure
MIYLFYGPNELARSEAVAELRAGLPAEVADLNVSVLDGRKLTIEQLVAACEAHPFLAERR
CEEEEECCCHHHHHHHHHHHHCCCCCHHHHCEEEEECCCCHHHHHHHHHHHCCCHHHHCC
LVIVYDALKHSKAGKGREELRSYCERVPATCDLVFVEQEEVDRRHLLFTYLSKHGVVREF
EEEEEHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCHHHC
PLLQGAELLRWIEQRAKMLHATIESAAAQRLVELAGNDSRLLANELAKLASYVGRNGKID
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCH
LRAVDRLVTDQQEQNLFAFLDELSSRRLGPALRGARALVEDGQAPPYVLFMLARQIRILL
HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QVRQLLSQRRRADEIAAELNLKPFVARKATEQARNFSLPELIHAHDRLLELDHAIKTGRI
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
QAETALELFVVEVCQMPQEVGKR
HHHHHHHHHHHHHHHCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]