| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mviN [H]
Identifier: 222525856
GI number: 222525856
Start: 3244780
End: 3246345
Strand: Direct
Name: mviN [H]
Synonym: Chy400_2609
Alternate gene names: 222525856
Gene position: 3244780-3246345 (Clockwise)
Preceding gene: 222525854
Following gene: 222525857
Centisome position: 61.58
GC content: 57.47
Gene sequence:
>1566_bases GTGCAACTGAGTACCGTCCTCCACCGTCTGAGCGCTCAGCGTAACAGTCTGATCGTCATGGGTGGTTTCATCTTAAGCCG GATAACCGGGCTGATACGTGACATCGTGGCTTCATACTATTTTGGTACTTCGGCTGAAATGGCTGCCTACGGTGCTGCTA TCAGCACGGTTGATCTGCTATACCTGGTGATTATCGGTGGGGCGCTGGGGAGCAGTTTTATTCCGGTGTTTATTGAATTG TGGGAGCGTGAACATCCGGTACGAGCCTGGGAGCTGGCCGGAGCGGTTGTGACCTGGGCCTTGATTATTCTCGGCGTGGC CAGTGCCATCCTGTTCCTGGCCGCGCCGTGGCTGGTGCCACTGCTGTATGGGGGAGAGGGGGTTTCGTCGGCGACGCTTG ATCTGATTGTAGCACTTACCCGGCTCTTCCTGCTCTCGCCGTTGCTGTTAGGTTTGGGTGGCCTGGCAATGGCTGCGCTG AACGCACGGGATCGCTTCACCATGCCTGCGTTAGCACCGAGTATTTACAACCTCGGCATTACCGCCGGCGCATTATGCGC GCCATGGTTGGGCATTTGGGGCATGGCATGGGGGGTTGTCATTGGCGCGTTGGGGTATTTGTGCATTCAGATACCGGCAC TACGCGATCTAGGGATGCACCTGCGACCGCACCTTGGTCGTCACTTGCCAGAGCTAGGGAGAGTCGCCCGTGCAATGGGA CCGCGTGTTATTGGTCAGGCAGCAGCCCACCTGAGTATTGTGGCAACGCTTGCGCTGGCAGCCCGTTTGCCTGATGGTGA TGCCAAACTGGCCGGTTTGCGTTGGGCGTATCAATTGATGTTGCTGCCGTATGGTGTGTTTGCCCTGAGCCTGAGCACGG TTGCCTTCCCTCGTCTGGCCCGGCTGGTCGCAGAGGGTCAATTGCCGGAATTGATGGACGATGTGCGGGCCACGCTGGGA CGGATTCTCTGGTTGACCCTGCCGGCAACTGCCGCGCTGATTACGCTTGGCCCGGCCCTTGCCCGTGTGCTGTTTGAACG TGGGGCGTTTGATGCAGTGTCTCTGCAATATACCGCAGCCGCGTTGACCGGCTATGCGTTTGCTTTGCCGGCGTTTGCTG CTTCAGAGATCATGATTCGCACCTTTTACGCGATGCAACGTACCTGGCCGCCCGTGTTGATTGGACTGATGCAGGTAGCA ATCAATATCACGCTGGGGATGGTATTGCTGGCGCGAGGCGGGGATATTGGTAGTCTGGCTATTGCCTTCAGTATGGCGAA TTCAATTGAGGCGCTGTTGCTCGCGATGGTGCTGAGACGACATTTGCCGGGTATCTGGTATGCGCCAGATTTGTGGAAGC GGATGATTTCGGCCCTCTTTAGCAGCGTGGTTATTGGCCTGGGCTGGTGGTATATGCGAGAGCTGATACCCGGTGCGACG CCTTTTTCTGCGTATCGCTGGCCGGACGATCTTCCTGGTTTGCTTATCGGGCTGATAGGATTGGGTGGAGGTGGGGCGGC TCTGTACGTGTTGTTTGAGGGTATCAGACGACGGTTCGCCAGGTGA
Upstream 100 bases:
>100_bases GTCAAACTCCTCGGATATAATTGGCACGTTATATGACACGTTAAGCGGCGAGCAAGCGCTCGCCGCGCTAGTTCTGAAGT ATAGCATAGGAACGCCGACC
Downstream 100 bases:
>100_bases GAGTGCGAACTGAAAGTCGATAGTGCTCTGGATGGGAAGAACACCACAGAGGTACCGAGGGCACAGGGAAGAGAGTGAGG GGTAACTATAGAAGTTATCT
Product: integral membrane protein MviN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 521
Protein sequence:
>521_residues MQLSTVLHRLSAQRNSLIVMGGFILSRITGLIRDIVASYYFGTSAEMAAYGAAISTVDLLYLVIIGGALGSSFIPVFIEL WEREHPVRAWELAGAVVTWALIILGVASAILFLAAPWLVPLLYGGEGVSSATLDLIVALTRLFLLSPLLLGLGGLAMAAL NARDRFTMPALAPSIYNLGITAGALCAPWLGIWGMAWGVVIGALGYLCIQIPALRDLGMHLRPHLGRHLPELGRVARAMG PRVIGQAAAHLSIVATLALAARLPDGDAKLAGLRWAYQLMLLPYGVFALSLSTVAFPRLARLVAEGQLPELMDDVRATLG RILWLTLPATAALITLGPALARVLFERGAFDAVSLQYTAAALTGYAFALPAFAASEIMIRTFYAMQRTWPPVLIGLMQVA INITLGMVLLARGGDIGSLAIAFSMANSIEALLLAMVLRRHLPGIWYAPDLWKRMISALFSSVVIGLGWWYMRELIPGAT PFSAYRWPDDLPGLLIGLIGLGGGGAALYVLFEGIRRRFAR
Sequences:
>Translated_521_residues MQLSTVLHRLSAQRNSLIVMGGFILSRITGLIRDIVASYYFGTSAEMAAYGAAISTVDLLYLVIIGGALGSSFIPVFIEL WEREHPVRAWELAGAVVTWALIILGVASAILFLAAPWLVPLLYGGEGVSSATLDLIVALTRLFLLSPLLLGLGGLAMAAL NARDRFTMPALAPSIYNLGITAGALCAPWLGIWGMAWGVVIGALGYLCIQIPALRDLGMHLRPHLGRHLPELGRVARAMG PRVIGQAAAHLSIVATLALAARLPDGDAKLAGLRWAYQLMLLPYGVFALSLSTVAFPRLARLVAEGQLPELMDDVRATLG RILWLTLPATAALITLGPALARVLFERGAFDAVSLQYTAAALTGYAFALPAFAASEIMIRTFYAMQRTWPPVLIGLMQVA INITLGMVLLARGGDIGSLAIAFSMANSIEALLLAMVLRRHLPGIWYAPDLWKRMISALFSSVVIGLGWWYMRELIPGAT PFSAYRWPDDLPGLLIGLIGLGGGGAALYVLFEGIRRRFAR >Mature_521_residues MQLSTVLHRLSAQRNSLIVMGGFILSRITGLIRDIVASYYFGTSAEMAAYGAAISTVDLLYLVIIGGALGSSFIPVFIEL WEREHPVRAWELAGAVVTWALIILGVASAILFLAAPWLVPLLYGGEGVSSATLDLIVALTRLFLLSPLLLGLGGLAMAAL NARDRFTMPALAPSIYNLGITAGALCAPWLGIWGMAWGVVIGALGYLCIQIPALRDLGMHLRPHLGRHLPELGRVARAMG PRVIGQAAAHLSIVATLALAARLPDGDAKLAGLRWAYQLMLLPYGVFALSLSTVAFPRLARLVAEGQLPELMDDVRATLG RILWLTLPATAALITLGPALARVLFERGAFDAVSLQYTAAALTGYAFALPAFAASEIMIRTFYAMQRTWPPVLIGLMQVA INITLGMVLLARGGDIGSLAIAFSMANSIEALLLAMVLRRHLPGIWYAPDLWKRMISALFSSVVIGLGWWYMRELIPGAT PFSAYRWPDDLPGLLIGLIGLGGGGAALYVLFEGIRRRFAR
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=424, Percent_Identity=27.3584905660377, Blast_Score=142, Evalue=8e-35,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 55902; Mature: 55902
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLSTVLHRLSAQRNSLIVMGGFILSRITGLIRDIVASYYFGTSAEMAAYGAAISTVDLL CCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YLVIIGGALGSSFIPVFIELWEREHPVRAWELAGAVVTWALIILGVASAILFLAAPWLVP HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYGGEGVSSATLDLIVALTRLFLLSPLLLGLGGLAMAALNARDRFTMPALAPSIYNLGI HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC TAGALCAPWLGIWGMAWGVVIGALGYLCIQIPALRDLGMHLRPHLGRHLPELGRVARAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHC PRVIGQAAAHLSIVATLALAARLPDGDAKLAGLRWAYQLMLLPYGVFALSLSTVAFPRLA CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLVAEGQLPELMDDVRATLGRILWLTLPATAALITLGPALARVLFERGAFDAVSLQYTAA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ALTGYAFALPAFAASEIMIRTFYAMQRTWPPVLIGLMQVAINITLGMVLLARGGDIGSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IAFSMANSIEALLLAMVLRRHLPGIWYAPDLWKRMISALFSSVVIGLGWWYMRELIPGAT HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PFSAYRWPDDLPGLLIGLIGLGGGGAALYVLFEGIRRRFAR CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQLSTVLHRLSAQRNSLIVMGGFILSRITGLIRDIVASYYFGTSAEMAAYGAAISTVDLL CCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YLVIIGGALGSSFIPVFIELWEREHPVRAWELAGAVVTWALIILGVASAILFLAAPWLVP HHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLYGGEGVSSATLDLIVALTRLFLLSPLLLGLGGLAMAALNARDRFTMPALAPSIYNLGI HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC TAGALCAPWLGIWGMAWGVVIGALGYLCIQIPALRDLGMHLRPHLGRHLPELGRVARAMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHC PRVIGQAAAHLSIVATLALAARLPDGDAKLAGLRWAYQLMLLPYGVFALSLSTVAFPRLA CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLVAEGQLPELMDDVRATLGRILWLTLPATAALITLGPALARVLFERGAFDAVSLQYTAA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ALTGYAFALPAFAASEIMIRTFYAMQRTWPPVLIGLMQVAINITLGMVLLARGGDIGSLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH IAFSMANSIEALLLAMVLRRHLPGIWYAPDLWKRMISALFSSVVIGLGWWYMRELIPGAT HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PFSAYRWPDDLPGLLIGLIGLGGGGAALYVLFEGIRRRFAR CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA