The gene/protein map for NC_012032 is currently unavailable.
Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is argS

Identifier: 222525439

GI number: 222525439

Start: 2767115

End: 2768839

Strand: Direct

Name: argS

Synonym: Chy400_2184

Alternate gene names: 222525439

Gene position: 2767115-2768839 (Clockwise)

Preceding gene: 222525438

Following gene: 222525440

Centisome position: 52.52

GC content: 57.04

Gene sequence:

>1725_bases
ATGCGCTACGCGCTCGAACGATTTATTAGCGATATTCAAGCGGCTATTGTCGCCACCGGCAAAGTACCGGCTGATCTGAT
TGAAATTACGACACCAAAACCAAACATTCCCGCTGATCGCACATTTGTGACCTTCAAAGCGGCAAAGGCACTCGGCGTCG
ATCCGGTGCGTCTGGCTGCCGATCTGGCAACGGCTATTGTTCCGCCACCCGATTCGCTGATTGGCGAGGTGACGGCTACC
GGTGCTTTTCTGAATTTTACGCTCCACCCACAGCGATTGGCCGCAGCCGTGATGGCAGAGATTGAGACATACGGCGATGC
CTACGGCTCTGTGGCCGATGGTGCTAACCGGACGGTGGTTATCGACTATTCATCACCCAACATCGCCAAGCGCATGCACG
TCGGTCATATCCGCTCAACGATTATCGGGCAGGCGTTAGTGCATATTTTCCGCGCCCTCGGTTATCGCGTGATCGGTGAT
AATCACCTGGGTGATTGGGGGACGCAGTTTGGTATTATCCTGGCCGCCATGCAGCGCTATGGTCGCCCGCAGAACGAAGG
TGAAGCGGCGATGGCCGAACTGGAGGCGCTGTACGCTCGCTACAACGCCGAGATGAAAGATAATCCGCCCCTTGAAGACG
AAGCCCGGCGCTGGTCGCTGGCTCTGGAGCAGGGCGATCCAACTGCCCGTGAGCTGTGGCAGTGGTGCGTTGATCTGACG
ATGCGGGCAGCCCAGCGCAACTATGACCGGCTGGGTGTCCGTTTCGATTACGCCTATGGCGAGAGTTTCTACGAAGCGAT
GCTGCCTGGGGTGATCGAAGAAGCGCTTCAATCGGGCGCAGCGTTTCGTGATGTTGATGGGGCGGTTGTCGCCGAACTTG
ATAAGCTGCCCCGGTTTATTGTGCAGCGGAGCGATGGTGGTACTGTCTACATCACCCGTGATATTGCGACGATTAAATTT
CGTTTGCAAGAGTTCAATCCCTCTCACATCATTTATGTGGTCGACGCCCGCCAGGAACTGCATTTTCGACAGCTCTTCGC
GATTGTGCGGGCAATGGGTTATGCCCTCGATGTTGAATTGATCCATGTCCCATTTGGCGTTATTACCACTCCCGACGGTC
AGCCCCTTTCCACCAAGAAAGGGAATATGGTCTACCTCGAATCACTGCTCGACGATGCTGTGGCCCGTGCCCGGGCACTA
GTGGATGCAAAAAGCCCAACCCTGTCACCGGAAGAACGGGCACAGATCGCTGAGGCAGTGGGTATTGGGGCAGTGATTTA
CAACGACCTCTACCAGGACCCTCGCCGCAACATTACGCTCGATTGGGATCGCATGCTATCGATTGAAGGGAATAGTGCCG
CGTATCTCCAGTATTCACACGCACGCTGCCGCTCGATTCTGCGCCGTGCCGCCGAAGAGGGTATGCTGAGCACTGAGGTC
GATCCAGGGCTGCTCACCCATCCGAGCGAGCAACGTCTGGTTCGCCATCTGGCGCGCCTGCCTGAAGCGGTACGCGAAGC
TGGTGCGCGCTACGCTCCCTTCGTGATTGCCGACTGGTGCTACACCACCGCTCGCGAGTTCGGTATCTTCTTCGAGCAGT
GCCCGGTGTTGCGGGCTGAAACTCCAGCCTTGCGGGCAGCGCGTCTGCAATTGGTGTCGGCAACCGCCAATGCACTACGG
AATGGACTGGCGTTACTGGGTATTCAGGCACCTGAACGGATGTAG

Upstream 100 bases:

>100_bases
CTCCCCATGTGGCTGCTGGAATCCATACTTCCTTACGACGCCTGTCCCCGACGATATGCGGTATACTAAGGCTTGACATA
GCAATACAAGGAGCACACGT

Downstream 100 bases:

>100_bases
GCAGGTTCTACGCTGGCGATCAGGTGTACGGGCAGGTGTTTGGAGAGTGCTCTTTGCTACGACATATCCAACCCTCGGGC
AGAGCTTGAGGTGCGTATGA

Product: arginyl-tRNA synthetase

Products: NA

Alternate protein names: Arginine--tRNA ligase; ArgRS

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAADLATAIVPPPDSLIGEVTAT
GAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVVIDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGD
NHLGDWGTQFGIILAAMQRYGRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT
MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFIVQRSDGGTVYITRDIATIKF
RLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVELIHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARAL
VDAKSPTLSPEERAQIAEAVGIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV
DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAETPALRAARLQLVSATANALR
NGLALLGIQAPERM

Sequences:

>Translated_574_residues
MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAADLATAIVPPPDSLIGEVTAT
GAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVVIDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGD
NHLGDWGTQFGIILAAMQRYGRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT
MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFIVQRSDGGTVYITRDIATIKF
RLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVELIHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARAL
VDAKSPTLSPEERAQIAEAVGIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV
DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAETPALRAARLQLVSATANALR
NGLALLGIQAPERM
>Mature_574_residues
MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAADLATAIVPPPDSLIGEVTAT
GAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVVIDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGD
NHLGDWGTQFGIILAAMQRYGRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT
MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFIVQRSDGGTVYITRDIATIKF
RLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVELIHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARAL
VDAKSPTLSPEERAQIAEAVGIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV
DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAETPALRAARLQLVSATANALR
NGLALLGIQAPERM

Specific function: Unknown

COG id: COG0018

COG function: function code J; Arginyl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family

Homologues:

Organism=Homo sapiens, GI197100773, Length=512, Percent_Identity=31.25, Blast_Score=267, Evalue=2e-71,
Organism=Homo sapiens, GI15149476, Length=543, Percent_Identity=30.3867403314917, Blast_Score=232, Evalue=6e-61,
Organism=Escherichia coli, GI1788184, Length=582, Percent_Identity=37.4570446735395, Blast_Score=357, Evalue=1e-99,
Organism=Caenorhabditis elegans, GI71985061, Length=479, Percent_Identity=30.4801670146138, Blast_Score=221, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI71985068, Length=448, Percent_Identity=30.5803571428571, Blast_Score=209, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17532153, Length=515, Percent_Identity=26.4077669902913, Blast_Score=150, Evalue=1e-36,
Organism=Saccharomyces cerevisiae, GI6320548, Length=540, Percent_Identity=33.7037037037037, Blast_Score=296, Evalue=6e-81,
Organism=Saccharomyces cerevisiae, GI6321883, Length=587, Percent_Identity=30.4940374787053, Blast_Score=280, Evalue=5e-76,
Organism=Drosophila melanogaster, GI18859963, Length=480, Percent_Identity=30.8333333333333, Blast_Score=239, Evalue=4e-63,
Organism=Drosophila melanogaster, GI28571570, Length=507, Percent_Identity=30.1775147928994, Blast_Score=210, Evalue=2e-54,

Paralogues:

None

Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SYR_CHLAA (A9WEH7)

Other databases:

- EMBL:   CP000909
- RefSeq:   YP_001635628.1
- ProteinModelPortal:   A9WEH7
- SMR:   A9WEH7
- GeneID:   5826478
- GenomeReviews:   CP000909_GR
- KEGG:   cau:Caur_2024
- HOGENOM:   HBG695395
- OMA:   YNDDLQP
- ProtClustDB:   PRK01611
- GO:   GO:0005737
- HAMAP:   MF_00123
- InterPro:   IPR001412
- InterPro:   IPR001278
- InterPro:   IPR015945
- InterPro:   IPR005148
- InterPro:   IPR008909
- InterPro:   IPR014729
- InterPro:   IPR009080
- Gene3D:   G3DSA:3.30.1360.70
- Gene3D:   G3DSA:3.40.50.620
- PANTHER:   PTHR11956
- PRINTS:   PR01038
- SMART:   SM00836
- TIGRFAMs:   TIGR00456

Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d; SSF55190 Arg-tRNA-synth_Ic_N; SSF47323 tRNAsyn_1a_bind

EC number: =6.1.1.19

Molecular weight: Translated: 63529; Mature: 63529

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAA
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEEHHHHCCCCHHHHHH
DLATAIVPPPDSLIGEVTATGAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVV
HHHHHCCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
IDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFGIILAAMQRY
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHC
GRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHHHHHH
MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFI
HHHHHCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHH
VQRSDGGTVYITRDIATIKFRLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVEL
EEECCCCEEEEEECEEEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHCHHEEEEE
IHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARALVDAKSPTLSPEERAQIAEAV
EEECCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV
HHHHHHHHHHHCCCCCCEEEEHHHEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCC
DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAE
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC
TPALRAARLQLVSATANALRNGLALLGIQAPERM
CCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
>Mature Secondary Structure
MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAA
CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEEHHHHCCCCHHHHHH
DLATAIVPPPDSLIGEVTATGAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVV
HHHHHCCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
IDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFGIILAAMQRY
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHC
GRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHHHHHH
MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFI
HHHHHCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHH
VQRSDGGTVYITRDIATIKFRLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVEL
EEECCCCEEEEEECEEEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHCHHEEEEE
IHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARALVDAKSPTLSPEERAQIAEAV
EEECCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV
HHHHHHHHHHHCCCCCCEEEEHHHEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCC
DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAE
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC
TPALRAARLQLVSATANALRNGLALLGIQAPERM
CCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA