Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is argS
Identifier: 222525439
GI number: 222525439
Start: 2767115
End: 2768839
Strand: Direct
Name: argS
Synonym: Chy400_2184
Alternate gene names: 222525439
Gene position: 2767115-2768839 (Clockwise)
Preceding gene: 222525438
Following gene: 222525440
Centisome position: 52.52
GC content: 57.04
Gene sequence:
>1725_bases ATGCGCTACGCGCTCGAACGATTTATTAGCGATATTCAAGCGGCTATTGTCGCCACCGGCAAAGTACCGGCTGATCTGAT TGAAATTACGACACCAAAACCAAACATTCCCGCTGATCGCACATTTGTGACCTTCAAAGCGGCAAAGGCACTCGGCGTCG ATCCGGTGCGTCTGGCTGCCGATCTGGCAACGGCTATTGTTCCGCCACCCGATTCGCTGATTGGCGAGGTGACGGCTACC GGTGCTTTTCTGAATTTTACGCTCCACCCACAGCGATTGGCCGCAGCCGTGATGGCAGAGATTGAGACATACGGCGATGC CTACGGCTCTGTGGCCGATGGTGCTAACCGGACGGTGGTTATCGACTATTCATCACCCAACATCGCCAAGCGCATGCACG TCGGTCATATCCGCTCAACGATTATCGGGCAGGCGTTAGTGCATATTTTCCGCGCCCTCGGTTATCGCGTGATCGGTGAT AATCACCTGGGTGATTGGGGGACGCAGTTTGGTATTATCCTGGCCGCCATGCAGCGCTATGGTCGCCCGCAGAACGAAGG TGAAGCGGCGATGGCCGAACTGGAGGCGCTGTACGCTCGCTACAACGCCGAGATGAAAGATAATCCGCCCCTTGAAGACG AAGCCCGGCGCTGGTCGCTGGCTCTGGAGCAGGGCGATCCAACTGCCCGTGAGCTGTGGCAGTGGTGCGTTGATCTGACG ATGCGGGCAGCCCAGCGCAACTATGACCGGCTGGGTGTCCGTTTCGATTACGCCTATGGCGAGAGTTTCTACGAAGCGAT GCTGCCTGGGGTGATCGAAGAAGCGCTTCAATCGGGCGCAGCGTTTCGTGATGTTGATGGGGCGGTTGTCGCCGAACTTG ATAAGCTGCCCCGGTTTATTGTGCAGCGGAGCGATGGTGGTACTGTCTACATCACCCGTGATATTGCGACGATTAAATTT CGTTTGCAAGAGTTCAATCCCTCTCACATCATTTATGTGGTCGACGCCCGCCAGGAACTGCATTTTCGACAGCTCTTCGC GATTGTGCGGGCAATGGGTTATGCCCTCGATGTTGAATTGATCCATGTCCCATTTGGCGTTATTACCACTCCCGACGGTC AGCCCCTTTCCACCAAGAAAGGGAATATGGTCTACCTCGAATCACTGCTCGACGATGCTGTGGCCCGTGCCCGGGCACTA GTGGATGCAAAAAGCCCAACCCTGTCACCGGAAGAACGGGCACAGATCGCTGAGGCAGTGGGTATTGGGGCAGTGATTTA CAACGACCTCTACCAGGACCCTCGCCGCAACATTACGCTCGATTGGGATCGCATGCTATCGATTGAAGGGAATAGTGCCG CGTATCTCCAGTATTCACACGCACGCTGCCGCTCGATTCTGCGCCGTGCCGCCGAAGAGGGTATGCTGAGCACTGAGGTC GATCCAGGGCTGCTCACCCATCCGAGCGAGCAACGTCTGGTTCGCCATCTGGCGCGCCTGCCTGAAGCGGTACGCGAAGC TGGTGCGCGCTACGCTCCCTTCGTGATTGCCGACTGGTGCTACACCACCGCTCGCGAGTTCGGTATCTTCTTCGAGCAGT GCCCGGTGTTGCGGGCTGAAACTCCAGCCTTGCGGGCAGCGCGTCTGCAATTGGTGTCGGCAACCGCCAATGCACTACGG AATGGACTGGCGTTACTGGGTATTCAGGCACCTGAACGGATGTAG
Upstream 100 bases:
>100_bases CTCCCCATGTGGCTGCTGGAATCCATACTTCCTTACGACGCCTGTCCCCGACGATATGCGGTATACTAAGGCTTGACATA GCAATACAAGGAGCACACGT
Downstream 100 bases:
>100_bases GCAGGTTCTACGCTGGCGATCAGGTGTACGGGCAGGTGTTTGGAGAGTGCTCTTTGCTACGACATATCCAACCCTCGGGC AGAGCTTGAGGTGCGTATGA
Product: arginyl-tRNA synthetase
Products: NA
Alternate protein names: Arginine--tRNA ligase; ArgRS
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAADLATAIVPPPDSLIGEVTAT GAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVVIDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGD NHLGDWGTQFGIILAAMQRYGRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFIVQRSDGGTVYITRDIATIKF RLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVELIHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARAL VDAKSPTLSPEERAQIAEAVGIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAETPALRAARLQLVSATANALR NGLALLGIQAPERM
Sequences:
>Translated_574_residues MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAADLATAIVPPPDSLIGEVTAT GAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVVIDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGD NHLGDWGTQFGIILAAMQRYGRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFIVQRSDGGTVYITRDIATIKF RLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVELIHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARAL VDAKSPTLSPEERAQIAEAVGIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAETPALRAARLQLVSATANALR NGLALLGIQAPERM >Mature_574_residues MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAADLATAIVPPPDSLIGEVTAT GAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVVIDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGD NHLGDWGTQFGIILAAMQRYGRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFIVQRSDGGTVYITRDIATIKF RLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVELIHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARAL VDAKSPTLSPEERAQIAEAVGIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAETPALRAARLQLVSATANALR NGLALLGIQAPERM
Specific function: Unknown
COG id: COG0018
COG function: function code J; Arginyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI197100773, Length=512, Percent_Identity=31.25, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI15149476, Length=543, Percent_Identity=30.3867403314917, Blast_Score=232, Evalue=6e-61, Organism=Escherichia coli, GI1788184, Length=582, Percent_Identity=37.4570446735395, Blast_Score=357, Evalue=1e-99, Organism=Caenorhabditis elegans, GI71985061, Length=479, Percent_Identity=30.4801670146138, Blast_Score=221, Evalue=1e-57, Organism=Caenorhabditis elegans, GI71985068, Length=448, Percent_Identity=30.5803571428571, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17532153, Length=515, Percent_Identity=26.4077669902913, Blast_Score=150, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6320548, Length=540, Percent_Identity=33.7037037037037, Blast_Score=296, Evalue=6e-81, Organism=Saccharomyces cerevisiae, GI6321883, Length=587, Percent_Identity=30.4940374787053, Blast_Score=280, Evalue=5e-76, Organism=Drosophila melanogaster, GI18859963, Length=480, Percent_Identity=30.8333333333333, Blast_Score=239, Evalue=4e-63, Organism=Drosophila melanogaster, GI28571570, Length=507, Percent_Identity=30.1775147928994, Blast_Score=210, Evalue=2e-54,
Paralogues:
None
Copy number: 789 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYR_CHLAA (A9WEH7)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001635628.1 - ProteinModelPortal: A9WEH7 - SMR: A9WEH7 - GeneID: 5826478 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_2024 - HOGENOM: HBG695395 - OMA: YNDDLQP - ProtClustDB: PRK01611 - GO: GO:0005737 - HAMAP: MF_00123 - InterPro: IPR001412 - InterPro: IPR001278 - InterPro: IPR015945 - InterPro: IPR005148 - InterPro: IPR008909 - InterPro: IPR014729 - InterPro: IPR009080 - Gene3D: G3DSA:3.30.1360.70 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11956 - PRINTS: PR01038 - SMART: SM00836 - TIGRFAMs: TIGR00456
Pfam domain/function: PF03485 Arg_tRNA_synt_N; PF05746 DALR_1; PF00750 tRNA-synt_1d; SSF55190 Arg-tRNA-synth_Ic_N; SSF47323 tRNAsyn_1a_bind
EC number: =6.1.1.19
Molecular weight: Translated: 63529; Mature: 63529
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAA CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEEHHHHCCCCHHHHHH DLATAIVPPPDSLIGEVTATGAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVV HHHHHCCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE IDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFGIILAAMQRY EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHC GRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHHHHHH MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFI HHHHHCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHH VQRSDGGTVYITRDIATIKFRLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVEL EEECCCCEEEEEECEEEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHCHHEEEEE IHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARALVDAKSPTLSPEERAQIAEAV EEECCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH GIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV HHHHHHHHHHHCCCCCCEEEEHHHEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCC DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC TPALRAARLQLVSATANALRNGLALLGIQAPERM CCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC >Mature Secondary Structure MRYALERFISDIQAAIVATGKVPADLIEITTPKPNIPADRTFVTFKAAKALGVDPVRLAA CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEEHHHHCCCCHHHHHH DLATAIVPPPDSLIGEVTATGAFLNFTLHPQRLAAAVMAEIETYGDAYGSVADGANRTVV HHHHHCCCCCHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE IDYSSPNIAKRMHVGHIRSTIIGQALVHIFRALGYRVIGDNHLGDWGTQFGIILAAMQRY EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHC GRPQNEGEAAMAELEALYARYNAEMKDNPPLEDEARRWSLALEQGDPTARELWQWCVDLT CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHEEEEECCCCHHHHHHHHHHHHH MRAAQRNYDRLGVRFDYAYGESFYEAMLPGVIEEALQSGAAFRDVDGAVVAELDKLPRFI HHHHHCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHH VQRSDGGTVYITRDIATIKFRLQEFNPSHIIYVVDARQELHFRQLFAIVRAMGYALDVEL EEECCCCEEEEEECEEEEEEEEEECCCCEEEEEEECHHHHHHHHHHHHHHHHCHHEEEEE IHVPFGVITTPDGQPLSTKKGNMVYLESLLDDAVARARALVDAKSPTLSPEERAQIAEAV EEECCCEEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH GIGAVIYNDLYQDPRRNITLDWDRMLSIEGNSAAYLQYSHARCRSILRRAAEEGMLSTEV HHHHHHHHHHHCCCCCCEEEEHHHEEEECCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCC DPGLLTHPSEQRLVRHLARLPEAVREAGARYAPFVIADWCYTTAREFGIFFEQCPVLRAE CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC TPALRAARLQLVSATANALRNGLALLGIQAPERM CCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA