Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525440
Identifier: 222525440
GI number: 222525440
Start: 2768936
End: 2770642
Strand: Direct
Name: 222525440
Synonym: Chy400_2185
Alternate gene names: NA
Gene position: 2768936-2770642 (Clockwise)
Preceding gene: 222525439
Following gene: 222525441
Centisome position: 52.55
GC content: 51.73
Gene sequence:
>1707_bases ATGACAGCAACTAATTTCAGCACAGAAAATCGAACCTACCGCCAGCTCTTGGGGAACGGGCTTACCTACCGTATACCGCC GTTCCAGCGCGACTATTCCTGGGGTGAGGAAGAGTGGGAAGATCTGTGGCTCGATATTCAGAGCACCCTCCCTGCCGATG GTGAACCTGCCCACTACATGGGCTATCTGGTACTCCAGACAGTTGACAATCGGGTGTTTGAGGTTATCGATGGTCAGCAG CGCCTCACCACCTTGAGTCTGATCGTTCTGGCGGCAATGCGCTTGCTCAAGCGTCTCATCAGCAGCGGTGTTGAGGCCGA GGCCAATCAGATTCGTCTGACGCAGTTACGGGCCAGTTATATCGGTTACCTCAATCCGGTAACACTTATGACGCAGAACA AGCTCTCACTCAACCGGCAGAACGATCCGTATTATCGAGATTATCTGGTTACGCTGACCGATCCGCTTCCGCAGCGTGGG TTTCCGGCTTCCACGTTGACGATGCGGAAAGCTTTTGAATGGTTTGAACGTCGTCTCAATGAATATACCAGAACCGATAG CGATCAAGGCCGTGCTTTGGCGCAGTTTATTGAGACGATGAGTGATAAGCTCTTCTTCACTGTCATCACGGTAGCCGATG AACTCAATGCGTACCGTGTTTTTGAGACCCTCAATGCCCGTGGTGTTCGTTTATCGGCGACCGATCTGCTCAAAAATTAT CTCTTTTCCGTCCTGGCTCGCGGTCAACAGGCGACAGGTGAATTAGAAGAGTTGGAGCGCCGTTGGGAAAGACTGGTTGG TCGGTTAGGTAGTGAGAGCTTTCCAGATTTTCTTCGGATGCATTGGAACAGTCGGTATAGCTTTGCGCGCCAGTCTGAGC TGTTCAAGACGATCCGCAGCCGCATCCAGAGTCGTGAAGCGGTATTTACGCTGTTGCGCGAGATGGACGAGGATGTCGAT ACCTACCTTGCTCTCACCCAACCCGAGGGTTCAGATTGGCCTTCCGATTGGAAGATCTCGGCTCGCGAGCTTCGTCTTTT TTCGGTACGCCAGCCCTATCCGATGCTGATGGCGGCCAGACGCCGGTTTGCTGAACAGGATTTTGCCAGGTTGCTGCGAG CAACGGTCGTTATCTCGTTTCGTTACAATGTCATTGGTTCACGGCATCCAGGTGAACAGGAGCGACTATATCACGAAGTG GCGAAAAAGATTCACGAGGGAACGATAACGAATGTTCACCTTGCGTTGCAAGCCTTATATCCTATCTATCGTAGTGATGC TGCATTCCGGGCAGATTTTGCCGAGAAATCGATTAAAACCACCCAGAGTCGTAATGCGCGGATCGTGCGATATATCCTGA GCAAGCTCGAGCGGCAGGTTGGTGGGATCGAGTTTGATCAAGACTCCCCTGCGTATACCATTGAACATATTTTGCCGCAG TCACCCGATGCGGGATGGGATGCTTTTAGTGACCGCGATATAGACTCCTTCATCTATCGTTTGGGCAATATGACGATGCT TGAGAGTAGTCGCAATAAAGACGCCGCTAATAAACCATTTGCGCAGAAGCGAGCTATTTACAAGGATAGTCAGTTTCACC TCACGAAAAAACTGGCCGACGAAGAAGAGTGGACGCCAGAGCGCCTGGCTGCACGACAGCATGAGATGGCCAGGCTTGCC TCAGCAATCTGGCGCATCGATCTGTAG
Upstream 100 bases:
>100_bases GTAGGCAGGTTCTACGCTGGCGATCAGGTGTACGGGCAGGTGTTTGGAGAGTGCTCTTTGCTACGACATATCCAACCCTC GGGCAGAGCTTGAGGTGCGT
Downstream 100 bases:
>100_bases ATGTTGTTTCACAAATCCATCCTTCTACAGCATCTCTCCCCTGCGCGTCTGGTTGTGCAAAATCCGGGTTGCCGCCTCTG CTCCTCACGCATCATCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MTATNFSTENRTYRQLLGNGLTYRIPPFQRDYSWGEEEWEDLWLDIQSTLPADGEPAHYMGYLVLQTVDNRVFEVIDGQQ RLTTLSLIVLAAMRLLKRLISSGVEAEANQIRLTQLRASYIGYLNPVTLMTQNKLSLNRQNDPYYRDYLVTLTDPLPQRG FPASTLTMRKAFEWFERRLNEYTRTDSDQGRALAQFIETMSDKLFFTVITVADELNAYRVFETLNARGVRLSATDLLKNY LFSVLARGQQATGELEELERRWERLVGRLGSESFPDFLRMHWNSRYSFARQSELFKTIRSRIQSREAVFTLLREMDEDVD TYLALTQPEGSDWPSDWKISARELRLFSVRQPYPMLMAARRRFAEQDFARLLRATVVISFRYNVIGSRHPGEQERLYHEV AKKIHEGTITNVHLALQALYPIYRSDAAFRADFAEKSIKTTQSRNARIVRYILSKLERQVGGIEFDQDSPAYTIEHILPQ SPDAGWDAFSDRDIDSFIYRLGNMTMLESSRNKDAANKPFAQKRAIYKDSQFHLTKKLADEEEWTPERLAARQHEMARLA SAIWRIDL
Sequences:
>Translated_568_residues MTATNFSTENRTYRQLLGNGLTYRIPPFQRDYSWGEEEWEDLWLDIQSTLPADGEPAHYMGYLVLQTVDNRVFEVIDGQQ RLTTLSLIVLAAMRLLKRLISSGVEAEANQIRLTQLRASYIGYLNPVTLMTQNKLSLNRQNDPYYRDYLVTLTDPLPQRG FPASTLTMRKAFEWFERRLNEYTRTDSDQGRALAQFIETMSDKLFFTVITVADELNAYRVFETLNARGVRLSATDLLKNY LFSVLARGQQATGELEELERRWERLVGRLGSESFPDFLRMHWNSRYSFARQSELFKTIRSRIQSREAVFTLLREMDEDVD TYLALTQPEGSDWPSDWKISARELRLFSVRQPYPMLMAARRRFAEQDFARLLRATVVISFRYNVIGSRHPGEQERLYHEV AKKIHEGTITNVHLALQALYPIYRSDAAFRADFAEKSIKTTQSRNARIVRYILSKLERQVGGIEFDQDSPAYTIEHILPQ SPDAGWDAFSDRDIDSFIYRLGNMTMLESSRNKDAANKPFAQKRAIYKDSQFHLTKKLADEEEWTPERLAARQHEMARLA SAIWRIDL >Mature_567_residues TATNFSTENRTYRQLLGNGLTYRIPPFQRDYSWGEEEWEDLWLDIQSTLPADGEPAHYMGYLVLQTVDNRVFEVIDGQQR LTTLSLIVLAAMRLLKRLISSGVEAEANQIRLTQLRASYIGYLNPVTLMTQNKLSLNRQNDPYYRDYLVTLTDPLPQRGF PASTLTMRKAFEWFERRLNEYTRTDSDQGRALAQFIETMSDKLFFTVITVADELNAYRVFETLNARGVRLSATDLLKNYL FSVLARGQQATGELEELERRWERLVGRLGSESFPDFLRMHWNSRYSFARQSELFKTIRSRIQSREAVFTLLREMDEDVDT YLALTQPEGSDWPSDWKISARELRLFSVRQPYPMLMAARRRFAEQDFARLLRATVVISFRYNVIGSRHPGEQERLYHEVA KKIHEGTITNVHLALQALYPIYRSDAAFRADFAEKSIKTTQSRNARIVRYILSKLERQVGGIEFDQDSPAYTIEHILPQS PDAGWDAFSDRDIDSFIYRLGNMTMLESSRNKDAANKPFAQKRAIYKDSQFHLTKKLADEEEWTPERLAARQHEMARLAS AIWRIDL
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66200; Mature: 66069
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATNFSTENRTYRQLLGNGLTYRIPPFQRDYSWGEEEWEDLWLDIQSTLPADGEPAHYM CCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH GYLVLQTVDNRVFEVIDGQQRLTTLSLIVLAAMRLLKRLISSGVEAEANQIRLTQLRASY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IGYLNPVTLMTQNKLSLNRQNDPYYRDYLVTLTDPLPQRGFPASTLTMRKAFEWFERRLN HCCCCCEEEEECCCCCCCCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH EYTRTDSDQGRALAQFIETMSDKLFFTVITVADELNAYRVFETLNARGVRLSATDLLKNY HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH LFSVLARGQQATGELEELERRWERLVGRLGSESFPDFLRMHWNSRYSFARQSELFKTIRS HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH RIQSREAVFTLLREMDEDVDTYLALTQPEGSDWPSDWKISARELRLFSVRQPYPMLMAAR HHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHH RRFAEQDFARLLRATVVISFRYNVIGSRHPGEQERLYHEVAKKIHEGTITNVHLALQALY HHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH PIYRSDAAFRADFAEKSIKTTQSRNARIVRYILSKLERQVGGIEFDQDSPAYTIEHILPQ HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCCEEHHHHCCC SPDAGWDAFSDRDIDSFIYRLGNMTMLESSRNKDAANKPFAQKRAIYKDSQFHLTKKLAD CCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCC EEEWTPERLAARQHEMARLASAIWRIDL CCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TATNFSTENRTYRQLLGNGLTYRIPPFQRDYSWGEEEWEDLWLDIQSTLPADGEPAHYM CCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHH GYLVLQTVDNRVFEVIDGQQRLTTLSLIVLAAMRLLKRLISSGVEAEANQIRLTQLRASY HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH IGYLNPVTLMTQNKLSLNRQNDPYYRDYLVTLTDPLPQRGFPASTLTMRKAFEWFERRLN HCCCCCEEEEECCCCCCCCCCCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH EYTRTDSDQGRALAQFIETMSDKLFFTVITVADELNAYRVFETLNARGVRLSATDLLKNY HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHH LFSVLARGQQATGELEELERRWERLVGRLGSESFPDFLRMHWNSRYSFARQSELFKTIRS HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH RIQSREAVFTLLREMDEDVDTYLALTQPEGSDWPSDWKISARELRLFSVRQPYPMLMAAR HHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHH RRFAEQDFARLLRATVVISFRYNVIGSRHPGEQERLYHEVAKKIHEGTITNVHLALQALY HHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH PIYRSDAAFRADFAEKSIKTTQSRNARIVRYILSKLERQVGGIEFDQDSPAYTIEHILPQ HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECCCCCCCEEHHHHCCC SPDAGWDAFSDRDIDSFIYRLGNMTMLESSRNKDAANKPFAQKRAIYKDSQFHLTKKLAD CCCCCCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCC EEEWTPERLAARQHEMARLASAIWRIDL CCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA