| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yyaL [H]
Identifier: 222524638
GI number: 222524638
Start: 1743111
End: 1745192
Strand: Direct
Name: yyaL [H]
Synonym: Chy400_1363
Alternate gene names: 222524638
Gene position: 1743111-1745192 (Clockwise)
Preceding gene: 222524637
Following gene: 222524639
Centisome position: 33.08
GC content: 61.58
Gene sequence:
>2082_bases ATGAACGCCGGGTCACGTCCATTGAACCGGCTGGCCCACGAAGCCAGTCCGTATCTCCAACAGCACGCCGATAATCCGGT TGATTGGTATCCGTGGGGCGAAGAGGCTCTCGAACGCGCCCGGCGTGAGGATAAGCCCATTCTGGTCAGTATCGGGTATG CCGCCTGTCACTGGTGCCACGTGATGGCCCACGAGAGTTTCGCCGACCCGGAAGTGGCGGCTGTGCAGAATGAATATTTC ATCAATATCAAGGTTGACCGCGAGGAGCGTCCCGATCTCGACAATATCTATATGGCGGCAGCACAAGCGCTGACCGGGCG CGGTGGCTGGCCGCTCAATGTGTTTTGTCTGCCTGATGGAACACCGTTCTTCGCCGGTACCTATTTTCCACCCGACGCCA AAGCCGCCCGCTACCGGATGCCCGGCTGGCGGCAGGTGCTGCTCTCGGTAGCCGAGGCGTATAAAACCCGGCGGGCGGAT GTGACCGCTTCCGCACACGAGCTGCTCGAACATATCAAGTTGCTCACCCGACCGTTGCCTGAAACCCTTCCCCTCGACGA AGAGTTGCTGATGGCGGCAGCAGCGCAGATCGGGCGTGAATTCGATCCGCAGTATGGCGGGTTTGGCGACGCGCCAAAGT TTCCGCAGCCGGTCGTGCTGGAGTTTCTGTTGCGCACCCATCTGCGCGGTGACGTACAGGCGCTGCCGATGCTTCAGCAG ACACTTGAGCAGATGGCGCGGGGTGGGATGTACGATCAGGTCGGCGGTGGCTTCCACCGCTACAGTGTCGATGAGCGCTG GCTGGTGCCCCATTTCGAGAAGATGCTCTACGATAATGCCCTGCTGGCTGAGGTCTACCATCTGGCGGCCCAGGTCACCG GTGATACCTTCCTCGCCCGTATTGCCGATGAGACGTTCACCTACATGCTACGCGATCTGCGCCATCCTGATGGGGCGTTC TTTAGCAGTGAGGATGCCGACAGTTTGCCGACACCCGGTGCATCCCACGCCGAAGAGGGGGCGTTCTACGTCTGGACGCC CGATGAATTGCGAGCAGCGCTGGGCGATGATGCGGTGCTGGTTGGCGCCTACTACGGGGTGACGCGCCAGGGCAATTTTG AAGGGCGTTCGATCCTGCACGTGCCACGACCGGCTGCCGCTGTTGCAGCGATGCTGGGCGTGTCGGTGGAGCGGCTTGAA GCGACCGTTGCCCGTGCCCGCCCAATCCTGCGCACCTTTCGCGAGCGACGACCCCGCCCGTTCCGTGATGAGAAGGTGAT TACGGCATGGAATGCGATGGCGATCCGTGCGCTGGCAGTGGCAAGTTCCCGTGTGCCGGCGTATCTGGATGCAGCGCGAC AGTGTGCCGATTTCCTGCTGACCAACCTTCGGCGTGATGATGGCCGGTTGCTGCGAAGCTGGAAGGACGGGCGGCCAGGA CCGGCGGCATTTCTCGATGATTATGCCCTGTTCTGCGATGCCCTGATCGAACTCCATGCTGCTGGCGGCGACACCCGCTA TCTGGCTACCGCCATCGATCTGGCCGATGCGATGATCGATCTGTTTTGGGATGATCAGGCCGGCATGTTCTTCGATACCG GTCGTGATCAACCCGCCCTGGTTACCCGTCCACGTGATTTGAGTGATAATGCAACACCGTCCGGCTCATCGGCGGCCACG GTTGCCCTGCTGCGGCTGTACGCCATCACCGGGCGCGAGAGGTATGAAACGCGGGCCATGCAGACGCTGCAACAGACAAC ACCGCTGCTCAAGCGCTTTCCGTTAGGATTTGGGCGTATGCTGTGTGCGGCTGATCTGGCGCTGGGGCCGCTGCGCGAGC TGGCGATTATCGGCCCGCCTGATCATCCGGTAACGCAGGCGATGCTGGCAGTGGCGCGATCTGCATATCGTCCTCGCCTG GTCATTGCGCGAGCCATGCCTGACGATCCGGTCGTCACGCTCAGCCCACTCCTGAACGACCGCCCGATGGTTGATGGGCA GCCGACCGCTTATCTCTGCGAGCAGTTTGCCTGTCAGATGCCGGTTACGACGCCAGAGGCACTTCAGGCGCAGTTGGGAT GA
Upstream 100 bases:
>100_bases AGCCTGTTTGAACAGGCATACCATGACGCCGCTTAACGTACTTGTTACCCATGGCTGAAGAAAGGCAGCCAACCAGATAT GTCTGGTGAAGAAGCGACAC
Downstream 100 bases:
>100_bases GTAGGAGATAGGAGATAGGAGATAGGGGATAGGGGATAGGAAACCTCGTGTGGCAATGTGAACGGGTACATGCATCGTCT GTAGGGGCGGGTTCAGAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MNAGSRPLNRLAHEASPYLQQHADNPVDWYPWGEEALERARREDKPILVSIGYAACHWCHVMAHESFADPEVAAVQNEYF INIKVDREERPDLDNIYMAAAQALTGRGGWPLNVFCLPDGTPFFAGTYFPPDAKAARYRMPGWRQVLLSVAEAYKTRRAD VTASAHELLEHIKLLTRPLPETLPLDEELLMAAAAQIGREFDPQYGGFGDAPKFPQPVVLEFLLRTHLRGDVQALPMLQQ TLEQMARGGMYDQVGGGFHRYSVDERWLVPHFEKMLYDNALLAEVYHLAAQVTGDTFLARIADETFTYMLRDLRHPDGAF FSSEDADSLPTPGASHAEEGAFYVWTPDELRAALGDDAVLVGAYYGVTRQGNFEGRSILHVPRPAAAVAAMLGVSVERLE ATVARARPILRTFRERRPRPFRDEKVITAWNAMAIRALAVASSRVPAYLDAARQCADFLLTNLRRDDGRLLRSWKDGRPG PAAFLDDYALFCDALIELHAAGGDTRYLATAIDLADAMIDLFWDDQAGMFFDTGRDQPALVTRPRDLSDNATPSGSSAAT VALLRLYAITGRERYETRAMQTLQQTTPLLKRFPLGFGRMLCAADLALGPLRELAIIGPPDHPVTQAMLAVARSAYRPRL VIARAMPDDPVVTLSPLLNDRPMVDGQPTAYLCEQFACQMPVTTPEALQAQLG
Sequences:
>Translated_693_residues MNAGSRPLNRLAHEASPYLQQHADNPVDWYPWGEEALERARREDKPILVSIGYAACHWCHVMAHESFADPEVAAVQNEYF INIKVDREERPDLDNIYMAAAQALTGRGGWPLNVFCLPDGTPFFAGTYFPPDAKAARYRMPGWRQVLLSVAEAYKTRRAD VTASAHELLEHIKLLTRPLPETLPLDEELLMAAAAQIGREFDPQYGGFGDAPKFPQPVVLEFLLRTHLRGDVQALPMLQQ TLEQMARGGMYDQVGGGFHRYSVDERWLVPHFEKMLYDNALLAEVYHLAAQVTGDTFLARIADETFTYMLRDLRHPDGAF FSSEDADSLPTPGASHAEEGAFYVWTPDELRAALGDDAVLVGAYYGVTRQGNFEGRSILHVPRPAAAVAAMLGVSVERLE ATVARARPILRTFRERRPRPFRDEKVITAWNAMAIRALAVASSRVPAYLDAARQCADFLLTNLRRDDGRLLRSWKDGRPG PAAFLDDYALFCDALIELHAAGGDTRYLATAIDLADAMIDLFWDDQAGMFFDTGRDQPALVTRPRDLSDNATPSGSSAAT VALLRLYAITGRERYETRAMQTLQQTTPLLKRFPLGFGRMLCAADLALGPLRELAIIGPPDHPVTQAMLAVARSAYRPRL VIARAMPDDPVVTLSPLLNDRPMVDGQPTAYLCEQFACQMPVTTPEALQAQLG >Mature_693_residues MNAGSRPLNRLAHEASPYLQQHADNPVDWYPWGEEALERARREDKPILVSIGYAACHWCHVMAHESFADPEVAAVQNEYF INIKVDREERPDLDNIYMAAAQALTGRGGWPLNVFCLPDGTPFFAGTYFPPDAKAARYRMPGWRQVLLSVAEAYKTRRAD VTASAHELLEHIKLLTRPLPETLPLDEELLMAAAAQIGREFDPQYGGFGDAPKFPQPVVLEFLLRTHLRGDVQALPMLQQ TLEQMARGGMYDQVGGGFHRYSVDERWLVPHFEKMLYDNALLAEVYHLAAQVTGDTFLARIADETFTYMLRDLRHPDGAF FSSEDADSLPTPGASHAEEGAFYVWTPDELRAALGDDAVLVGAYYGVTRQGNFEGRSILHVPRPAAAVAAMLGVSVERLE ATVARARPILRTFRERRPRPFRDEKVITAWNAMAIRALAVASSRVPAYLDAARQCADFLLTNLRRDDGRLLRSWKDGRPG PAAFLDDYALFCDALIELHAAGGDTRYLATAIDLADAMIDLFWDDQAGMFFDTGRDQPALVTRPRDLSDNATPSGSSAAT VALLRLYAITGRERYETRAMQTLQQTTPLLKRFPLGFGRMLCAADLALGPLRELAIIGPPDHPVTQAMLAVARSAYRPRL VIARAMPDDPVVTLSPLLNDRPMVDGQPTAYLCEQFACQMPVTTPEALQAQLG
Specific function: Unknown
COG id: COG1331
COG function: function code O; Highly conserved protein containing a thioredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.elegans B0495.5 [H]
Homologues:
Organism=Homo sapiens, GI31542723, Length=734, Percent_Identity=37.3297002724796, Blast_Score=456, Evalue=1e-128, Organism=Caenorhabditis elegans, GI25147430, Length=721, Percent_Identity=34.8127600554785, Blast_Score=432, Evalue=1e-121, Organism=Drosophila melanogaster, GI20129985, Length=734, Percent_Identity=36.9209809264305, Blast_Score=461, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 - InterPro: IPR004879 - InterPro: IPR005198 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]
EC number: NA
Molecular weight: Translated: 76949; Mature: 76949
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGSRPLNRLAHEASPYLQQHADNPVDWYPWGEEALERARREDKPILVSIGYAACHWCH CCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHH VMAHESFADPEVAAVQNEYFINIKVDREERPDLDNIYMAAAQALTGRGGWPLNVFCLPDG HHHHCCCCCCHHHEECCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCC TPFFAGTYFPPDAKAARYRMPGWRQVLLSVAEAYKTRRADVTASAHELLEHIKLLTRPLP CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC ETLPLDEELLMAAAAQIGREFDPQYGGFGDAPKFPQPVVLEFLLRTHLRGDVQALPMLQQ CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH TLEQMARGGMYDQVGGGFHRYSVDERWLVPHFEKMLYDNALLAEVYHLAAQVTGDTFLAR HHHHHHCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IADETFTYMLRDLRHPDGAFFSSEDADSLPTPGASHAEEGAFYVWTPDELRAALGDDAVL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCEEE VGAYYGVTRQGNFEGRSILHVPRPAAAVAAMLGVSVERLEATVARARPILRTFRERRPRP EEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC FRDEKVITAWNAMAIRALAVASSRVPAYLDAARQCADFLLTNLRRDDGRLLRSWKDGRPG CCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC PAAFLDDYALFCDALIELHAAGGDTRYLATAIDLADAMIDLFWDDQAGMFFDTGRDQPAL CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCE VTRPRDLSDNATPSGSSAATVALLRLYAITGRERYETRAMQTLQQTTPLLKRFPLGFGRM EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH LCAADLALGPLRELAIIGPPDHPVTQAMLAVARSAYRPRLVIARAMPDDPVVTLSPLLND HHHHHHHHCCHHHEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCC RPMVDGQPTAYLCEQFACQMPVTTPEALQAQLG CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure MNAGSRPLNRLAHEASPYLQQHADNPVDWYPWGEEALERARREDKPILVSIGYAACHWCH CCCCCHHHHHHHHHHCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHH VMAHESFADPEVAAVQNEYFINIKVDREERPDLDNIYMAAAQALTGRGGWPLNVFCLPDG HHHHCCCCCCHHHEECCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCC TPFFAGTYFPPDAKAARYRMPGWRQVLLSVAEAYKTRRADVTASAHELLEHIKLLTRPLP CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC ETLPLDEELLMAAAAQIGREFDPQYGGFGDAPKFPQPVVLEFLLRTHLRGDVQALPMLQQ CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH TLEQMARGGMYDQVGGGFHRYSVDERWLVPHFEKMLYDNALLAEVYHLAAQVTGDTFLAR HHHHHHCCCCCHHHCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH IADETFTYMLRDLRHPDGAFFSSEDADSLPTPGASHAEEGAFYVWTPDELRAALGDDAVL HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCEEE VGAYYGVTRQGNFEGRSILHVPRPAAAVAAMLGVSVERLEATVARARPILRTFRERRPRP EEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC FRDEKVITAWNAMAIRALAVASSRVPAYLDAARQCADFLLTNLRRDDGRLLRSWKDGRPG CCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCC PAAFLDDYALFCDALIELHAAGGDTRYLATAIDLADAMIDLFWDDQAGMFFDTGRDQPAL CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCE VTRPRDLSDNATPSGSSAATVALLRLYAITGRERYETRAMQTLQQTTPLLKRFPLGFGRM EECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH LCAADLALGPLRELAIIGPPDHPVTQAMLAVARSAYRPRLVIARAMPDDPVVTLSPLLND HHHHHHHHCCHHHEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCC RPMVDGQPTAYLCEQFACQMPVTTPEALQAQLG CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]