| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is bglIIM [H]
Identifier: 222524637
GI number: 222524637
Start: 1741454
End: 1742443
Strand: Direct
Name: bglIIM [H]
Synonym: Chy400_1361
Alternate gene names: 222524637
Gene position: 1741454-1742443 (Clockwise)
Preceding gene: 222524635
Following gene: 222524638
Centisome position: 33.05
GC content: 49.49
Gene sequence:
>990_bases ATGAGTGAATTACCATTGTTTCGTTCGGTAACGTCTATCGAAACTGCTTTCAGGCCAGATGCCGACGTGATCATCATGTC AGGCGATGTGAGTGAATGCATCGCGCAGATTCCCGATCGTTCAATCGCCCTGATCGTCACATCACCGCCGTACAATCTGG GAAAAGCCTATGAAGATCGAGTCTCGATTGAAGCATATTTGCAGACTCAGGCGGAACTTATTGCGCAGCTCTGTCGTGTG TTGCGCGACGATGGCAGTATTTGCTGGCAGGTAGGTAACTTCGTCGAGCATGGTGAAGTGTACCCACTTGATATTCTGTA CTACCCCATCTTCAAGAGACTGGGCCTGAGACTACGCAACCGGATTGTCTGGAAATTTGGGCATGGCTTGCACGCTTCAA AACGATTCTCCGGGCGCTATGAAACGATCCTCTGGTTTACCAAATCGGACCACTACATCTTCAATTTAGATGCAGTTCGT GTTCCGGCCAAATACCCCGGTAAACGACACTTTAAAGGTCCGAATAAGGGCAGGCCATCAGGTAATCCCCTGGGGAAGAA TCCGTCGGATGTTTGGGAAATCCTCGAACGGGATTGGGAAGAACTGGTATGGGACATCCCGAATGTCAAATCGAACCATC CAGAAAAGACCATACATCCCTGTCAGTTTCCGATTGAACTGGTTGAGCGTTGCGTGCTTGCCCTGACCAATGAAGGTGAT ATGGTCTTTGACCCGTATATGGGGGTCGGCTCGACCTTGATTGCTGCATTGATGCATCAGCGACGTGCCGTTGGTTGTGA TAAAGAAGCAACGTATGTCGAAATTGCTCGTCAACGTGTGGTTGATTATTTCAATGGTACCCTGCGTTACCGTCCGCTCG GCAAACCCGTTTACCAGCCAACAGGGAGAGAGAAAGTTTCTCAGATTCCAGAGGAGTGGAAGGAGTCGTTACAAGCCCGA CTTCTGGAGCGAAATGGAGATTACGAATGA
Upstream 100 bases:
>100_bases GTTCAATTATTGTGCTACAATATGCTATACCATACCCTTCTACCGCGAATCAGGTTACAATGAGAAAACGGTATGTACCG TGATTGATATAGGACAGGAT
Downstream 100 bases:
>100_bases GAGTCGTCGGCAAATATTCTTTCAACGACGGTGAACGGTTTATCGAGGAGAACTATCCGATTGAATTGCAAGAGGTCTAC AATGTTATAGAAAAAAGTAG
Product: DNA methylase N-4/N-6 domain-containing protein
Products: NA
Alternate protein names: M.BglII; N(4)- cytosine-specific methyltransferase BglII [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSELPLFRSVTSIETAFRPDADVIIMSGDVSECIAQIPDRSIALIVTSPPYNLGKAYEDRVSIEAYLQTQAELIAQLCRV LRDDGSICWQVGNFVEHGEVYPLDILYYPIFKRLGLRLRNRIVWKFGHGLHASKRFSGRYETILWFTKSDHYIFNLDAVR VPAKYPGKRHFKGPNKGRPSGNPLGKNPSDVWEILERDWEELVWDIPNVKSNHPEKTIHPCQFPIELVERCVLALTNEGD MVFDPYMGVGSTLIAALMHQRRAVGCDKEATYVEIARQRVVDYFNGTLRYRPLGKPVYQPTGREKVSQIPEEWKESLQAR LLERNGDYE
Sequences:
>Translated_329_residues MSELPLFRSVTSIETAFRPDADVIIMSGDVSECIAQIPDRSIALIVTSPPYNLGKAYEDRVSIEAYLQTQAELIAQLCRV LRDDGSICWQVGNFVEHGEVYPLDILYYPIFKRLGLRLRNRIVWKFGHGLHASKRFSGRYETILWFTKSDHYIFNLDAVR VPAKYPGKRHFKGPNKGRPSGNPLGKNPSDVWEILERDWEELVWDIPNVKSNHPEKTIHPCQFPIELVERCVLALTNEGD MVFDPYMGVGSTLIAALMHQRRAVGCDKEATYVEIARQRVVDYFNGTLRYRPLGKPVYQPTGREKVSQIPEEWKESLQAR LLERNGDYE >Mature_328_residues SELPLFRSVTSIETAFRPDADVIIMSGDVSECIAQIPDRSIALIVTSPPYNLGKAYEDRVSIEAYLQTQAELIAQLCRVL RDDGSICWQVGNFVEHGEVYPLDILYYPIFKRLGLRLRNRIVWKFGHGLHASKRFSGRYETILWFTKSDHYIFNLDAVRV PAKYPGKRHFKGPNKGRPSGNPLGKNPSDVWEILERDWEELVWDIPNVKSNHPEKTIHPCQFPIELVERCVLALTNEGDM VFDPYMGVGSTLIAALMHQRRAVGCDKEATYVEIARQRVVDYFNGTLRYRPLGKPVYQPTGREKVSQIPEEWKESLQARL LERNGDYE
Specific function: This methylase recognizes the double-stranded sequence AGATCT, causes specific methylation on C-5 on both strands, and protects the DNA from cleavage by the BglII endonuclease [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=271, Percent_Identity=30.2583025830258, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR017985 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.113 [H]
Molecular weight: Translated: 37799; Mature: 37667
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELPLFRSVTSIETAFRPDADVIIMSGDVSECIAQIPDRSIALIVTSPPYNLGKAYEDR CCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH VSIEAYLQTQAELIAQLCRVLRDDGSICWQVGNFVEHGEVYPLDILYYPIFKRLGLRLRN HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH RIVWKFGHGLHASKRFSGRYETILWFTKSDHYIFNLDAVRVPAKYPGKRHFKGPNKGRPS HEEEEECCCCCCHHHCCCCEEEEEEEECCCCEEEEECEEECCCCCCCCCCCCCCCCCCCC GNPLGKNPSDVWEILERDWEELVWDIPNVKSNHPEKTIHPCQFPIELVERCVLALTNEGD CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC MVFDPYMGVGSTLIAALMHQRRAVGCDKEATYVEIARQRVVDYFNGTLRYRPLGKPVYQP EEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC TGREKVSQIPEEWKESLQARLLERNGDYE CCHHHHHHCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SELPLFRSVTSIETAFRPDADVIIMSGDVSECIAQIPDRSIALIVTSPPYNLGKAYEDR CCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH VSIEAYLQTQAELIAQLCRVLRDDGSICWQVGNFVEHGEVYPLDILYYPIFKRLGLRLRN HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHH RIVWKFGHGLHASKRFSGRYETILWFTKSDHYIFNLDAVRVPAKYPGKRHFKGPNKGRPS HEEEEECCCCCCHHHCCCCEEEEEEEECCCCEEEEECEEECCCCCCCCCCCCCCCCCCCC GNPLGKNPSDVWEILERDWEELVWDIPNVKSNHPEKTIHPCQFPIELVERCVLALTNEGD CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC MVFDPYMGVGSTLIAALMHQRRAVGCDKEATYVEIARQRVVDYFNGTLRYRPLGKPVYQP EEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC TGREKVSQIPEEWKESLQARLLERNGDYE CCHHHHHHCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9073062 [H]