| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is mrp [H]
Identifier: 222524566
GI number: 222524566
Start: 1652395
End: 1653489
Strand: Direct
Name: mrp [H]
Synonym: Chy400_1290
Alternate gene names: 222524566
Gene position: 1652395-1653489 (Clockwise)
Preceding gene: 222524563
Following gene: 222524567
Centisome position: 31.36
GC content: 59.36
Gene sequence:
>1095_bases ATGGGTCGCTTAACAAATCATCAATCGGCGACGGTGAGCGAAGATCAGATTCTCGCTGCGCTGCGACAGGTGCAAGAGCC AGAGCTGGGTGGCGACCTGGTTTCTCGGCAGATGGTCAAGCACATTGCCATCTGTGACGGTATTGTCCGTTGTACGATTG AGTTGACAACCCCGGCGTGTCCGTTGAAAGATCAGATCCGCAGTGAGGCTGAGGCAGCAGTGCTGGCGGTGCCAGGGGTG AGAGAGGTTCACATCGAGTTTACCGCCAATGTCCGCCGCCCTGCCGGTATTCCCGAACAATCAGCCATTCCCGGCGTTGC CAATGTGATTGCGGTGGCTGCCGGTAAAGGCGGTGTCGGCAAGAGTACGGTAGCGGCCAACCTGGCGGTTGCCCTGGCCC AGATGGGGGCACAGGTCGGTCTGCTCGACGCTGATGTGTTTGGGCCGAGCCTGCCACTCATGCTGGGAGTGCGCGGGCAG CCGATGGCCGTTAGCGACGCTAATGGTCAGCCGATGATGTTGCCGCTGAGCAACCACGGTATCAAGGTGATGTCGGTCGG GTTTCTGATTGACGAGTCACAGCCGGTGATCTGGCGTGGGCCGATGGTCAGTCAGTTACTGCGGCAATTTCTCTATCAGG TTGCCTGGGCGCCACTCGACTATCTGATTATCGATATGCCGCCCGGTACCGGCGATGTTGCCCTTACCCTGGCCCAGAGC CTGCCTCTCACCGGTGCCCTTATCGTGACTACGCCGCAGCAGGTGGCAACCATCGACGTAATCAAGGCGATGGAGATGTT CCGCAAAGTGAACGTGCCGCTGTTAGGGATCGTCGAGAACATGGCCTACTTCATCGCCCCCGATACCGGTAAGCGCTACG ACATTTTCGGTAGCGGTGGCGCCGAACGCCTGGCACAACAGTTGGGTGTACCGGTCCTCGGCCAGATTCCCCTTGGCATG AGTGTGCGCGAGGGTGGTGACAATGGTCAGCCGGCTGTGATCAGTGATGCCCCTGATGCGTATGCCGATATTTTCCGCGA GCTGGCTCGCCAGGTCGCTGCTCGCATCTCGGTGTTGCAGTACGCAATGGTGTAG
Upstream 100 bases:
>100_bases GCCGACATCCCACACCGTCTATGACTTTAGTAACATCTTGCTTTCTTAATTCTCTGGTATAATGTAACAAGACGCGCATA ACTGAGGATGGAGTAGATAC
Downstream 100 bases:
>100_bases CCGATTCGGTACCGGTGGGCCAATTCAGCCCACCGGTACGTGTTTCACATCGGTTGTTCGTTCGCCGTCTGTTTGTCACA ATGAGGTGAGGCTATGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MGRLTNHQSATVSEDQILAALRQVQEPELGGDLVSRQMVKHIAICDGIVRCTIELTTPACPLKDQIRSEAEAAVLAVPGV REVHIEFTANVRRPAGIPEQSAIPGVANVIAVAAGKGGVGKSTVAANLAVALAQMGAQVGLLDADVFGPSLPLMLGVRGQ PMAVSDANGQPMMLPLSNHGIKVMSVGFLIDESQPVIWRGPMVSQLLRQFLYQVAWAPLDYLIIDMPPGTGDVALTLAQS LPLTGALIVTTPQQVATIDVIKAMEMFRKVNVPLLGIVENMAYFIAPDTGKRYDIFGSGGAERLAQQLGVPVLGQIPLGM SVREGGDNGQPAVISDAPDAYADIFRELARQVAARISVLQYAMV
Sequences:
>Translated_364_residues MGRLTNHQSATVSEDQILAALRQVQEPELGGDLVSRQMVKHIAICDGIVRCTIELTTPACPLKDQIRSEAEAAVLAVPGV REVHIEFTANVRRPAGIPEQSAIPGVANVIAVAAGKGGVGKSTVAANLAVALAQMGAQVGLLDADVFGPSLPLMLGVRGQ PMAVSDANGQPMMLPLSNHGIKVMSVGFLIDESQPVIWRGPMVSQLLRQFLYQVAWAPLDYLIIDMPPGTGDVALTLAQS LPLTGALIVTTPQQVATIDVIKAMEMFRKVNVPLLGIVENMAYFIAPDTGKRYDIFGSGGAERLAQQLGVPVLGQIPLGM SVREGGDNGQPAVISDAPDAYADIFRELARQVAARISVLQYAMV >Mature_363_residues GRLTNHQSATVSEDQILAALRQVQEPELGGDLVSRQMVKHIAICDGIVRCTIELTTPACPLKDQIRSEAEAAVLAVPGVR EVHIEFTANVRRPAGIPEQSAIPGVANVIAVAAGKGGVGKSTVAANLAVALAQMGAQVGLLDADVFGPSLPLMLGVRGQP MAVSDANGQPMMLPLSNHGIKVMSVGFLIDESQPVIWRGPMVSQLLRQFLYQVAWAPLDYLIIDMPPGTGDVALTLAQSL PLTGALIVTTPQQVATIDVIKAMEMFRKVNVPLLGIVENMAYFIAPDTGKRYDIFGSGGAERLAQQLGVPVLGQIPLGMS VREGGDNGQPAVISDAPDAYADIFRELARQVAARISVLQYAMV
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=263, Percent_Identity=50.9505703422053, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI118572611, Length=263, Percent_Identity=41.4448669201521, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI6912540, Length=238, Percent_Identity=43.6974789915966, Blast_Score=190, Evalue=2e-48, Organism=Escherichia coli, GI87082045, Length=357, Percent_Identity=42.5770308123249, Blast_Score=284, Evalue=7e-78, Organism=Caenorhabditis elegans, GI25143050, Length=271, Percent_Identity=38.7453874538745, Blast_Score=180, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6322188, Length=228, Percent_Identity=42.9824561403509, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6321347, Length=247, Percent_Identity=38.4615384615385, Blast_Score=169, Evalue=7e-43, Organism=Drosophila melanogaster, GI221511043, Length=258, Percent_Identity=41.4728682170543, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI24667611, Length=217, Percent_Identity=47.0046082949309, Blast_Score=188, Evalue=4e-48, Organism=Drosophila melanogaster, GI19921440, Length=236, Percent_Identity=36.0169491525424, Blast_Score=144, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 38480; Mature: 38349
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLTNHQSATVSEDQILAALRQVQEPELGGDLVSRQMVKHIAICDGIVRCTIELTTPAC CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCC PLKDQIRSEAEAAVLAVPGVREVHIEFTANVRRPAGIPEQSAIPGVANVIAVAAGKGGVG CHHHHHHHHHCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHEEECCCCCCC KSTVAANLAVALAQMGAQVGLLDADVFGPSLPLMLGVRGQPMAVSDANGQPMMLPLSNHG CHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCEEEECCCCCEEEECCCCCEEEEEECCCC IKVMSVGFLIDESQPVIWRGPMVSQLLRQFLYQVAWAPLDYLIIDMPPGTGDVALTLAQS EEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHEEEEHHC LPLTGALIVTTPQQVATIDVIKAMEMFRKVNVPLLGIVENMAYFIAPDTGKRYDIFGSGG CCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCCCEEEEECCCC AERLAQQLGVPVLGQIPLGMSVREGGDNGQPAVISDAPDAYADIFRELARQVAARISVLQ HHHHHHHCCCCEEECCCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH YAMV HHCC >Mature Secondary Structure GRLTNHQSATVSEDQILAALRQVQEPELGGDLVSRQMVKHIAICDGIVRCTIELTTPAC CCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCCC PLKDQIRSEAEAAVLAVPGVREVHIEFTANVRRPAGIPEQSAIPGVANVIAVAAGKGGVG CHHHHHHHHHCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHEEECCCCCCC KSTVAANLAVALAQMGAQVGLLDADVFGPSLPLMLGVRGQPMAVSDANGQPMMLPLSNHG CHHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCEEEECCCCCEEEECCCCCEEEEEECCCC IKVMSVGFLIDESQPVIWRGPMVSQLLRQFLYQVAWAPLDYLIIDMPPGTGDVALTLAQS EEEEEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHEEEEHHC LPLTGALIVTTPQQVATIDVIKAMEMFRKVNVPLLGIVENMAYFIAPDTGKRYDIFGSGG CCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCEEEEECCCCCEEEEECCCC AERLAQQLGVPVLGQIPLGMSVREGGDNGQPAVISDAPDAYADIFRELARQVAARISVLQ HHHHHHHCCCCEEECCCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHH YAMV HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]