| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524262
Identifier: 222524262
GI number: 222524262
Start: 1259093
End: 1259845
Strand: Reverse
Name: 222524262
Synonym: Chy400_0985
Alternate gene names: NA
Gene position: 1259845-1259093 (Counterclockwise)
Preceding gene: 222524263
Following gene: 222524260
Centisome position: 23.91
GC content: 59.36
Gene sequence:
>753_bases ATGCCTCATCTACTCACAACACCTGCGGCACCGGCGTTGCTGGCAGCGTTTTGTGGCACCTTGCTGGCCGCACTTGGGGT AGCACTTCGTCAGCAACCGCTGGTGACGAGACCGTTGAATGAACGACAACGTCTGATCATTGGTCAGAGTAGTGGACTGC TGATCGCTCTCCTCTGTTTTGGTGCTGCTCTCAGCGGGGGGATTATCTGGGTGGGATTAGGGTTGGCGGCCTATCTGGCG CTTGGTCTGAAGTGGGCACGCCAGCCCCAGCGCGATCAGCAGCGGCTGAGCCAGGAATTACGACGCCTCACGCCGGGGTT GATCGGTTTTATTCGGGTTGCGTTGGGCAGCTTTGAAGCCCCCAGTCTGCTGTTGCGACGCTACTGCGCGCAGGCAACAC CCCGCCAGGCGCCAATGCGGAGCCTCGTCGCCGAGGCGTTGGCGCTCAGCGAAGAGCAGCGGATGCGCCCCTTTGCGGCA CTGGCCGAAGTTGCCCGTCGCTCCAATTGTCGTGAACTGATCGATGCTACGGCAGCGCTCGCTCAGGCAGAAGCTGAAGG GACACCGGTTGAGATGGTGCTCGCTGCGCAGCAGCAGACTCTGGAAGCGTTGTTACAGGGTGAATTTCGCCGGTTGATTC GCCGGCGCACAGTTTATCTGCTGTTGTTGACTGCGATCAGTCTGGTCGTGGGGATTTTGTTAAACCTGCTCTTCGTGATG GTGGTGGGTAGTGAGGTGTTTGCGGTGTTTTAG
Upstream 100 bases:
>100_bases TGGCTTTGCTGGCACCGATGATCGGTGGCTTCCTGTTCTCACAGGTCGAGGATGTTGATTATTAGGTATCGAGGTACTCA TCGTTACTCAGGAGCTGCAT
Downstream 100 bases:
>100_bases GAGATAGGAGAGAGGAGATAGGAAATAGGAAATAGGAGAGAGGAGATAGGAAATAGCTGGGGTAGGGGCGGTGATTCCAG GCTTTAGAAGATAGGAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MPHLLTTPAAPALLAAFCGTLLAALGVALRQQPLVTRPLNERQRLIIGQSSGLLIALLCFGAALSGGIIWVGLGLAAYLA LGLKWARQPQRDQQRLSQELRRLTPGLIGFIRVALGSFEAPSLLLRRYCAQATPRQAPMRSLVAEALALSEEQRMRPFAA LAEVARRSNCRELIDATAALAQAEAEGTPVEMVLAAQQQTLEALLQGEFRRLIRRRTVYLLLLTAISLVVGILLNLLFVM VVGSEVFAVF
Sequences:
>Translated_250_residues MPHLLTTPAAPALLAAFCGTLLAALGVALRQQPLVTRPLNERQRLIIGQSSGLLIALLCFGAALSGGIIWVGLGLAAYLA LGLKWARQPQRDQQRLSQELRRLTPGLIGFIRVALGSFEAPSLLLRRYCAQATPRQAPMRSLVAEALALSEEQRMRPFAA LAEVARRSNCRELIDATAALAQAEAEGTPVEMVLAAQQQTLEALLQGEFRRLIRRRTVYLLLLTAISLVVGILLNLLFVM VVGSEVFAVF >Mature_249_residues PHLLTTPAAPALLAAFCGTLLAALGVALRQQPLVTRPLNERQRLIIGQSSGLLIALLCFGAALSGGIIWVGLGLAAYLAL GLKWARQPQRDQQRLSQELRRLTPGLIGFIRVALGSFEAPSLLLRRYCAQATPRQAPMRSLVAEALALSEEQRMRPFAAL AEVARRSNCRELIDATAALAQAEAEGTPVEMVLAAQQQTLEALLQGEFRRLIRRRTVYLLLLTAISLVVGILLNLLFVMV VGSEVFAVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27128; Mature: 26996
Theoretical pI: Translated: 11.00; Mature: 11.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHLLTTPAAPALLAAFCGTLLAALGVALRQQPLVTRPLNERQRLIIGQSSGLLIALLCF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCCCHHHHHHHH GAALSGGIIWVGLGLAAYLALGLKWARQPQRDQQRLSQELRRLTPGLIGFIRVALGSFEA HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSLLLRRYCAQATPRQAPMRSLVAEALALSEEQRMRPFAALAEVARRSNCRELIDATAAL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAEAEGTPVEMVLAAQQQTLEALLQGEFRRLIRRRTVYLLLLTAISLVVGILLNLLFVM HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGSEVFAVF HHHHHHHHCC >Mature Secondary Structure PHLLTTPAAPALLAAFCGTLLAALGVALRQQPLVTRPLNERQRLIIGQSSGLLIALLCF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEECCCCCHHHHHHHH GAALSGGIIWVGLGLAAYLALGLKWARQPQRDQQRLSQELRRLTPGLIGFIRVALGSFEA HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSLLLRRYCAQATPRQAPMRSLVAEALALSEEQRMRPFAALAEVARRSNCRELIDATAAL HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQAEAEGTPVEMVLAAQQQTLEALLQGEFRRLIRRRTVYLLLLTAISLVVGILLNLLFVM HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVGSEVFAVF HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA