| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is narQ [C]
Identifier: 222524256
GI number: 222524256
Start: 1252523
End: 1254316
Strand: Reverse
Name: narQ [C]
Synonym: Chy400_0979
Alternate gene names: 222524256
Gene position: 1254316-1252523 (Counterclockwise)
Preceding gene: 222524257
Following gene: 222524255
Centisome position: 23.81
GC content: 53.34
Gene sequence:
>1794_bases ATGACCAGTCCGGCAAAATCATCAACCGCTGCTTCTTCGTCATCGCAACGATCACTGTCTGCCTGGAGTCCGCTGGGTGG TGAGCGTTTCTATGCTGCTGCCCGCTGGGTGTTGATCATATTGCTCGGTGTCGTAACCCAATTTTTGACCAATGGCGGTT TGTGGCCTGTTACCGATGAGATTGGCCCGTTAGAGGGCATTTTCTGGCTGTACGTCGGCTTCGCGCTGGTTTTCACCGTT CTGGCCTTTTTACAGTTTGCCGCCGGTCTGGTGAGTATTTCATACCTGTTTGATATCGCATTCATTTCGCTAATGACCTT TTTCGGTGGCGAGCGGATCGTCATCTTTTTCCCCTTGTACCTGGTACCGCTTACCTATGCTGCGATCCGTCAGTCGCGCT CGGTGAGCCTCCTTTCTGGCTTATTAGCTGCGGTGGCATACATGGCTGCCTTCATCGCATGGCGGCGGCTGATCGCGCCT GAAGCGTTGATGACGTTACTCGACTACGTGGCATTGGCTTTGCGTGGAACGACGCTGGCGATTGTGCCGTGGGTGACCGG CAATCTGGCGGAGCGGCAGAGCGAGTTCAATCGGGAACGGGTGACTCAGGCTCAACGCGATGCTGAGCAGGCGCTCAGCG AAGCCCGTGCCTATCGCGATCAGATGCGTTCGTTGTACCGGGTAGCGTTGACGCTGGGCAGTACTGCCAATTATCGACAG GTGTTAGATACGCTGCTGCAAGAGAGTCAGAAAATTGTGCCGTACCGGGCCGGGATCGTTCTGCTCTCTTCGGGCCAACC GAATGAATTGTATGTCGCTTTTGGTTCAAATCTGGCCCCAGGCGATTTGAATCGGTCGTTAAAAATGGATACCGGCCTGG CTGCGGCCCTCCGTGCCAATACCGCTCAAGTTATTACATCGTTTACACAATTTCCCTCGTTGCAACAACTTGGATCGCTG CGCACCTGTAAAGCGGCTGCCTTGCTGCCGTTGCAGGCTGGTATGCGGGTGTATGGATTGTTTGTCGTTGCGACTGATCA GACGCTCACTACCGACCAGGTTGAGATGTTGATGGCGCTGGCCAATTATGCGATTGTGGCCTTGCATAACGCACAGCTCA TCTATGATCTGAAAGAAGAACGCGAAAAGTTGCTCTCGCATGAAGAAGAGGTTCGCCATCAATTGGCCCGTGATCTGCAC GATGGCCCGGCCCAGGCTATGGCAGTGATTACGATGAAAGCTGAGTTTATCAAGCGGCTGCTTGAACGCGACCCGGCGCA GGCGCTGGCTGAACTCGATGAGCTGAGCAGTATTGCCAAGCGTACCAATTACGAGGTGCGCACGATGCTGTTTGAATTGC GTCCGTTGATGCTGGAAACGCAGGGCTTGAAAGTTACCCTCGAACAGTACCTCGACCGCCTGCGGGCCAAAGCCGGCAAT ACGGCAATTGTGCTTGAAGGAACCGATATTGATAAAGTTCGCCTCGGTTCAAAAGTTGAAGGTGCGCTCTTTAATATGAT CCAGGAATCGGTAACCAATGCCATCAAACATGCGAAAGCAAACCACATTTGGGTTCGCTTACGACGCTTGAACGATCAAA TGCTTGAAGTGGTGATTCAAGATGATGGGGTTGGTTTTGACAAGGCGGCGGTACTTAAATCGTATGAACGGCGCGGTAGC TTTGGCCTGCTGAATATCGATGAGCGTGCCCGTCTGGTGGGTGGCCGGGCTGAGATTGATTCGACCCCTGGCAAAGGCAC ACAGATTACCATTTTTGTTCCGATTGAGTCGTGA
Upstream 100 bases:
>100_bases GCGGTACGTGCCACCCTCGACACGCTGAAGTCTCTCTAAAAATACCAGAGCGACGGGCGTCGTAGGGGCGCCGTCGCTCT GTTCACTACGGGTAACGAGT
Downstream 100 bases:
>100_bases ATCCATATCTGAATCCACAACGCATTCGTGCTGCCCTGCGGGCGCTCAATCTGCGCCCGACCCGTGGCATGGGGCAGAAC TTTCTCCTCGATGGTCAGGT
Product: multi-sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MTSPAKSSTAASSSSQRSLSAWSPLGGERFYAAARWVLIILLGVVTQFLTNGGLWPVTDEIGPLEGIFWLYVGFALVFTV LAFLQFAAGLVSISYLFDIAFISLMTFFGGERIVIFFPLYLVPLTYAAIRQSRSVSLLSGLLAAVAYMAAFIAWRRLIAP EALMTLLDYVALALRGTTLAIVPWVTGNLAERQSEFNRERVTQAQRDAEQALSEARAYRDQMRSLYRVALTLGSTANYRQ VLDTLLQESQKIVPYRAGIVLLSSGQPNELYVAFGSNLAPGDLNRSLKMDTGLAAALRANTAQVITSFTQFPSLQQLGSL RTCKAAALLPLQAGMRVYGLFVVATDQTLTTDQVEMLMALANYAIVALHNAQLIYDLKEEREKLLSHEEEVRHQLARDLH DGPAQAMAVITMKAEFIKRLLERDPAQALAELDELSSIAKRTNYEVRTMLFELRPLMLETQGLKVTLEQYLDRLRAKAGN TAIVLEGTDIDKVRLGSKVEGALFNMIQESVTNAIKHAKANHIWVRLRRLNDQMLEVVIQDDGVGFDKAAVLKSYERRGS FGLLNIDERARLVGGRAEIDSTPGKGTQITIFVPIES
Sequences:
>Translated_597_residues MTSPAKSSTAASSSSQRSLSAWSPLGGERFYAAARWVLIILLGVVTQFLTNGGLWPVTDEIGPLEGIFWLYVGFALVFTV LAFLQFAAGLVSISYLFDIAFISLMTFFGGERIVIFFPLYLVPLTYAAIRQSRSVSLLSGLLAAVAYMAAFIAWRRLIAP EALMTLLDYVALALRGTTLAIVPWVTGNLAERQSEFNRERVTQAQRDAEQALSEARAYRDQMRSLYRVALTLGSTANYRQ VLDTLLQESQKIVPYRAGIVLLSSGQPNELYVAFGSNLAPGDLNRSLKMDTGLAAALRANTAQVITSFTQFPSLQQLGSL RTCKAAALLPLQAGMRVYGLFVVATDQTLTTDQVEMLMALANYAIVALHNAQLIYDLKEEREKLLSHEEEVRHQLARDLH DGPAQAMAVITMKAEFIKRLLERDPAQALAELDELSSIAKRTNYEVRTMLFELRPLMLETQGLKVTLEQYLDRLRAKAGN TAIVLEGTDIDKVRLGSKVEGALFNMIQESVTNAIKHAKANHIWVRLRRLNDQMLEVVIQDDGVGFDKAAVLKSYERRGS FGLLNIDERARLVGGRAEIDSTPGKGTQITIFVPIES >Mature_596_residues TSPAKSSTAASSSSQRSLSAWSPLGGERFYAAARWVLIILLGVVTQFLTNGGLWPVTDEIGPLEGIFWLYVGFALVFTVL AFLQFAAGLVSISYLFDIAFISLMTFFGGERIVIFFPLYLVPLTYAAIRQSRSVSLLSGLLAAVAYMAAFIAWRRLIAPE ALMTLLDYVALALRGTTLAIVPWVTGNLAERQSEFNRERVTQAQRDAEQALSEARAYRDQMRSLYRVALTLGSTANYRQV LDTLLQESQKIVPYRAGIVLLSSGQPNELYVAFGSNLAPGDLNRSLKMDTGLAAALRANTAQVITSFTQFPSLQQLGSLR TCKAAALLPLQAGMRVYGLFVVATDQTLTTDQVEMLMALANYAIVALHNAQLIYDLKEEREKLLSHEEEVRHQLARDLHD GPAQAMAVITMKAEFIKRLLERDPAQALAELDELSSIAKRTNYEVRTMLFELRPLMLETQGLKVTLEQYLDRLRAKAGNT AIVLEGTDIDKVRLGSKVEGALFNMIQESVTNAIKHAKANHIWVRLRRLNDQMLEVVIQDDGVGFDKAAVLKSYERRGSF GLLNIDERARLVGGRAEIDSTPGKGTQITIFVPIES
Specific function: Acts As A Sensor For Nitrate/Nitrite And Transduces Signal Of Nitrate/Nitrite Availability To The Narl/Narp Proteins. Narq Probably Activates Narl And Narp By Phosphorylation. Narq Probably Negatively Regulates The Narl Protein By Dephosphorylation. [C]
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain
Homologues:
Organism=Escherichia coli, GI1788812, Length=202, Percent_Identity=28.7128712871287, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1787474, Length=260, Percent_Identity=24.6153846153846, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI87082311, Length=216, Percent_Identity=27.3148148148148, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y899_CHLAA (Q45827)
Other databases:
- EMBL: CP000909 - EMBL: X89038 - RefSeq: YP_001634521.1 - ProteinModelPortal: Q45827 - GeneID: 5827959 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_0899 - HOGENOM: HBG404566 - ProtClustDB: CLSK972852 - InterPro: IPR003594 - InterPro: IPR003018 - InterPro: IPR011712 - InterPro: IPR005467 - Gene3D: G3DSA:3.30.565.10 - SMART: SM00065 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3; SSF55874 ATP_bd_ATPase
EC number: 2.7.3.- [C]
Molecular weight: Translated: 66022; Mature: 65891
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1efc5a90)-; HASH(0x1d8e0778)-; HASH(0x1feb91a4)-; HASH(0x1fc1c04c)-; HASH(0x1d9600f8)-;
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPAKSSTAASSSSQRSLSAWSPLGGERFYAAARWVLIILLGVVTQFLTNGGLWPVTDE CCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC IGPLEGIFWLYVGFALVFTVLAFLQFAAGLVSISYLFDIAFISLMTFFGGERIVIFFPLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHH LVPLTYAAIRQSRSVSLLSGLLAAVAYMAAFIAWRRLIAPEALMTLLDYVALALRGTTLA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEE IVPWVTGNLAERQSEFNRERVTQAQRDAEQALSEARAYRDQMRSLYRVALTLGSTANYRQ EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VLDTLLQESQKIVPYRAGIVLLSSGQPNELYVAFGSNLAPGDLNRSLKMDTGLAAALRAN HHHHHHHCCCCCCCEECCEEEEECCCCCEEEEEECCCCCCCCCCCCEECCCCHHHHHHCC TAQVITSFTQFPSLQQLGSLRTCKAAALLPLQAGMRVYGLFVVATDQTLTTDQVEMLMAL HHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHH ANYAIVALHNAQLIYDLKEEREKLLSHEEEVRHQLARDLHDGPAQAMAVITMKAEFIKRL HHHHHEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LERDPAQALAELDELSSIAKRTNYEVRTMLFELRPLMLETQGLKVTLEQYLDRLRAKAGN HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCC TAIVLEGTDIDKVRLGSKVEGALFNMIQESVTNAIKHAKANHIWVRLRRLNDQMLEVVIQ EEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEC DDGVGFDKAAVLKSYERRGSFGLLNIDERARLVGGRAEIDSTPGKGTQITIFVPIES CCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCCCCCCCCCCEEEEEEEECH >Mature Secondary Structure TSPAKSSTAASSSSQRSLSAWSPLGGERFYAAARWVLIILLGVVTQFLTNGGLWPVTDE CCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC IGPLEGIFWLYVGFALVFTVLAFLQFAAGLVSISYLFDIAFISLMTFFGGERIVIFFPLY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHH LVPLTYAAIRQSRSVSLLSGLLAAVAYMAAFIAWRRLIAPEALMTLLDYVALALRGTTLA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCEEE IVPWVTGNLAERQSEFNRERVTQAQRDAEQALSEARAYRDQMRSLYRVALTLGSTANYRQ EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH VLDTLLQESQKIVPYRAGIVLLSSGQPNELYVAFGSNLAPGDLNRSLKMDTGLAAALRAN HHHHHHHCCCCCCCEECCEEEEECCCCCEEEEEECCCCCCCCCCCCEECCCCHHHHHHCC TAQVITSFTQFPSLQQLGSLRTCKAAALLPLQAGMRVYGLFVVATDQTLTTDQVEMLMAL HHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCHHHHHHHHHH ANYAIVALHNAQLIYDLKEEREKLLSHEEEVRHQLARDLHDGPAQAMAVITMKAEFIKRL HHHHHEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LERDPAQALAELDELSSIAKRTNYEVRTMLFELRPLMLETQGLKVTLEQYLDRLRAKAGN HCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCC TAIVLEGTDIDKVRLGSKVEGALFNMIQESVTNAIKHAKANHIWVRLRRLNDQMLEVVIQ EEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEC DDGVGFDKAAVLKSYERRGSFGLLNIDERARLVGGRAEIDSTPGKGTQITIFVPIES CCCCCCHHHHHHHHHHHCCCCCEEECCHHHHHHCCCCCCCCCCCCCCEEEEEEEECH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with a nitrogenous group as acceptor [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8661927