Click here to switch to the map view.

The map label for this gene is 222524161

Identifier: 222524161

GI number: 222524161

Start: 1107749

End: 1108027

Strand: Reverse

Name: 222524161

Synonym: Chy400_0877

Alternate gene names: NA

Gene position: 1108027-1107749 (Counterclockwise)

Preceding gene: 222524162

Following gene: 222524160

Centisome position: 21.03

GC content: 55.2

Gene sequence:

>279_bases
ATGCACTCGGACTTAATCGGTAAGATCGAAAAGGCCCGGCGTTATGCCGCCGAACCAGAGCGAATCAAGTTCAGTGACCT
GCGGGCAACATTTCACGGTGGCAACAGCGATCACGAAATCTCGCTTCACGATGGGCAATGGTCGTGCAATTGCTCGTTCT
TCCGCATGTGGGGCACCTGTGCTCACGTCATGGCAATGCAGCGTATTCTCCATCCGATGCTAACCGAAGAAGCCCGGCAA
GCCGATCTGGCGATTGCGCAGCCAGATCTGAATGCCTGA

Upstream 100 bases:

>100_bases
CATGTGTGACAACGTGGTTGAGGGGTGTATAGGGCGGTACAGGCCGATGCCTGTAGCCGCCCTTTATGTTTTCCGGGCAC
GAGACGAAGGAGGTCTCCCT

Downstream 100 bases:

>100_bases
TCATGGACGACGCATCTTCACAGTGAGATTGACGCCTAAAGGTGGCGCGGTGATACTGATAGCGGGGCGAGTGGCGCCCC
GCTATCGGCATTGTTACGAC

Product: zinc finger SWIM domain-containing protein

Products: NA

Alternate protein names: Zinc Finger SWIM Domain Protein; SWIM Zinc Finger Domain Protein

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MHSDLIGKIEKARRYAAEPERIKFSDLRATFHGGNSDHEISLHDGQWSCNCSFFRMWGTCAHVMAMQRILHPMLTEEARQ
ADLAIAQPDLNA

Sequences:

>Translated_92_residues
MHSDLIGKIEKARRYAAEPERIKFSDLRATFHGGNSDHEISLHDGQWSCNCSFFRMWGTCAHVMAMQRILHPMLTEEARQ
ADLAIAQPDLNA
>Mature_92_residues
MHSDLIGKIEKARRYAAEPERIKFSDLRATFHGGNSDHEISLHDGQWSCNCSFFRMWGTCAHVMAMQRILHPMLTEEARQ
ADLAIAQPDLNA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10483; Mature: 10483

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSDLIGKIEKARRYAAEPERIKFSDLRATFHGGNSDHEISLHDGQWSCNCSFFRMWGTC
CCCHHHHHHHHHHHHCCCCCCEEHHHHEEEECCCCCCCEEEEECCCEECCHHHHHHHHHH
AHVMAMQRILHPMLTEEARQADLAIAQPDLNA
HHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
>Mature Secondary Structure
MHSDLIGKIEKARRYAAEPERIKFSDLRATFHGGNSDHEISLHDGQWSCNCSFFRMWGTC
CCCHHHHHHHHHHHHCCCCCCEEHHHHEEEECCCCCCCEEEEECCCEECCHHHHHHHHHH
AHVMAMQRILHPMLTEEARQADLAIAQPDLNA
HHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA