| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524162
Identifier: 222524162
GI number: 222524162
Start: 1108297
End: 1109013
Strand: Reverse
Name: 222524162
Synonym: Chy400_0878
Alternate gene names: NA
Gene position: 1109013-1108297 (Counterclockwise)
Preceding gene: 222524163
Following gene: 222524161
Centisome position: 21.05
GC content: 60.53
Gene sequence:
>717_bases ATGAACTATCGTTTAAGCCGCCGTTCACTGCTGACATTAGGTGTTGTTGCTCTCAGTCAGACGGTTGTCCGTGCGCAAAC GCCGGAAACGCAACCGATTTATCTGCCAATGGTTATGCGTTCGCCACTGCCGGGCACGTTACTCGGCCCTCCCAGCGGTA CCGCAGAAGCGGCGATTGCCTGGCTGTCTCCACGCAGCACAGCCTACGTCCCCTACGATGTTGGTGTCATCGTCAATGGC TACGCCGAGATTGGTCAGGCGGCTGAAATTGACTGGTTTCTGGCCATTGCGCAATGCGCGCATGAAACCGGTCATCTAAC CTCGTGGTGGTGTCAACGACCACGCCGTAATCCCGCCGGCATTGGCGTGACCGGAGAAATCCGCGAAGCGCCGCCCGATC AGCCACCAGGCCCCGATTGGGCGTGGGACGAGAGTATTCAACGCTGGCGAGCCGGGTTGAGTTTCGCGTCGTGGGTCGGC GAGTCGATCCCGGCGCATTTGGGGCGGTTGCTGGCCTATGCCCTTCCGCCGGGTGCCGGTACACCCTATCAGCAGCAACT GATCGACTATGCCCTCTGGCGGCGTCCGCTCCCTGACCATCTACGCGGTGTGGCGGTAACGATCACCGATCTGAACGGAC GATGGGCAGTGCCGGGTACAGAATACGGTCAGCGCATCCTGGCTCTGGCCGAGCGGATGCGGAGTGAAGGTTATTGA
Upstream 100 bases:
>100_bases ATTTAATCGATCAGAATGGCCGGCTACGGATCGTTTATCAATATGGAACCGCTGCGAATGTGTATGTGCAAGACATTCGC GATCTGCTCAAAGAAGCTCA
Downstream 100 bases:
>100_bases ATCATAACTCGCCGTGTGTAGACAGATCGCCCCTTTAGCGCGTTAGAGCGCCGTACTACCCGATTTTAGCAAATGTTGAC GCATCCCTTGACGTGAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNYRLSRRSLLTLGVVALSQTVVRAQTPETQPIYLPMVMRSPLPGTLLGPPSGTAEAAIAWLSPRSTAYVPYDVGVIVNG YAEIGQAAEIDWFLAIAQCAHETGHLTSWWCQRPRRNPAGIGVTGEIREAPPDQPPGPDWAWDESIQRWRAGLSFASWVG ESIPAHLGRLLAYALPPGAGTPYQQQLIDYALWRRPLPDHLRGVAVTITDLNGRWAVPGTEYGQRILALAERMRSEGY
Sequences:
>Translated_238_residues MNYRLSRRSLLTLGVVALSQTVVRAQTPETQPIYLPMVMRSPLPGTLLGPPSGTAEAAIAWLSPRSTAYVPYDVGVIVNG YAEIGQAAEIDWFLAIAQCAHETGHLTSWWCQRPRRNPAGIGVTGEIREAPPDQPPGPDWAWDESIQRWRAGLSFASWVG ESIPAHLGRLLAYALPPGAGTPYQQQLIDYALWRRPLPDHLRGVAVTITDLNGRWAVPGTEYGQRILALAERMRSEGY >Mature_238_residues MNYRLSRRSLLTLGVVALSQTVVRAQTPETQPIYLPMVMRSPLPGTLLGPPSGTAEAAIAWLSPRSTAYVPYDVGVIVNG YAEIGQAAEIDWFLAIAQCAHETGHLTSWWCQRPRRNPAGIGVTGEIREAPPDQPPGPDWAWDESIQRWRAGLSFASWVG ESIPAHLGRLLAYALPPGAGTPYQQQLIDYALWRRPLPDHLRGVAVTITDLNGRWAVPGTEYGQRILALAERMRSEGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26204; Mature: 26204
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYRLSRRSLLTLGVVALSQTVVRAQTPETQPIYLPMVMRSPLPGTLLGPPSGTAEAAIA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCCEECCCCCCHHHEEE WLSPRSTAYVPYDVGVIVNGYAEIGQAAEIDWFLAIAQCAHETGHLTSWWCQRPRRNPAG EECCCCCEECEEECCEEEECHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC IGVTGEIREAPPDQPPGPDWAWDESIQRWRAGLSFASWVGESIPAHLGRLLAYALPPGAG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC TPYQQQLIDYALWRRPLPDHLRGVAVTITDLNGRWAVPGTEYGQRILALAERMRSEGY CCHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNYRLSRRSLLTLGVVALSQTVVRAQTPETQPIYLPMVMRSPLPGTLLGPPSGTAEAAIA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCCEECCCCCCHHHEEE WLSPRSTAYVPYDVGVIVNGYAEIGQAAEIDWFLAIAQCAHETGHLTSWWCQRPRRNPAG EECCCCCEECEEECCEEEECHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCC IGVTGEIREAPPDQPPGPDWAWDESIQRWRAGLSFASWVGESIPAHLGRLLAYALPPGAG CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC TPYQQQLIDYALWRRPLPDHLRGVAVTITDLNGRWAVPGTEYGQRILALAERMRSEGY CCHHHHHHHHHHHCCCCHHHHCCEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA