Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is yxlA [H]
Identifier: 222524143
GI number: 222524143
Start: 1085728
End: 1087029
Strand: Reverse
Name: yxlA [H]
Synonym: Chy400_0859
Alternate gene names: 222524143
Gene position: 1087029-1085728 (Counterclockwise)
Preceding gene: 222524144
Following gene: 222524142
Centisome position: 20.63
GC content: 57.6
Gene sequence:
>1302_bases TTGCAGGCTCCGCCCACGTGGGGGATCGATCCGGTTCCGGTTGAACATCGGCGGTTGCGCTGGTTCGACATCTTCGTCTT ATGGTCAAGTCTCGGCGTTGGCCTGTTGGTGTTAGAGGCGGGGGCGTTGTTAGTTCCTGGCTTAAGTCTGGCGCAGGCAT TGATCGCCATTCTCATCGGTACTGCCATCGGGTCGTTGTTGCTGGCGCTGGTTGGCGTATTGGGGAGCGTGTACGGCGTG CCGACAATGGTGCTCTTGCGTCCCGTGCTCGGTCGCCATGGGTCGTATCTGGCCTCAATCTTCAATATCGTGCAACTGAT CGGTTGGACGGCCTTCGAGCTGTGGGTGATCGGGTTAGCTGCCCATCACGTGGGGCAGGCGCTTTTTGGCGTGAGCAACT ATTACGCCTGGGTAGCGGTGTTCACGGTCTGGTGTGTCTTGCTGGCGTTGGGTGGGCCACTGGTAGTGGTGCGCGAGTGG CTAGAAAAGTTTGGGGTCTGGATCGTTTTTGGCGTGACCATCTGGATGACGATCTATCTGTTTACCCGCTACGATCTCAT CGCGCTCTTGAACCGTCCGGGAACAGGTGATCTGCCGTTCTGGTTGGGAGTCGATCTGGTAGCGGCCATGCCAATCTCCT GGATTCCGCTGGTGGCCGACTACAACCGCTTCGTGCGGCGTTCACGCGGCGGCTTCTGGGGAACGTATGCAGGTTTTGCG CTCACCAATGTCTGGTTTTACGCGCTTGGTGCTCTCTTCCTGCTGACGGCGAATGTGGCTCAACCCACACCGGAAAACCT CATCACAGCAATTATGGCGATGACGGGAGGGGTGGTGGCGCTGGCGGTGATTCTGGTCGATGAAACGGACAATGCTTTCG CCGACATCTACTCAACGGCGGTGTCGGTGCAGAATATCTTTCCGCAGCTCAATCAGCGCCTGGTGATTGTTCTGGTTGGA GTTGTCGGGTTTCTCCTCGCCACATTGCTGACGATGAGTGAGTATTTCACCTTTTTGCTGTTGATCGGGTCGCTCTTCGT GCCGCTTTTTGGGGTTGTGCTGGCCGATTATTTCGTGGTGCGGCGCCTGCTGGGGCTACACAGCGCTACATTGGTCGACC AACCTCCGGGCTGGCAGTGGAGCGGAATGGTTTCGTGGCTGGCCGGTGTGGTGATCTATCAGACCATCACCCAACTGGCT CCCCAGATCGGCGCCAGCATACCGGCGTTCCTCATCACGTTTGTGATGTACACGGCTTTACGGTTGGTACAACGGCAACG TCTGCTCCGTACCGCCAGTTAA
Upstream 100 bases:
>100_bases ACGGTGGTTTATGCATTAAACGCCACCCCTTCGCGGGTGGCGTTTATCGTTGGAGGTTGGTATGACGCTGAAGGCACGGC TGCGCACGTGGTTCCCCCGC
Downstream 100 bases:
>100_bases TGATGAATCACGAGAAAGGAGTGACCGGTGAAGACTCGACTGATTGCTCAGGCAGTGGTGCTCATTGCCCTCGGTGTGGC GCTGGCTCCATTTACCTCGT
Product: hydroxymethylpyrimidine transporter CytX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MQAPPTWGIDPVPVEHRRLRWFDIFVLWSSLGVGLLVLEAGALLVPGLSLAQALIAILIGTAIGSLLLALVGVLGSVYGV PTMVLLRPVLGRHGSYLASIFNIVQLIGWTAFELWVIGLAAHHVGQALFGVSNYYAWVAVFTVWCVLLALGGPLVVVREW LEKFGVWIVFGVTIWMTIYLFTRYDLIALLNRPGTGDLPFWLGVDLVAAMPISWIPLVADYNRFVRRSRGGFWGTYAGFA LTNVWFYALGALFLLTANVAQPTPENLITAIMAMTGGVVALAVILVDETDNAFADIYSTAVSVQNIFPQLNQRLVIVLVG VVGFLLATLLTMSEYFTFLLLIGSLFVPLFGVVLADYFVVRRLLGLHSATLVDQPPGWQWSGMVSWLAGVVIYQTITQLA PQIGASIPAFLITFVMYTALRLVQRQRLLRTAS
Sequences:
>Translated_433_residues MQAPPTWGIDPVPVEHRRLRWFDIFVLWSSLGVGLLVLEAGALLVPGLSLAQALIAILIGTAIGSLLLALVGVLGSVYGV PTMVLLRPVLGRHGSYLASIFNIVQLIGWTAFELWVIGLAAHHVGQALFGVSNYYAWVAVFTVWCVLLALGGPLVVVREW LEKFGVWIVFGVTIWMTIYLFTRYDLIALLNRPGTGDLPFWLGVDLVAAMPISWIPLVADYNRFVRRSRGGFWGTYAGFA LTNVWFYALGALFLLTANVAQPTPENLITAIMAMTGGVVALAVILVDETDNAFADIYSTAVSVQNIFPQLNQRLVIVLVG VVGFLLATLLTMSEYFTFLLLIGSLFVPLFGVVLADYFVVRRLLGLHSATLVDQPPGWQWSGMVSWLAGVVIYQTITQLA PQIGASIPAFLITFVMYTALRLVQRQRLLRTAS >Mature_433_residues MQAPPTWGIDPVPVEHRRLRWFDIFVLWSSLGVGLLVLEAGALLVPGLSLAQALIAILIGTAIGSLLLALVGVLGSVYGV PTMVLLRPVLGRHGSYLASIFNIVQLIGWTAFELWVIGLAAHHVGQALFGVSNYYAWVAVFTVWCVLLALGGPLVVVREW LEKFGVWIVFGVTIWMTIYLFTRYDLIALLNRPGTGDLPFWLGVDLVAAMPISWIPLVADYNRFVRRSRGGFWGTYAGFA LTNVWFYALGALFLLTANVAQPTPENLITAIMAMTGGVVALAVILVDETDNAFADIYSTAVSVQNIFPQLNQRLVIVLVG VVGFLLATLLTMSEYFTFLLLIGSLFVPLFGVVLADYFVVRRLLGLHSATLVDQPPGWQWSGMVSWLAGVVIYQTITQLA PQIGASIPAFLITFVMYTALRLVQRQRLLRTAS
Specific function: Unknown
COG id: COG1457
COG function: function code F; Purine-cytosine permease and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 47454; Mature: 47454
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAPPTWGIDPVPVEHRRLRWFDIFVLWSSLGVGLLVLEAGALLVPGLSLAQALIAILIG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCHHHCCCHHHHHHHHHHHHH TAIGSLLLALVGVLGSVYGVPTMVLLRPVLGRHGSYLASIFNIVQLIGWTAFELWVIGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AHHVGQALFGVSNYYAWVAVFTVWCVLLALGGPLVVVREWLEKFGVWIVFGVTIWMTIYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH FTRYDLIALLNRPGTGDLPFWLGVDLVAAMPISWIPLVADYNRFVRRSRGGFWGTYAGFA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH LTNVWFYALGALFLLTANVAQPTPENLITAIMAMTGGVVALAVILVDETDNAFADIYSTA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHEECCCCHHHHHHHHH VSVQNIFPQLNQRLVIVLVGVVGFLLATLLTMSEYFTFLLLIGSLFVPLFGVVLADYFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLLGLHSATLVDQPPGWQWSGMVSWLAGVVIYQTITQLAPQIGASIPAFLITFVMYTAL HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLVQRQRLLRTAS HHHHHHHHHHCCC >Mature Secondary Structure MQAPPTWGIDPVPVEHRRLRWFDIFVLWSSLGVGLLVLEAGALLVPGLSLAQALIAILIG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCCHHHCCCHHHHHHHHHHHHH TAIGSLLLALVGVLGSVYGVPTMVLLRPVLGRHGSYLASIFNIVQLIGWTAFELWVIGLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AHHVGQALFGVSNYYAWVAVFTVWCVLLALGGPLVVVREWLEKFGVWIVFGVTIWMTIYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH FTRYDLIALLNRPGTGDLPFWLGVDLVAAMPISWIPLVADYNRFVRRSRGGFWGTYAGFA HHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH LTNVWFYALGALFLLTANVAQPTPENLITAIMAMTGGVVALAVILVDETDNAFADIYSTA HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHEECCCCHHHHHHHHH VSVQNIFPQLNQRLVIVLVGVVGFLLATLLTMSEYFTFLLLIGSLFVPLFGVVLADYFVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLLGLHSATLVDQPPGWQWSGMVSWLAGVVIYQTITQLAPQIGASIPAFLITFVMYTAL HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLVQRQRLLRTAS HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969509; 9384377 [H]