Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222524144
Identifier: 222524144
GI number: 222524144
Start: 1087318
End: 1087905
Strand: Reverse
Name: 222524144
Synonym: Chy400_0860
Alternate gene names: NA
Gene position: 1087905-1087318 (Counterclockwise)
Preceding gene: 222524147
Following gene: 222524143
Centisome position: 20.65
GC content: 55.27
Gene sequence:
>588_bases ATGAGCGAAGCGATTCCCGGTTACACCTATGGTACAGCGCAGGTGGCACAATCGCCGGTGAGCCTGGAAGAATGGGAACT GCTGAAGCAGACAGTGCTGTGGACAGCCGAAGACGAGCAGTATCTGCGTATGGCCGGCGAGGTGCTCGGCGATCAGGTCG ATGCAATCCTTGATCTCTGGTACGGATTCGTCGCGTCGCACGCTCATCTGGTGTACTACTTCACCGGCTCTGACGGCCAG CCAATTGCCGATTACCTGAGTCGAGTACGCCAGCGCTTCGGTCAATGGATACTCGATACCTGTCGGCGACCCTACGACCA GGACTGGCTCAACTACCAGATGGAGATTGCCCTCCGCCATTACCGCACGAAGAAGAATCAGACTGATGGCGTACAATCCG TCCCGATGATTCCGTTGCGCTACATGATAGCCTTCATCTACCCGATCACCGCTACCATCAGAGAGTTTCTTGCCCGCAAA GGGCATTCAGCGGCGGAGGTGGATCGGATGCATCAGGCGTGGTTTAAGTCTATTGTGTTACAGGTGACGTTGTGGAGTTA TCCCTATACCAGGGAAGGCGATTTCTGA
Upstream 100 bases:
>100_bases ACTTATGCTTGAGATAAGAATAACGTATTTCACTTATTATCATAGCGCGCTTAGACTGAGCTTGCAACCAGAAAAGGGCT ACTCTTCCCGGAGGTGGGTT
Downstream 100 bases:
>100_bases CCGCTCCGCAAAATCGCCTTGACAGCTCTTCGGCCAACACTTTATAATGGCGGGCAACCACCGTCTGGTGGAAACAAGTT GATCACACAGCGTGTATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Permease Of Facilitator Superfamily
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSEAIPGYTYGTAQVAQSPVSLEEWELLKQTVLWTAEDEQYLRMAGEVLGDQVDAILDLWYGFVASHAHLVYYFTGSDGQ PIADYLSRVRQRFGQWILDTCRRPYDQDWLNYQMEIALRHYRTKKNQTDGVQSVPMIPLRYMIAFIYPITATIREFLARK GHSAAEVDRMHQAWFKSIVLQVTLWSYPYTREGDF
Sequences:
>Translated_195_residues MSEAIPGYTYGTAQVAQSPVSLEEWELLKQTVLWTAEDEQYLRMAGEVLGDQVDAILDLWYGFVASHAHLVYYFTGSDGQ PIADYLSRVRQRFGQWILDTCRRPYDQDWLNYQMEIALRHYRTKKNQTDGVQSVPMIPLRYMIAFIYPITATIREFLARK GHSAAEVDRMHQAWFKSIVLQVTLWSYPYTREGDF >Mature_194_residues SEAIPGYTYGTAQVAQSPVSLEEWELLKQTVLWTAEDEQYLRMAGEVLGDQVDAILDLWYGFVASHAHLVYYFTGSDGQP IADYLSRVRQRFGQWILDTCRRPYDQDWLNYQMEIALRHYRTKKNQTDGVQSVPMIPLRYMIAFIYPITATIREFLARKG HSAAEVDRMHQAWFKSIVLQVTLWSYPYTREGDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22790; Mature: 22659
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAIPGYTYGTAQVAQSPVSLEEWELLKQTVLWTAEDEQYLRMAGEVLGDQVDAILDLW CCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YGFVASHAHLVYYFTGSDGQPIADYLSRVRQRFGQWILDTCRRPYDQDWLNYQMEIALRH HHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YRTKKNQTDGVQSVPMIPLRYMIAFIYPITATIREFLARKGHSAAEVDRMHQAWFKSIVL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QVTLWSYPYTREGDF HHHHCCCCCCCCCCC >Mature Secondary Structure SEAIPGYTYGTAQVAQSPVSLEEWELLKQTVLWTAEDEQYLRMAGEVLGDQVDAILDLW CCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YGFVASHAHLVYYFTGSDGQPIADYLSRVRQRFGQWILDTCRRPYDQDWLNYQMEIALRH HHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH YRTKKNQTDGVQSVPMIPLRYMIAFIYPITATIREFLARKGHSAAEVDRMHQAWFKSIVL HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH QVTLWSYPYTREGDF HHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA