| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524006
Identifier: 222524006
GI number: 222524006
Start: 903691
End: 904503
Strand: Reverse
Name: 222524006
Synonym: Chy400_0721
Alternate gene names: NA
Gene position: 904503-903691 (Counterclockwise)
Preceding gene: 222524007
Following gene: 222524005
Centisome position: 17.17
GC content: 54.74
Gene sequence:
>813_bases ATGGCATTGGTGGGGAACATCCGAGATTTTAGCTTGTCAGACTTTCTCTCACTCGTTGATCGCGGGTATAAAACGGGTGC GCTGCATCTGTCGTATAATGATCAAACGGCGCGTCTGTACTTCGAGAAGGGAAAATTATTGCTGGCGGCACGCCGTCCTG AAGATGAAAAACCGGATCTCCTGGTGCGGCTTGGGGTGCTGAATGCCGAACAAGTTGCTCAGGCATGTCAGACACTTGCA GCACGAGGCAATGGGACGACCCTCAGCCAGGTGATCATTGATACTGGTCTGGCAAGCCCTGATCGATTACAGCAAGCCTT GCTGGGGCACACCGAACAGTCAGTCTATGGGCTGTTTGCCTGGCCTGAAGGCGATTTTCTTTTCGAGCATAATCAGCGAC CGGCGCCCGATGCACCCTTGGCGCCGACGCCGATCTCTATCGACCACCTGATTATGGAAGGGGTGCGACGGATCGATGAA TGGGAACGCATCCGTGATCGCATTCCGTCGACCGATCTGGTGCCACGGTTTTTGGCCCCACCAGGCGAAAAGCTCAAGGG GATGCGCCTGGCACCTGATGAATGGAAGGTCTTCGCTCGCATTAATGGCCGTGATACACTGGCCGAAATTGCCCAGAAGA CCGGATTGAGTGATTTCGATGTGTGTCGTGCGGTTTATGGGTTTCTGACCGCCGGAATGCTGGAGCTAGTGAAGCGACAG CGCGTGCTGGCTGCTGGAATGCCTCCGGTAGAACAGCCGCGTTTGAAGAAGAGCCTTGTTAATCGGATCATCAATCGGAT CCGCAGCATGTAG
Upstream 100 bases:
>100_bases GCGCAACCGGTTCAGGTAACTGCGAATGTGACCGGTCTGGTCGATACACAACCGACAATGTGAGGTCATTCACCCATAAC CCGCGATAGCGGAGGAATGT
Downstream 100 bases:
>100_bases CTGGGGCCAGAGCATCGGAGCGGAGGGCTGTGTGCAGACGGTAAAGATGGTGATCAGCGGCGCCGTGAACGCCGGCAAAA CCGAGTTTATCAAGACGATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MALVGNIRDFSLSDFLSLVDRGYKTGALHLSYNDQTARLYFEKGKLLLAARRPEDEKPDLLVRLGVLNAEQVAQACQTLA ARGNGTTLSQVIIDTGLASPDRLQQALLGHTEQSVYGLFAWPEGDFLFEHNQRPAPDAPLAPTPISIDHLIMEGVRRIDE WERIRDRIPSTDLVPRFLAPPGEKLKGMRLAPDEWKVFARINGRDTLAEIAQKTGLSDFDVCRAVYGFLTAGMLELVKRQ RVLAAGMPPVEQPRLKKSLVNRIINRIRSM
Sequences:
>Translated_270_residues MALVGNIRDFSLSDFLSLVDRGYKTGALHLSYNDQTARLYFEKGKLLLAARRPEDEKPDLLVRLGVLNAEQVAQACQTLA ARGNGTTLSQVIIDTGLASPDRLQQALLGHTEQSVYGLFAWPEGDFLFEHNQRPAPDAPLAPTPISIDHLIMEGVRRIDE WERIRDRIPSTDLVPRFLAPPGEKLKGMRLAPDEWKVFARINGRDTLAEIAQKTGLSDFDVCRAVYGFLTAGMLELVKRQ RVLAAGMPPVEQPRLKKSLVNRIINRIRSM >Mature_269_residues ALVGNIRDFSLSDFLSLVDRGYKTGALHLSYNDQTARLYFEKGKLLLAARRPEDEKPDLLVRLGVLNAEQVAQACQTLAA RGNGTTLSQVIIDTGLASPDRLQQALLGHTEQSVYGLFAWPEGDFLFEHNQRPAPDAPLAPTPISIDHLIMEGVRRIDEW ERIRDRIPSTDLVPRFLAPPGEKLKGMRLAPDEWKVFARINGRDTLAEIAQKTGLSDFDVCRAVYGFLTAGMLELVKRQR VLAAGMPPVEQPRLKKSLVNRIINRIRSM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30194; Mature: 30063
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVGNIRDFSLSDFLSLVDRGYKTGALHLSYNDQTARLYFEKGKLLLAARRPEDEKPDL CCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCE LVRLGVLNAEQVAQACQTLAARGNGTTLSQVIIDTGLASPDRLQQALLGHTEQSVYGLFA EEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEEEE WPEGDFLFEHNQRPAPDAPLAPTPISIDHLIMEGVRRIDEWERIRDRIPSTDLVPRFLAP CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC PGEKLKGMRLAPDEWKVFARINGRDTLAEIAQKTGLSDFDVCRAVYGFLTAGMLELVKRQ CCHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH RVLAAGMPPVEQPRLKKSLVNRIINRIRSM HHHHCCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALVGNIRDFSLSDFLSLVDRGYKTGALHLSYNDQTARLYFEKGKLLLAARRPEDEKPDL CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCEEEEECCCCCCCCCE LVRLGVLNAEQVAQACQTLAARGNGTTLSQVIIDTGLASPDRLQQALLGHTEQSVYGLFA EEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHEEEEEE WPEGDFLFEHNQRPAPDAPLAPTPISIDHLIMEGVRRIDEWERIRDRIPSTDLVPRFLAP CCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC PGEKLKGMRLAPDEWKVFARINGRDTLAEIAQKTGLSDFDVCRAVYGFLTAGMLELVKRQ CCHHHCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH RVLAAGMPPVEQPRLKKSLVNRIINRIRSM HHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA