| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222524005
Identifier: 222524005
GI number: 222524005
Start: 903129
End: 903659
Strand: Reverse
Name: 222524005
Synonym: Chy400_0720
Alternate gene names: NA
Gene position: 903659-903129 (Counterclockwise)
Preceding gene: 222524006
Following gene: 222524004
Centisome position: 17.15
GC content: 55.18
Gene sequence:
>531_bases GTGCAGACGGTAAAGATGGTGATCAGCGGCGCCGTGAACGCCGGCAAAACCGAGTTTATCAAGACGATCTCGGAAATTGA GGTCGTTTCGACGGAGCGCCGGGCGACCGACGATACTCGGCTGATCAAGAAGGAAACGACTGTCGCGATGGATTTTGGAC GCATCGCGATCTCTGATGATCTCGTGCTCCATCTCTTCGGAACACCGGGACAGAAGCGCTTCGATTTTATGTGGGAGATC CTCGCCGAAGGCATGCTCGGGCTGGTGATCCTCGTCGATAGCACACGACCCGAAACGTTCCGAGAGACGAACCGGATCAT CGACTTCTTCGTCTCGTATCGCGATACACCGTATGTGATTGCGGCAAACAAGCAGGATCGGCCTAATGCCTGGTCGCCGG AAGAATTGCGACTGGCTCTGCGTCAACCACCGCATATCAAGGTGTTACCGTGTACGGCAACGGATCGCGAGAGCGTGAAG AATGTGTTGCTCGAACTGCTCTACGTGATCCAGGAGCGCAGTGAAGACTAA
Upstream 100 bases:
>100_bases CCGGTAGAACAGCCGCGTTTGAAGAAGAGCCTTGTTAATCGGATCATCAATCGGATCCGCAGCATGTAGCTGGGGCCAGA GCATCGGAGCGGAGGGCTGT
Downstream 100 bases:
>100_bases GTTCGCCTCGTTTTCGGTGGCTTTGTAATGCGTAAAACTCGTTTTGCGCATTGCAAAGCCATAAAATATTGTTGGAAAAT CTCAGATGCTGTTTATCGCA
Product: small GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MQTVKMVISGAVNAGKTEFIKTISEIEVVSTERRATDDTRLIKKETTVAMDFGRIAISDDLVLHLFGTPGQKRFDFMWEI LAEGMLGLVILVDSTRPETFRETNRIIDFFVSYRDTPYVIAANKQDRPNAWSPEELRLALRQPPHIKVLPCTATDRESVK NVLLELLYVIQERSED
Sequences:
>Translated_176_residues MQTVKMVISGAVNAGKTEFIKTISEIEVVSTERRATDDTRLIKKETTVAMDFGRIAISDDLVLHLFGTPGQKRFDFMWEI LAEGMLGLVILVDSTRPETFRETNRIIDFFVSYRDTPYVIAANKQDRPNAWSPEELRLALRQPPHIKVLPCTATDRESVK NVLLELLYVIQERSED >Mature_176_residues MQTVKMVISGAVNAGKTEFIKTISEIEVVSTERRATDDTRLIKKETTVAMDFGRIAISDDLVLHLFGTPGQKRFDFMWEI LAEGMLGLVILVDSTRPETFRETNRIIDFFVSYRDTPYVIAANKQDRPNAWSPEELRLALRQPPHIKVLPCTATDRESVK NVLLELLYVIQERSED
Specific function: Unknown
COG id: COG2229
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ1339 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016433 - InterPro: IPR013684 - InterPro: IPR001806 - InterPro: IPR005225 [H]
Pfam domain/function: PF08477 Miro [H]
EC number: NA
Molecular weight: Translated: 20100; Mature: 20100
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTVKMVISGAVNAGKTEFIKTISEIEVVSTERRATDDTRLIKKETTVAMDFGRIAISDD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCEEEECCC LVLHLFGTPGQKRFDFMWEILAEGMLGLVILVDSTRPETFRETNRIIDFFVSYRDTPYVI EEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEE AANKQDRPNAWSPEELRLALRQPPHIKVLPCTATDRESVKNVLLELLYVIQERSED EECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQTVKMVISGAVNAGKTEFIKTISEIEVVSTERRATDDTRLIKKETTVAMDFGRIAISDD CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCEEEECCC LVLHLFGTPGQKRFDFMWEILAEGMLGLVILVDSTRPETFRETNRIIDFFVSYRDTPYVI EEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEE AANKQDRPNAWSPEELRLALRQPPHIKVLPCTATDRESVKNVLLELLYVIQERSED EECCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]