| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523933
Identifier: 222523933
GI number: 222523933
Start: 793150
End: 793677
Strand: Reverse
Name: 222523933
Synonym: Chy400_0644
Alternate gene names: NA
Gene position: 793677-793150 (Counterclockwise)
Preceding gene: 222523935
Following gene: 222523928
Centisome position: 15.06
GC content: 53.03
Gene sequence:
>528_bases ATGGCAGTGACCAGTCGTGAAATCCGCTCACCACGTCGAATGTCTTCGATTGCCGTGCCCAGGCCGGCACTCGGCAATTC TGCATACATCGTCACCGGTCTGCTGGCAGTTCTTGCCCTGTACGTATTGGTGAGCGCTCTTGTTGGGTGGGGGCAGACGC TACTCGATGATTGGAGATACGGACGACCACGTACATTCCATCTCACGGCAGAAGTGGGGCGGGCCGAGGAGACAGTCGGT CCTACCCGTCTGATCGCAATGAATCTTGACCGTCAGGTGCTTATTCTCGAGATTCCCGGTGGTGATGTGAACAAGACCCG AACAATCGTAGGTCCGTATCTGGTTGGTGCAAATGAGGATCTGACACCGATCACGATGCGTCTGGCTGATATGAATAGTG ACGGTCTGTCAGATTTGATTGTTGGTATCAAGAATGAGGAGATTGTCTATCTCAACCGTGGTGATAGTTTTGGTCTGGTA ACCGCTGAAGAGCGTCAGCAGATTTTGCGCCAGATGCCTGGCCGATAA
Upstream 100 bases:
>100_bases GCACAAAAGTTCTTGACAGCTCAATACGCCTCTGTTATAATTCCGAACAAGTGAGCGATTGAACTTTTGTTCTAAGCGTG TATTTCAGAGGAGGCCCGCC
Downstream 100 bases:
>100_bases ATCTGGCTGGTATAAATGTATCGCAACCCAAGTTGCCACCTGCACTGTGAGCAGGCCACGAAAGACTACCTGCTATGATG AACAACACGACGCTGCGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MAVTSREIRSPRRMSSIAVPRPALGNSAYIVTGLLAVLALYVLVSALVGWGQTLLDDWRYGRPRTFHLTAEVGRAEETVG PTRLIAMNLDRQVLILEIPGGDVNKTRTIVGPYLVGANEDLTPITMRLADMNSDGLSDLIVGIKNEEIVYLNRGDSFGLV TAEERQQILRQMPGR
Sequences:
>Translated_175_residues MAVTSREIRSPRRMSSIAVPRPALGNSAYIVTGLLAVLALYVLVSALVGWGQTLLDDWRYGRPRTFHLTAEVGRAEETVG PTRLIAMNLDRQVLILEIPGGDVNKTRTIVGPYLVGANEDLTPITMRLADMNSDGLSDLIVGIKNEEIVYLNRGDSFGLV TAEERQQILRQMPGR >Mature_174_residues AVTSREIRSPRRMSSIAVPRPALGNSAYIVTGLLAVLALYVLVSALVGWGQTLLDDWRYGRPRTFHLTAEVGRAEETVGP TRLIAMNLDRQVLILEIPGGDVNKTRTIVGPYLVGANEDLTPITMRLADMNSDGLSDLIVGIKNEEIVYLNRGDSFGLVT AEERQQILRQMPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19245; Mature: 19113
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTSREIRSPRRMSSIAVPRPALGNSAYIVTGLLAVLALYVLVSALVGWGQTLLDDWRY CCCCCHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC GRPRTFHLTAEVGRAEETVGPTRLIAMNLDRQVLILEIPGGDVNKTRTIVGPYLVGANED CCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEECCEEECCCCC LTPITMRLADMNSDGLSDLIVGIKNEEIVYLNRGDSFGLVTAEERQQILRQMPGR CCEEEEEEECCCCCCHHHHEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHCCCC >Mature Secondary Structure AVTSREIRSPRRMSSIAVPRPALGNSAYIVTGLLAVLALYVLVSALVGWGQTLLDDWRY CCCCHHHCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC GRPRTFHLTAEVGRAEETVGPTRLIAMNLDRQVLILEIPGGDVNKTRTIVGPYLVGANED CCCEEEEEEECCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCEEEECCEEECCCCC LTPITMRLADMNSDGLSDLIVGIKNEEIVYLNRGDSFGLVTAEERQQILRQMPGR CCEEEEEEECCCCCCHHHHEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA