| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523922
Identifier: 222523922
GI number: 222523922
Start: 781972
End: 782874
Strand: Reverse
Name: 222523922
Synonym: Chy400_0633
Alternate gene names: NA
Gene position: 782874-781972 (Counterclockwise)
Preceding gene: 222523923
Following gene: 222523919
Centisome position: 14.86
GC content: 56.7
Gene sequence:
>903_bases ATGACGCGCCAGCATCTTTCTGTGTTCTTGACTGCCACGTTGTTGATGCTCGTTGTGGCGGGGTGTGGTCAACCTGCGGC AGCACCAACCCCTGCGGCATTGCCAATTGCACCGGTGATCGCAGCATCCGAGCTGGTCGTTGGTGTTAATCGCCTTCCGT TTGGTTTACTGCAGGGTGGTGTACCGCTGAACGATCCTGACCTGACCCTCGATGTGACCCTATATTACGTTGGCCCCGGT GGTGATCGCACAAAGCCGGTAGCGACAACCCAGGCAGTGTATCGTGGTCAGGGACTCCCGGTCGGTCTCTACGTTGCCTA CGCCACCTTCGACCGGGCGGGTGGTTGGGAAGCCGAAATCACCATTCCGCAAACCGATGGGCCACAGTCTTCGCGTATTC GTCTTGACGTCAGTGAACGTGCGTTCGCCCCGATGGTAGGCGACCGAGCGATCCCCGTGCAGAATCTGACGGCTGCTGAT GTGCCTGCACTTGATCAGCTTACTTCTGATCCGCGTCCTGACCCGGACTTCTACCAGATGACGATTGCCGAGGCGATGAA GGCTGGCAAGCCGTTCGTCGTCTCTTTTGCGACACCGGGTTACTGCCAGACAGCGGTATGTGCACCAAATATGGCAGTCC TGAAGCAACTCAAGAGCGAATTCGGTGATCGGGTCAATTTCATTCATGTGGAAGTCTATCCGTACCCATTTGGCGAGTCA TTTCAGCAGGCCAGAATGGTCGATGCAATGAAAGAATGGAACCTGCGCACCGAGCCATGGACATTCCTGGTTGATCGCGA TGGCATTATCCAGGCCCGGTATGAGGGCGGTATCACGTTTGCCGAACTACGACCGGCGATTGCCCAACTTGCAGAGGGGC AACCGGTCAATCCTGCACCGTAA
Upstream 100 bases:
>100_bases ATGGAAGGGTTATGGGAAATTACCGTCGTGGTTGAATGGGCGGCGAACACCTATCGGGCCACCTTTCAGCGCGACGTTCT GCAATAAGATGGAGTTCATC
Downstream 100 bases:
>100_bases ATAGCGAGCCGAATCCCGCATCGGGCATGATCGAACGTTCGCGCGCTGCGTCCAGAGGAGTCAAAACGGGCGATACACAC GTGTCTAATGAATCAAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGGVPLNDPDLTLDVTLYYVGPG GDRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEITIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAAD VPALDQLTSDPRPDPDFYQMTIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGES FQQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP
Sequences:
>Translated_300_residues MTRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGGVPLNDPDLTLDVTLYYVGPG GDRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEITIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAAD VPALDQLTSDPRPDPDFYQMTIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGES FQQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP >Mature_299_residues TRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGGVPLNDPDLTLDVTLYYVGPGG DRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEITIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAADV PALDQLTSDPRPDPDFYQMTIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGESF QQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32332; Mature: 32201
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCC VPLNDPDLTLDVTLYYVGPGGDRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEI CCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEHCCCCCCEEEE TIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAADVPALDQLTSDPRPDPDFYQM EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHH TIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGES HHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCH FQQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP HHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCEEHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCC VPLNDPDLTLDVTLYYVGPGGDRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEI CCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEHCCCCCCEEEE TIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAADVPALDQLTSDPRPDPDFYQM EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHH TIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGES HHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCH FQQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP HHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCEEHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA