| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523923
Identifier: 222523923
GI number: 222523923
Start: 782888
End: 783286
Strand: Reverse
Name: 222523923
Synonym: Chy400_0634
Alternate gene names: NA
Gene position: 783286-782888 (Counterclockwise)
Preceding gene: 222523924
Following gene: 222523922
Centisome position: 14.87
GC content: 54.89
Gene sequence:
>399_bases ATGAGCTATTGGATACGAGCATTTTGTTTCCTGGTAGCCGTGCTGGTCGTTGTTGCGTGTAGCAGTGGAGCAGCACCGGT ACGGGAAACCCAAACTGTCGATGGCCTGACGATTACCCTGGAAACGCCTGATCGTCCACGTATCAACACTGCGGTCGATT TTGTTGTATTGCTGCATGATCAGCAAGGAAATGCGATCAACGACGCTTACGTCTATCTCGACCTCGACATGCCGGCGATG CCGATGGGGGTCACGCGACCGGTAGCCACTCCGGATGGGCCGGGGCGCTACTGGGCACGTACTGCATATACAATGGAAGG GTTATGGGAAATTACCGTCGTGGTTGAATGGGCGGCGAACACCTATCGGGCCACCTTTCAGCGCGACGTTCTGCAATAA
Upstream 100 bases:
>100_bases TTATCATTGATCACAACGGTCTATTTCATCTCGTGCAACTGGTGGCATTACCATTGCTTGTTGAAGGAGTACGTGCCGGG TTAAAACCGGATCGTGATGT
Downstream 100 bases:
>100_bases GATGGAGTTCATCATGACGCGCCAGCATCTTTCTGTGTTCTTGACTGCCACGTTGTTGATGCTCGTTGTGGCGGGGTGTG GTCAACCTGCGGCAGCACCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSYWIRAFCFLVAVLVVVACSSGAAPVRETQTVDGLTITLETPDRPRINTAVDFVVLLHDQQGNAINDAYVYLDLDMPAM PMGVTRPVATPDGPGRYWARTAYTMEGLWEITVVVEWAANTYRATFQRDVLQ
Sequences:
>Translated_132_residues MSYWIRAFCFLVAVLVVVACSSGAAPVRETQTVDGLTITLETPDRPRINTAVDFVVLLHDQQGNAINDAYVYLDLDMPAM PMGVTRPVATPDGPGRYWARTAYTMEGLWEITVVVEWAANTYRATFQRDVLQ >Mature_131_residues SYWIRAFCFLVAVLVVVACSSGAAPVRETQTVDGLTITLETPDRPRINTAVDFVVLLHDQQGNAINDAYVYLDLDMPAMP MGVTRPVATPDGPGRYWARTAYTMEGLWEITVVVEWAANTYRATFQRDVLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14715; Mature: 14584
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYWIRAFCFLVAVLVVVACSSGAAPVRETQTVDGLTITLETPDRPRINTAVDFVVLLHD CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEC QQGNAINDAYVYLDLDMPAMPMGVTRPVATPDGPGRYWARTAYTMEGLWEITVVVEWAAN CCCCEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCC TYRATFQRDVLQ CHHHHHHHHHCC >Mature Secondary Structure SYWIRAFCFLVAVLVVVACSSGAAPVRETQTVDGLTITLETPDRPRINTAVDFVVLLHD CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEC QQGNAINDAYVYLDLDMPAMPMGVTRPVATPDGPGRYWARTAYTMEGLWEITVVVEWAAN CCCCEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEEEECCC TYRATFQRDVLQ CHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA