Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222523904
Identifier: 222523904
GI number: 222523904
Start: 749821
End: 751548
Strand: Direct
Name: 222523904
Synonym: Chy400_0613
Alternate gene names: NA
Gene position: 749821-751548 (Clockwise)
Preceding gene: 222523885
Following gene: 222523906
Centisome position: 14.23
GC content: 55.03
Gene sequence:
>1728_bases ATGCAAAGATTACTCGCAGGATGTTTCATTGGCGTGCTCGGTTTCATAACCGCTTGCAGTGCCCCCCTTGTGTCTTCAAC GAGCAGCACAACTACAACACAGATCACAGCCGAATCGGTGGCAGAACAGCCCGCCACAACGACAAACATCCCACAGTTGA CCCCAGCCGCTGCGGTCGTTGTGACATCCGCAGCCGAAGCGATCCCGATTGAATTGCACGGTGATCAGATCAGTGCCGGT ACCGGTGTAGAGGTCAATGGAACTGTCGCAACGATCACGAGTGGCGGTGCCTACCGAATCAGTGGTCAGCTCCAGGCCGG AAGCATTGTTGTGAATGCCGCCGCGACAGACGACGTTACGCTCTATCTTGACGGCGTGACAATTCATAGCGTGGAGAGTG CCCCTCTCTACATCGACCGTGCCGGTCAGGTGACCATTGTCCTGGTCGATGGCAGCATCAATACCCTCAGCGATGAAGCA AGAACAGCCGATCAAAGTAGTGCGCCGAATGCAACGCTCTACAGTGATGCCGATCTGGTGATTACCGGTCAGGGACAGTT GATTGTTGCAGCTCATTTCAACGACGGTATTGCTTCCACGAAAGGGCTGGTCATTGAAGACGGGCATATTCAGGTAACGG CTGTTGATGATGGGTTGCGCGGCAAAGAGTATCTCCTGCTGCGTGGTGGTCAGATCGACATGACAGCCGGTGGTGATGGC TTCACTGCCGATGCTGATGGACAGGGGGTGATCATGATCGAAGGCGGCCAGGTAACAATAACGGCGAACGGTGATGGGGT ACAGGCCGCAGCAGATATTGTGGTACAAGGAGGAATGCTTGACATTATAGCCGGCGGTGGCAGCACAGCCACCCTGTCTG CCGACGCATCGGCGAAGGGTCTTAAAGCAGCGGGACAGATCATCATCAACGATGGTGAGATCAGGCTTGATGTTGCTGAA GATGGTCTGCACGCCGATACCTCAATTACTATCAATGGTGGCACATTCACGATTGCCGCCGCTGACGATGCAATCCACGC TGAACAGCAGGTAACTATCACGGCTGGCGAAATGAATGTGACAGATTCGTATGAAGGGATTGAGGGTCAGCACATCCGCA TTGATGGCGGTACGATCACGATCATTGCCAGCGATGATGCGCTGAACGCTGCCGATGGCAGCGGTGCCCAGGGTGGCGGT TTCGGTGGCATGGGTGGTGGACAATGGACGCTAACCATGACCGGCGGCTCGCTAACAGTAGATGCCGGTGGCGATGGGAT CGATGTTAATGGTAGCATCACGATGAGTGGTGGTGTTATGGTGGTATACGGGCCAACAGAGTCCATGAATGCTGCCCTCG ACTATGACCGGGCTTTTACCATAAGCGCTGGTCAATTGATCGCCGTTGGTAGTGCCGGTATGGCGATGGCACCAGATACC AGCTCGACCCAACCCGCTGTGCTGATCAACCTCAGCACGGTGCAGACAGCAGGAACATCAATTGCTATCGTGAATGCTGC TGGCGAACCAATTGTTAGCCTGACACCAGATAAATCGTATCAATCACTCGTCTACTCAGGCACCGGTTTAACAGTGGGCG AACAGTATCAGGTTGTGGTTGGCGGAGCGGTCAACACGAGCTTCGTGCAGAACGACATCATTACGCGAGTGGGTACGACA ACAGGGCCAGGCGGGCCGGGAAACCCGATGCGTCCGCCACGTCCATAG
Upstream 100 bases:
>100_bases AGTCTGCGCTGATGAAGCGGAATCACTGCACGGTAACTCACCGGTGTGAATAGTGCCTTCAACAATGCATGTATTGCGAT AAGGATGTGGAGGTTTTCTT
Downstream 100 bases:
>100_bases CAACATCACGCCTTGAAATGGCCTAACCCTCTTCCCACACCCACGATCCCGCCGGTTTTCCGACCAGATAGCCAGTTCCG GCGGGATCGCGGGCGACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MQRLLAGCFIGVLGFITACSAPLVSSTSSTTTTQITAESVAEQPATTTNIPQLTPAAAVVVTSAAEAIPIELHGDQISAG TGVEVNGTVATITSGGAYRISGQLQAGSIVVNAAATDDVTLYLDGVTIHSVESAPLYIDRAGQVTIVLVDGSINTLSDEA RTADQSSAPNATLYSDADLVITGQGQLIVAAHFNDGIASTKGLVIEDGHIQVTAVDDGLRGKEYLLLRGGQIDMTAGGDG FTADADGQGVIMIEGGQVTITANGDGVQAAADIVVQGGMLDIIAGGGSTATLSADASAKGLKAAGQIIINDGEIRLDVAE DGLHADTSITINGGTFTIAAADDAIHAEQQVTITAGEMNVTDSYEGIEGQHIRIDGGTITIIASDDALNAADGSGAQGGG FGGMGGGQWTLTMTGGSLTVDAGGDGIDVNGSITMSGGVMVVYGPTESMNAALDYDRAFTISAGQLIAVGSAGMAMAPDT SSTQPAVLINLSTVQTAGTSIAIVNAAGEPIVSLTPDKSYQSLVYSGTGLTVGEQYQVVVGGAVNTSFVQNDIITRVGTT TGPGGPGNPMRPPRP
Sequences:
>Translated_575_residues MQRLLAGCFIGVLGFITACSAPLVSSTSSTTTTQITAESVAEQPATTTNIPQLTPAAAVVVTSAAEAIPIELHGDQISAG TGVEVNGTVATITSGGAYRISGQLQAGSIVVNAAATDDVTLYLDGVTIHSVESAPLYIDRAGQVTIVLVDGSINTLSDEA RTADQSSAPNATLYSDADLVITGQGQLIVAAHFNDGIASTKGLVIEDGHIQVTAVDDGLRGKEYLLLRGGQIDMTAGGDG FTADADGQGVIMIEGGQVTITANGDGVQAAADIVVQGGMLDIIAGGGSTATLSADASAKGLKAAGQIIINDGEIRLDVAE DGLHADTSITINGGTFTIAAADDAIHAEQQVTITAGEMNVTDSYEGIEGQHIRIDGGTITIIASDDALNAADGSGAQGGG FGGMGGGQWTLTMTGGSLTVDAGGDGIDVNGSITMSGGVMVVYGPTESMNAALDYDRAFTISAGQLIAVGSAGMAMAPDT SSTQPAVLINLSTVQTAGTSIAIVNAAGEPIVSLTPDKSYQSLVYSGTGLTVGEQYQVVVGGAVNTSFVQNDIITRVGTT TGPGGPGNPMRPPRP >Mature_575_residues MQRLLAGCFIGVLGFITACSAPLVSSTSSTTTTQITAESVAEQPATTTNIPQLTPAAAVVVTSAAEAIPIELHGDQISAG TGVEVNGTVATITSGGAYRISGQLQAGSIVVNAAATDDVTLYLDGVTIHSVESAPLYIDRAGQVTIVLVDGSINTLSDEA RTADQSSAPNATLYSDADLVITGQGQLIVAAHFNDGIASTKGLVIEDGHIQVTAVDDGLRGKEYLLLRGGQIDMTAGGDG FTADADGQGVIMIEGGQVTITANGDGVQAAADIVVQGGMLDIIAGGGSTATLSADASAKGLKAAGQIIINDGEIRLDVAE DGLHADTSITINGGTFTIAAADDAIHAEQQVTITAGEMNVTDSYEGIEGQHIRIDGGTITIIASDDALNAADGSGAQGGG FGGMGGGQWTLTMTGGSLTVDAGGDGIDVNGSITMSGGVMVVYGPTESMNAALDYDRAFTISAGQLIAVGSAGMAMAPDT SSTQPAVLINLSTVQTAGTSIAIVNAAGEPIVSLTPDKSYQSLVYSGTGLTVGEQYQVVVGGAVNTSFVQNDIITRVGTT TGPGGPGNPMRPPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57405; Mature: 57405
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRLLAGCFIGVLGFITACSAPLVSSTSSTTTTQITAESVAEQPATTTNIPQLTPAAAVV CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCEEEE VTSAAEAIPIELHGDQISAGTGVEVNGTVATITSGGAYRISGQLQAGSIVVNAAATDDVT EECCCCEEEEEEECCEECCCCCEEECCEEEEEECCCEEEEECEEEECEEEEEEECCCCEE LYLDGVTIHSVESAPLYIDRAGQVTIVLVDGSINTLSDEARTADQSSAPNATLYSDADLV EEECCEEEEECCCCCEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCCCEEEECCCCEE ITGQGQLIVAAHFNDGIASTKGLVIEDGHIQVTAVDDGLRGKEYLLLRGGQIDMTAGGDG EECCCCEEEEEECCCCCCCCCCEEEECCEEEEEEECCCCCCCEEEEEECCEEEEEECCCC FTADADGQGVIMIEGGQVTITANGDGVQAAADIVVQGGMLDIIAGGGSTATLSADASAKG EEECCCCCEEEEEECCEEEEEECCCCCEEEEEEEEECCEEEEEECCCCEEEEECCCCCCC LKAAGQIIINDGEIRLDVAEDGLHADTSITINGGTFTIAAADDAIHAEQQVTITAGEMNV CCCCCEEEEECCEEEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEECCEEC TDSYEGIEGQHIRIDGGTITIIASDDALNAADGSGAQGGGFGGMGGGQWTLTMTGGSLTV CCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEE DAGGDGIDVNGSITMSGGVMVVYGPTESMNAALDYDRAFTISAGQLIAVGSAGMAMAPDT ECCCCEEECCCEEEECCCEEEEECCCCCCCEEECCCCEEEEECCCEEEECCCCEEECCCC SSTQPAVLINLSTVQTAGTSIAIVNAAGEPIVSLTPDKSYQSLVYSGTGLTVGEQYQVVV CCCCCEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCEEEEECCCCEECCEEEEEE GGAVNTSFVQNDIITRVGTTTGPGGPGNPMRPPRP ECCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQRLLAGCFIGVLGFITACSAPLVSSTSSTTTTQITAESVAEQPATTTNIPQLTPAAAVV CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCEEEE VTSAAEAIPIELHGDQISAGTGVEVNGTVATITSGGAYRISGQLQAGSIVVNAAATDDVT EECCCCEEEEEEECCEECCCCCEEECCEEEEEECCCEEEEECEEEECEEEEEEECCCCEE LYLDGVTIHSVESAPLYIDRAGQVTIVLVDGSINTLSDEARTADQSSAPNATLYSDADLV EEECCEEEEECCCCCEEEECCCCEEEEEECCCCCCCCCHHHCCCCCCCCCEEEECCCCEE ITGQGQLIVAAHFNDGIASTKGLVIEDGHIQVTAVDDGLRGKEYLLLRGGQIDMTAGGDG EECCCCEEEEEECCCCCCCCCCEEEECCEEEEEEECCCCCCCEEEEEECCEEEEEECCCC FTADADGQGVIMIEGGQVTITANGDGVQAAADIVVQGGMLDIIAGGGSTATLSADASAKG EEECCCCCEEEEEECCEEEEEECCCCCEEEEEEEEECCEEEEEECCCCEEEEECCCCCCC LKAAGQIIINDGEIRLDVAEDGLHADTSITINGGTFTIAAADDAIHAEQQVTITAGEMNV CCCCCEEEEECCEEEEEEECCCCCCCCEEEECCCEEEEEECCCCCCCCEEEEEEECCEEC TDSYEGIEGQHIRIDGGTITIIASDDALNAADGSGAQGGGFGGMGGGQWTLTMTGGSLTV CCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEE DAGGDGIDVNGSITMSGGVMVVYGPTESMNAALDYDRAFTISAGQLIAVGSAGMAMAPDT ECCCCEEECCCEEEECCCEEEEECCCCCCCEEECCCCEEEEECCCEEEECCCCEEECCCC SSTQPAVLINLSTVQTAGTSIAIVNAAGEPIVSLTPDKSYQSLVYSGTGLTVGEQYQVVV CCCCCEEEEEEEEEEECCCEEEEEECCCCCEEEECCCCCCCEEEEECCCCEECCEEEEEE GGAVNTSFVQNDIITRVGTTTGPGGPGNPMRPPRP ECCCCCHHHHCCHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA