| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is 222523892
Identifier: 222523892
GI number: 222523892
Start: 736966
End: 738438
Strand: Reverse
Name: 222523892
Synonym: Chy400_0601
Alternate gene names: NA
Gene position: 738438-736966 (Counterclockwise)
Preceding gene: 222523893
Following gene: 222523891
Centisome position: 14.01
GC content: 57.03
Gene sequence:
>1473_bases ATGACTATTCTGGTGATGTGCAATCTCGGTAACAGTGATCTGAACGCCGATAGCAAACGTCCGTCCAAACCACGTCCCGA AGGCGAGCAGCTCTGGCGTAGTTTTACCGAACATCAATTCGAGTTGCCGATTATCGAGCCATGTTTGCGCTTTATTATCG GGCGTCATCCGGGTGATCAGTTGCGCCTGGTCTGTTTTTACACCGACCAGCCGGAAAATCCGGAGACAACCAAAGCTGAT CGTTTCGGCGTCAGTCTCCGCGACAAGGATACAATCTGGTTGGCTCATATCGCGCAGCGTCTGATCAGGGAAAAGTTTGC CGGTCAGGTCAGCGAGGTAGAGATCGTGCGGATCGAGAACAGTCGTGGCCCCGATCTCAATCCCAGTGTCTACGACGAGG TCTTCGAGGCGTATGCCTATCTGCTACAGCGCTTCGTCAATCAGCAGGTTGATCGGTGTTACATTCTCACTGCGGGTGGT ATTCCGGCCTGCAACTTTGCGCTTCAGCTTCAGGCAATGATTGCCTTCGCTGATCGCTGCCATTTCATCTACCCGCCTGA AGGTGGCAGGGTCACCGAATTGCGGATCGGGGAAGAGATGAGCAAAGCCTTTCAGCGGGTCAACGCGCTGAACGCTCTTG ACCAGCGCAACTTTCCGGCTGCGCTGCTCAGTGCGCGGGCTGCCCGGGTCGGCGAATGGATCGTCGCGTTACTCGAATAT GCCGTCTACCGCGAAGCCTTTGACTTTCAGCAGGCCACGCAGGCGGGCGCACGGGCGCAACGTCATGCCAGTGGTAGCAT TCGCGAGTTCTGTCGTGAATTGCAAGACGATCTGCAACAGTTGATCCGGAATGACGCCGCCGCACTGTTGCGCGAGGTGG CGTACAATGCCGACATCGCGTATCGCAATGGCCGTTATGCCGATCTGCTCGGTCGGCTCTTCCGCTTCCAGGAAGGTGTG TTGCGACTGATTGTCGAGAAATACCTCGGTTTACCGACCGATTTCAGCAAAGAACAGCGCGACGCCAGTCTGGCGCGGTA TCTGGAGCTGATTGATGGCAACCCGGCCCTGCGCGACTTTCTCGATCAGCGTACCCTTGACGGCAAACCGCTCCGCTACC GCGATGGCCCGAACCGTCCGGTGATGCAGGCGTTACTGGAGTTTGTCCTGAATGGTGGAACACGGGCTGATGGCACACCC TTTGCCACGAAGAAAGACCGTGAGCGGCTGAGTGGGGTGCGCGAACGCCTGAACCGATTGGACGCGCTGGCCGAATTGCG CAACCAGAGCGTGATTGCCCACGGTTTTGCCGGCGTTGCGCGGGAAGCGATTGATAGCGCCTACAAGGGTGGTGCTGACC AGATTGTGCCCGATCTCTACAAGACGATTGAACTGCTCGATAATCCCGTTCACAAATCGCCGTTTGATCGCATTGCCGAG ACGGTTCAGCGCGAGCTGCGGAGAGGTACATGA
Upstream 100 bases:
>100_bases CCGGCGATCTCTTCCCGGCGTCGCGGCGCGTCATCATGCGCAACGGTCAACCCTGGTTGCCACCCGGTTGGGTCTGTCTG ACAATAGAGGAGCGTGGCAA
Downstream 100 bases:
>100_bases ATGCTCTGTTGATCTGTAATGTTGGTGGGCGGGATGTCCTGCATCCCGCTCTTCCCAAGAACGGCCATTCCGAACGGCAG TGGGCGCAGACAGCGCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 489
Protein sequence:
>490_residues MTILVMCNLGNSDLNADSKRPSKPRPEGEQLWRSFTEHQFELPIIEPCLRFIIGRHPGDQLRLVCFYTDQPENPETTKAD RFGVSLRDKDTIWLAHIAQRLIREKFAGQVSEVEIVRIENSRGPDLNPSVYDEVFEAYAYLLQRFVNQQVDRCYILTAGG IPACNFALQLQAMIAFADRCHFIYPPEGGRVTELRIGEEMSKAFQRVNALNALDQRNFPAALLSARAARVGEWIVALLEY AVYREAFDFQQATQAGARAQRHASGSIREFCRELQDDLQQLIRNDAAALLREVAYNADIAYRNGRYADLLGRLFRFQEGV LRLIVEKYLGLPTDFSKEQRDASLARYLELIDGNPALRDFLDQRTLDGKPLRYRDGPNRPVMQALLEFVLNGGTRADGTP FATKKDRERLSGVRERLNRLDALAELRNQSVIAHGFAGVAREAIDSAYKGGADQIVPDLYKTIELLDNPVHKSPFDRIAE TVQRELRRGT
Sequences:
>Translated_490_residues MTILVMCNLGNSDLNADSKRPSKPRPEGEQLWRSFTEHQFELPIIEPCLRFIIGRHPGDQLRLVCFYTDQPENPETTKAD RFGVSLRDKDTIWLAHIAQRLIREKFAGQVSEVEIVRIENSRGPDLNPSVYDEVFEAYAYLLQRFVNQQVDRCYILTAGG IPACNFALQLQAMIAFADRCHFIYPPEGGRVTELRIGEEMSKAFQRVNALNALDQRNFPAALLSARAARVGEWIVALLEY AVYREAFDFQQATQAGARAQRHASGSIREFCRELQDDLQQLIRNDAAALLREVAYNADIAYRNGRYADLLGRLFRFQEGV LRLIVEKYLGLPTDFSKEQRDASLARYLELIDGNPALRDFLDQRTLDGKPLRYRDGPNRPVMQALLEFVLNGGTRADGTP FATKKDRERLSGVRERLNRLDALAELRNQSVIAHGFAGVAREAIDSAYKGGADQIVPDLYKTIELLDNPVHKSPFDRIAE TVQRELRRGT >Mature_489_residues TILVMCNLGNSDLNADSKRPSKPRPEGEQLWRSFTEHQFELPIIEPCLRFIIGRHPGDQLRLVCFYTDQPENPETTKADR FGVSLRDKDTIWLAHIAQRLIREKFAGQVSEVEIVRIENSRGPDLNPSVYDEVFEAYAYLLQRFVNQQVDRCYILTAGGI PACNFALQLQAMIAFADRCHFIYPPEGGRVTELRIGEEMSKAFQRVNALNALDQRNFPAALLSARAARVGEWIVALLEYA VYREAFDFQQATQAGARAQRHASGSIREFCRELQDDLQQLIRNDAAALLREVAYNADIAYRNGRYADLLGRLFRFQEGVL RLIVEKYLGLPTDFSKEQRDASLARYLELIDGNPALRDFLDQRTLDGKPLRYRDGPNRPVMQALLEFVLNGGTRADGTPF ATKKDRERLSGVRERLNRLDALAELRNQSVIAHGFAGVAREAIDSAYKGGADQIVPDLYKTIELLDNPVHKSPFDRIAET VQRELRRGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55690; Mature: 55559
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILVMCNLGNSDLNADSKRPSKPRPEGEQLWRSFTEHQFELPIIEPCLRFIIGRHPGDQ CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC LRLVCFYTDQPENPETTKADRFGVSLRDKDTIWLAHIAQRLIREKFAGQVSEVEIVRIEN EEEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC SRGPDLNPSVYDEVFEAYAYLLQRFVNQQVDRCYILTAGGIPACNFALQLQAMIAFADRC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHCC HFIYPPEGGRVTELRIGEEMSKAFQRVNALNALDQRNFPAALLSARAARVGEWIVALLEY CEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AVYREAFDFQQATQAGARAQRHASGSIREFCRELQDDLQQLIRNDAAALLREVAYNADIA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE YRNGRYADLLGRLFRFQEGVLRLIVEKYLGLPTDFSKEQRDASLARYLELIDGNPALRDF ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH LDQRTLDGKPLRYRDGPNRPVMQALLEFVLNGGTRADGTPFATKKDRERLSGVRERLNRL HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DALAELRNQSVIAHGFAGVAREAIDSAYKGGADQIVPDLYKTIELLDNPVHKSPFDRIAE HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TVQRELRRGT HHHHHHHCCC >Mature Secondary Structure TILVMCNLGNSDLNADSKRPSKPRPEGEQLWRSFTEHQFELPIIEPCLRFIIGRHPGDQ EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC LRLVCFYTDQPENPETTKADRFGVSLRDKDTIWLAHIAQRLIREKFAGQVSEVEIVRIEN EEEEEEECCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC SRGPDLNPSVYDEVFEAYAYLLQRFVNQQVDRCYILTAGGIPACNFALQLQAMIAFADRC CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHCC HFIYPPEGGRVTELRIGEEMSKAFQRVNALNALDQRNFPAALLSARAARVGEWIVALLEY CEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH AVYREAFDFQQATQAGARAQRHASGSIREFCRELQDDLQQLIRNDAAALLREVAYNADIA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE YRNGRYADLLGRLFRFQEGVLRLIVEKYLGLPTDFSKEQRDASLARYLELIDGNPALRDF ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHH LDQRTLDGKPLRYRDGPNRPVMQALLEFVLNGGTRADGTPFATKKDRERLSGVRERLNRL HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH DALAELRNQSVIAHGFAGVAREAIDSAYKGGADQIVPDLYKTIELLDNPVHKSPFDRIAE HHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TVQRELRRGT HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA