| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523891
Identifier: 222523891
GI number: 222523891
Start: 735515
End: 736969
Strand: Reverse
Name: 222523891
Synonym: Chy400_0600
Alternate gene names: NA
Gene position: 736969-735515 (Counterclockwise)
Preceding gene: 222523892
Following gene: 222523890
Centisome position: 13.99
GC content: 60.62
Gene sequence:
>1455_bases ATGAATGCTCTGTTGATCTGTAATGTTGGTGGGCGGGATGTCCTGCATCCCGCTCTTCCCAAGAACGGCCATTCCGAACG GCAGTGGGCGCAGACAGCGCTGGAGCGCTATCCTGAATTGTGCGGCACTTTCAGCCTGCCGATCATCAGCAAGGCCCTGC ACTACCTGGCGACTCGTCGCGTCGTGATCGACCACGTGATCCTGATCGCCTCAGACCAGCCACCACCACCCGTCGGCAAC GCCAAATTCTGGTCGAGTGATACCATCTACTCGGCGCAGATTATTGCCCACCTGCTGTGCGACGGCCTCACCCCCTACCC GCGGCTTGACGGGCAGCAGATCACGATCTGGACAATCCAGACTGAAGATGGTCAGGGGTGCGATCCCTCCGATTACGACC TGACCCTACGCTTTCTCGAACGGCGGCTGGCTGAGTTGAGACGGGTGTACCCGCACCATACCGCCTTTTTTGAAGTGACT GGCGGTACCCCGGCGATGACGACCGGTCTGCTCATTGCCGGCACCGAAATCTTCGGCAGTCAGACGGAAATCCTCTCCGT CCATCCCAACCAGGAGCTGCCGATTGCCCTGAACACCGGCAAACGCCTGCTGGCTACGCCGTTACGGGCTTCGCTGCGTT CCCACGCCGCGTCGTATGCCTACGCCGCCGCAGCCCGTACCTTCCTGGAGCATGAGGCAATCATCACCGACCGGCTTGAG CCAACGGCGGCACGCCTGATTGCACCTCTGCTCGCCTATGCCCATCACCGCTTCAACTTCGACTTTGCCAGTGCACGCAG CGCATTGCAGCGGGTGCGTAATGCCGGGCCATGGCGGGCTGAACTGGATTCCTTACTGGCGCAGGTCAATCAACCGGTGC GCCAGTTCCTGCTGGCTGAAGTGGTACGCGGAGCGGCGGCTCGTTACCAGATCGGCCTGTATGCCGACTTTCTCACTCAG GTGGTACGGTTTGAAGAGAACCTGCTACGCTATCTCTGTTTACAGCAGGGGGCCTGGTTTTGCAACCGGCAGCGGCAGCT TGATCCAGATGGTACCTATCTGGCGCGGGAGTGGCTGAGTCAGCAGACATTCACCCTCAGTCGGGATCGCGATCCGAACC GCGATCTGATTGCCGACCGCTCGGTGATGCGGGAACTGCTCGGTAACCTGCTGGGTCGGGCGCAACCGGGTCAACACAAC TTGCTGACGGCAATTGATCGGCTTGGTGAACTGGTCAAGCGGCGTAATGAGCTGACCCATCATCTGGAGGGGGTGCAGAA GGCGGGGCTGGCCCGCGCCTTTGCCGGGCCGCAGGCGTCACCGTCGGCTGCCGATCAAATTGTTCCGCACCTCGAACAGC TTTACGAACAGGTGTGTCACCAGCCATTGCCGCCATCACCCTATCAGCACATAAACCGGCTCCTGGATCGCTTACTCCAG GCGACGCAGACCTGA
Upstream 100 bases:
>100_bases CCGATCTCTACAAGACGATTGAACTGCTCGATAATCCCGTTCACAAATCGCCGTTTGATCGCATTGCCGAGACGGTTCAG CGCGAGCTGCGGAGAGGTAC
Downstream 100 bases:
>100_bases GCGGAGCTTTTGGGGTGAGCGTATGCGGTGTAGAGGCCATACGTCACATTACATCAAATCGGGTGTTACAAGGGGTATTA TATGCTGTCCGGCACGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MNALLICNVGGRDVLHPALPKNGHSERQWAQTALERYPELCGTFSLPIISKALHYLATRRVVIDHVILIASDQPPPPVGN AKFWSSDTIYSAQIIAHLLCDGLTPYPRLDGQQITIWTIQTEDGQGCDPSDYDLTLRFLERRLAELRRVYPHHTAFFEVT GGTPAMTTGLLIAGTEIFGSQTEILSVHPNQELPIALNTGKRLLATPLRASLRSHAASYAYAAAARTFLEHEAIITDRLE PTAARLIAPLLAYAHHRFNFDFASARSALQRVRNAGPWRAELDSLLAQVNQPVRQFLLAEVVRGAAARYQIGLYADFLTQ VVRFEENLLRYLCLQQGAWFCNRQRQLDPDGTYLAREWLSQQTFTLSRDRDPNRDLIADRSVMRELLGNLLGRAQPGQHN LLTAIDRLGELVKRRNELTHHLEGVQKAGLARAFAGPQASPSAADQIVPHLEQLYEQVCHQPLPPSPYQHINRLLDRLLQ ATQT
Sequences:
>Translated_484_residues MNALLICNVGGRDVLHPALPKNGHSERQWAQTALERYPELCGTFSLPIISKALHYLATRRVVIDHVILIASDQPPPPVGN AKFWSSDTIYSAQIIAHLLCDGLTPYPRLDGQQITIWTIQTEDGQGCDPSDYDLTLRFLERRLAELRRVYPHHTAFFEVT GGTPAMTTGLLIAGTEIFGSQTEILSVHPNQELPIALNTGKRLLATPLRASLRSHAASYAYAAAARTFLEHEAIITDRLE PTAARLIAPLLAYAHHRFNFDFASARSALQRVRNAGPWRAELDSLLAQVNQPVRQFLLAEVVRGAAARYQIGLYADFLTQ VVRFEENLLRYLCLQQGAWFCNRQRQLDPDGTYLAREWLSQQTFTLSRDRDPNRDLIADRSVMRELLGNLLGRAQPGQHN LLTAIDRLGELVKRRNELTHHLEGVQKAGLARAFAGPQASPSAADQIVPHLEQLYEQVCHQPLPPSPYQHINRLLDRLLQ ATQT >Mature_484_residues MNALLICNVGGRDVLHPALPKNGHSERQWAQTALERYPELCGTFSLPIISKALHYLATRRVVIDHVILIASDQPPPPVGN AKFWSSDTIYSAQIIAHLLCDGLTPYPRLDGQQITIWTIQTEDGQGCDPSDYDLTLRFLERRLAELRRVYPHHTAFFEVT GGTPAMTTGLLIAGTEIFGSQTEILSVHPNQELPIALNTGKRLLATPLRASLRSHAASYAYAAAARTFLEHEAIITDRLE PTAARLIAPLLAYAHHRFNFDFASARSALQRVRNAGPWRAELDSLLAQVNQPVRQFLLAEVVRGAAARYQIGLYADFLTQ VVRFEENLLRYLCLQQGAWFCNRQRQLDPDGTYLAREWLSQQTFTLSRDRDPNRDLIADRSVMRELLGNLLGRAQPGQHN LLTAIDRLGELVKRRNELTHHLEGVQKAGLARAFAGPQASPSAADQIVPHLEQLYEQVCHQPLPPSPYQHINRLLDRLLQ ATQT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54284; Mature: 54284
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALLICNVGGRDVLHPALPKNGHSERQWAQTALERYPELCGTFSLPIISKALHYLATRR CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VVIDHVILIASDQPPPPVGNAKFWSSDTIYSAQIIAHLLCDGLTPYPRLDGQQITIWTIQ HHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE TEDGQGCDPSDYDLTLRFLERRLAELRRVYPHHTAFFEVTGGTPAMTTGLLIAGTEIFGS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEECHHHHCC QTEILSVHPNQELPIALNTGKRLLATPLRASLRSHAASYAYAAAARTFLEHEAIITDRLE CCEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTAARLIAPLLAYAHHRFNFDFASARSALQRVRNAGPWRAELDSLLAQVNQPVRQFLLAE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VVRGAAARYQIGLYADFLTQVVRFEENLLRYLCLQQGAWFCNRQRQLDPDGTYLAREWLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHH QQTFTLSRDRDPNRDLIADRSVMRELLGNLLGRAQPGQHNLLTAIDRLGELVKRRNELTH HCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HLEGVQKAGLARAFAGPQASPSAADQIVPHLEQLYEQVCHQPLPPSPYQHINRLLDRLLQ HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ATQT HHCC >Mature Secondary Structure MNALLICNVGGRDVLHPALPKNGHSERQWAQTALERYPELCGTFSLPIISKALHYLATRR CCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VVIDHVILIASDQPPPPVGNAKFWSSDTIYSAQIIAHLLCDGLTPYPRLDGQQITIWTIQ HHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEE TEDGQGCDPSDYDLTLRFLERRLAELRRVYPHHTAFFEVTGGTPAMTTGLLIAGTEIFGS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHEECHHHHCC QTEILSVHPNQELPIALNTGKRLLATPLRASLRSHAASYAYAAAARTFLEHEAIITDRLE CCEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTAARLIAPLLAYAHHRFNFDFASARSALQRVRNAGPWRAELDSLLAQVNQPVRQFLLAE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH VVRGAAARYQIGLYADFLTQVVRFEENLLRYLCLQQGAWFCNRQRQLDPDGTYLAREWLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCHHHHHHHHHH QQTFTLSRDRDPNRDLIADRSVMRELLGNLLGRAQPGQHNLLTAIDRLGELVKRRNELTH HCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HLEGVQKAGLARAFAGPQASPSAADQIVPHLEQLYEQVCHQPLPPSPYQHINRLLDRLLQ HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH ATQT HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA