| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523869
Identifier: 222523869
GI number: 222523869
Start: 688326
End: 688616
Strand: Reverse
Name: 222523869
Synonym: Chy400_0577
Alternate gene names: NA
Gene position: 688616-688326 (Counterclockwise)
Preceding gene: 222523870
Following gene: 222523868
Centisome position: 13.07
GC content: 55.33
Gene sequence:
>291_bases ATGGGTTGGACATTTCTTACTAATCACGCCCAGGTACTCCTCTGTATCGCGCGCAATCCACGGGTAACCGCCCAGGAGAT TGCCCGCACAATTGGGATTACCGAACGGGCTGTTCAGCGTATTCTGCACGATTTGCACGAGGCCGGCTATATTTCACACG TGCGTGAAGGCCGGCACAATCACTACACCATCTACGGCGATCAGCCGCTCCGTCACCCGACTGTGCAGAACATTACCGTT CGTGAATTGCTGGCAGCGCTGACCAATGGTGCCGCTGTGATGGCAAAGTGA
Upstream 100 bases:
>100_bases ATCCCTTTACAGGCAACTTTTCCCTCTCTCACCTGACATAACACTGGTACAATATTTACAGGAACAGGTTTTTGCATCAC ATGCCTGGAAAGATTCTGGT
Downstream 100 bases:
>100_bases GCCGGTGCAGGGGCGTATCGTTCGCCCCTGCCCGCCATATCGCGCTGTTTCCCCTTGTTCCCGATGCGCATATTTCATGC AAAGATGATTTGCCCTTGAT
Product: Helix-turn-helix type 11 domain-containing protein
Products: NA
Alternate protein names: Helix-Turn-Helix Type; Transcriptional Regulator; AsnC Family Transcriptional Regulator; ArsR Family Transcriptional Regulator; Transcriptional Regulator PaaX Family; Transcriptional Regulator TrmB
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MGWTFLTNHAQVLLCIARNPRVTAQEIARTIGITERAVQRILHDLHEAGYISHVREGRHNHYTIYGDQPLRHPTVQNITV RELLAALTNGAAVMAK
Sequences:
>Translated_96_residues MGWTFLTNHAQVLLCIARNPRVTAQEIARTIGITERAVQRILHDLHEAGYISHVREGRHNHYTIYGDQPLRHPTVQNITV RELLAALTNGAAVMAK >Mature_95_residues GWTFLTNHAQVLLCIARNPRVTAQEIARTIGITERAVQRILHDLHEAGYISHVREGRHNHYTIYGDQPLRHPTVQNITVR ELLAALTNGAAVMAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10818; Mature: 10686
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWTFLTNHAQVLLCIARNPRVTAQEIARTIGITERAVQRILHDLHEAGYISHVREGRHN CCCEEECCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCC HYTIYGDQPLRHPTVQNITVRELLAALTNGAAVMAK CEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEECC >Mature Secondary Structure GWTFLTNHAQVLLCIARNPRVTAQEIARTIGITERAVQRILHDLHEAGYISHVREGRHN CCEEECCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHCCCCC HYTIYGDQPLRHPTVQNITVRELLAALTNGAAVMAK CEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA