| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is fbpB2 [H]
Identifier: 222523642
GI number: 222523642
Start: 413462
End: 415186
Strand: Reverse
Name: fbpB2 [H]
Synonym: Chy400_0348
Alternate gene names: 222523642
Gene position: 415186-413462 (Counterclockwise)
Preceding gene: 222523643
Following gene: 222523641
Centisome position: 7.88
GC content: 58.26
Gene sequence:
>1725_bases ATGCGCAGTATGATCGTCCCGTTGACTCGCCGGTATTGGAACGTCATGCTGATTAAACGTCAACAACTTGCCGGAAACTG GTCACTCCCGGATCGCTGGAGTATCATTGCCTTCCTGATCGCCGGGCTGGCGCTGTTGCCTATCGCGATCATTTTGCGCA TGCTGGTGCAGCCTGCCCCCGATGTGTGGCAGCATCTCTGGGCCACCCGGCTGGCCGAGTTCCTTTCCAACACGGTTGTG CTGTTGATCGGAGTTGGTCTCGGCACAACGCTGCTGGGTACGGCGCTGGCCTGGCTGGTGACGGCGTATCGTTTTCCTGG TCAGCGGCTGTTCGATTGGGCATTGATGCTGCCTATGGCGGTGCCTTCGTATGTGCTGGCTTTTGTCTTCATGGCGACGT TCGATTACGCCGGTCCGGTGCAAAAAGCATTGCGCGCCTGGTTTGGGAGCAGTGCCTGGTTTCCGTCGATCCGCTCTGGC GGCGGAGCGATATTCGTCATGACGCTGACCCTGTACCCATATGTCTATCTATTGGCACGTGCTGCATTCCACGAACATGG CCGGGGCACGTTCGAGGTTGCCCGCACACTTGGCGTGACCCGTCTTCAGGCATTCTTGCGGGTTGTGCTGCCGATGGCGC GCCCCTCCCTGGTTGCCGGCCTTTCCCTGGTGTTGATGGAAGTCTTGACCGATGTCGGTACGGTACGCTTTTTGAATTTT CCCACTCTGAGTGATGGTATCTTTCGGATCTGGCACGGCATGATGGATCGCGATGCAGCGCTGCAATCAGCCGCAGTGCT CCTGCTGTTTGCCTTCGGCGCGTTGCTGATTGAACGCTATACGCGAGGACGTGCCCGCTATGTGCAAGAGGGTTCGCGTG GACACGGCCTTGCCCAGGTGCCCTTAACCGGTTGGCGTGCTCTGGCCGCCACCCTGGTATGTAGCTTTGTATTGGCCACG GCCTTTCTGCTCCCGGTGTCGCAATTGATCCAGTGGAGTGTGCATGAGTTGTGGCACCGGATGCCTGAAGGCTTGCTGGC GATCTACTGGCGCCATGTGCGGGCAACCCTGATCCTGGCCGGTGCCGGTGCGGTTATTTCCGTCCTGGCGGCAGTGTTGC TGGCTTATGGCACACACCTGAGCCGTTCGCCGGTGACCCGTCTGGCTGCACGGGGAGCAACTCTCGGCTACGCCATTCCG GGCGCTGTGATCGGGTTGGGTGTTCTCTTGCCGCTGTCCTGGCTGGATCATACCCTGAACGATGTGACCTACCAGTGGTG GGGTGTGTTGCCAGGGTTAATCTTCACCGGTTCCATCACCGGTCTGATCTATGCGTATGTGGTGCGGTTCATGGCGGTAG CTCACTCAAGCGTTGAAGCCAGTCTGGAAAAGATCTCACCCGGCATTGAAGCCGCAGCCCGTACCCTGGGCGCCAGACCA ATTCGTGTCTTATGGCATGTGCATCTACCGCTGATTCGCGCAGGTATGTTGACCGGCGCTGCCCTGGTCTTTGTCGATGT GATGAAGGAACTTCCCATCACCTTGTTGCTCCGGCCTTTTGGCTACGAAACACTGGCGCTCTGGATCTGGCAGAACGTGG CTGAGTCGTTGTGGAGTGAAGCAGCTTTACCGGCGTTGACCATTGTGGTCGCTGATTTGCTGGTGGTAGGTATTCTTATT CGGTCGGCAACCCTGAGAGGCAGACATTCCATCGAGAGAACATAG
Upstream 100 bases:
>100_bases GAGATTGGCAGTCTGCAAGCTGATGCGATCAAGCTGATGAACGAAGCCGGGTATCAATAAACCGGGTTGTACCCGATAAT TATAGAGGAGTCAACGGGCG
Downstream 100 bases:
>100_bases CATTGGTTAGAGGAGACGTCTGATGAATTTCAGCGCAGAACCGGCACTTCAACTGCAAAACGTTACCCGACGGTACGGCA AGGTTGTCGCTGTGAATAAC
Product: binding-protein-dependent transport systems inner membrane component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 574; Mature: 574
Protein sequence:
>574_residues MRSMIVPLTRRYWNVMLIKRQQLAGNWSLPDRWSIIAFLIAGLALLPIAIILRMLVQPAPDVWQHLWATRLAEFLSNTVV LLIGVGLGTTLLGTALAWLVTAYRFPGQRLFDWALMLPMAVPSYVLAFVFMATFDYAGPVQKALRAWFGSSAWFPSIRSG GGAIFVMTLTLYPYVYLLARAAFHEHGRGTFEVARTLGVTRLQAFLRVVLPMARPSLVAGLSLVLMEVLTDVGTVRFLNF PTLSDGIFRIWHGMMDRDAALQSAAVLLLFAFGALLIERYTRGRARYVQEGSRGHGLAQVPLTGWRALAATLVCSFVLAT AFLLPVSQLIQWSVHELWHRMPEGLLAIYWRHVRATLILAGAGAVISVLAAVLLAYGTHLSRSPVTRLAARGATLGYAIP GAVIGLGVLLPLSWLDHTLNDVTYQWWGVLPGLIFTGSITGLIYAYVVRFMAVAHSSVEASLEKISPGIEAAARTLGARP IRVLWHVHLPLIRAGMLTGAALVFVDVMKELPITLLLRPFGYETLALWIWQNVAESLWSEAALPALTIVVADLLVVGILI RSATLRGRHSIERT
Sequences:
>Translated_574_residues MRSMIVPLTRRYWNVMLIKRQQLAGNWSLPDRWSIIAFLIAGLALLPIAIILRMLVQPAPDVWQHLWATRLAEFLSNTVV LLIGVGLGTTLLGTALAWLVTAYRFPGQRLFDWALMLPMAVPSYVLAFVFMATFDYAGPVQKALRAWFGSSAWFPSIRSG GGAIFVMTLTLYPYVYLLARAAFHEHGRGTFEVARTLGVTRLQAFLRVVLPMARPSLVAGLSLVLMEVLTDVGTVRFLNF PTLSDGIFRIWHGMMDRDAALQSAAVLLLFAFGALLIERYTRGRARYVQEGSRGHGLAQVPLTGWRALAATLVCSFVLAT AFLLPVSQLIQWSVHELWHRMPEGLLAIYWRHVRATLILAGAGAVISVLAAVLLAYGTHLSRSPVTRLAARGATLGYAIP GAVIGLGVLLPLSWLDHTLNDVTYQWWGVLPGLIFTGSITGLIYAYVVRFMAVAHSSVEASLEKISPGIEAAARTLGARP IRVLWHVHLPLIRAGMLTGAALVFVDVMKELPITLLLRPFGYETLALWIWQNVAESLWSEAALPALTIVVADLLVVGILI RSATLRGRHSIERT >Mature_574_residues MRSMIVPLTRRYWNVMLIKRQQLAGNWSLPDRWSIIAFLIAGLALLPIAIILRMLVQPAPDVWQHLWATRLAEFLSNTVV LLIGVGLGTTLLGTALAWLVTAYRFPGQRLFDWALMLPMAVPSYVLAFVFMATFDYAGPVQKALRAWFGSSAWFPSIRSG GGAIFVMTLTLYPYVYLLARAAFHEHGRGTFEVARTLGVTRLQAFLRVVLPMARPSLVAGLSLVLMEVLTDVGTVRFLNF PTLSDGIFRIWHGMMDRDAALQSAAVLLLFAFGALLIERYTRGRARYVQEGSRGHGLAQVPLTGWRALAATLVCSFVLAT AFLLPVSQLIQWSVHELWHRMPEGLLAIYWRHVRATLILAGAGAVISVLAAVLLAYGTHLSRSPVTRLAARGATLGYAIP GAVIGLGVLLPLSWLDHTLNDVTYQWWGVLPGLIFTGSITGLIYAYVVRFMAVAHSSVEASLEKISPGIEAAARTLGARP IRVLWHVHLPLIRAGMLTGAALVFVDVMKELPITLLLRPFGYETLALWIWQNVAESLWSEAALPALTIVVADLLVVGILI RSATLRGRHSIERT
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=148, Percent_Identity=34.4594594594595, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 63205; Mature: 63205
Theoretical pI: Translated: 10.78; Mature: 10.78
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSMIVPLTRRYWNVMLIKRQQLAGNWSLPDRWSIIAFLIAGLALLPIAIILRMLVQPAP CCCCHHHHHHHHHHHHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DVWQHLWATRLAEFLSNTVVLLIGVGLGTTLLGTALAWLVTAYRFPGQRLFDWALMLPMA HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VPSYVLAFVFMATFDYAGPVQKALRAWFGSSAWFPSIRSGGGAIFVMTLTLYPYVYLLAR HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH AAFHEHGRGTFEVARTLGVTRLQAFLRVVLPMARPSLVAGLSLVLMEVLTDVGTVRFLNF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECC PTLSDGIFRIWHGMMDRDAALQSAAVLLLFAFGALLIERYTRGRARYVQEGSRGHGLAQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC PLTGWRALAATLVCSFVLATAFLLPVSQLIQWSVHELWHRMPEGLLAIYWRHVRATLILA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GAGAVISVLAAVLLAYGTHLSRSPVTRLAARGATLGYAIPGAVIGLGVLLPLSWLDHTLN CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DVTYQWWGVLPGLIFTGSITGLIYAYVVRFMAVAHSSVEASLEKISPGIEAAARTLGARP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH IRVLWHVHLPLIRAGMLTGAALVFVDVMKELPITLLLRPFGYETLALWIWQNVAESLWSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHH AALPALTIVVADLLVVGILIRSATLRGRHSIERT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MRSMIVPLTRRYWNVMLIKRQQLAGNWSLPDRWSIIAFLIAGLALLPIAIILRMLVQPAP CCCCHHHHHHHHHHHHHEEHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DVWQHLWATRLAEFLSNTVVLLIGVGLGTTLLGTALAWLVTAYRFPGQRLFDWALMLPMA HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VPSYVLAFVFMATFDYAGPVQKALRAWFGSSAWFPSIRSGGGAIFVMTLTLYPYVYLLAR HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH AAFHEHGRGTFEVARTLGVTRLQAFLRVVLPMARPSLVAGLSLVLMEVLTDVGTVRFLNF HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEECC PTLSDGIFRIWHGMMDRDAALQSAAVLLLFAFGALLIERYTRGRARYVQEGSRGHGLAQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC PLTGWRALAATLVCSFVLATAFLLPVSQLIQWSVHELWHRMPEGLLAIYWRHVRATLILA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC GAGAVISVLAAVLLAYGTHLSRSPVTRLAARGATLGYAIPGAVIGLGVLLPLSWLDHTLN CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH DVTYQWWGVLPGLIFTGSITGLIYAYVVRFMAVAHSSVEASLEKISPGIEAAARTLGARP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH IRVLWHVHLPLIRAGMLTGAALVFVDVMKELPITLLLRPFGYETLALWIWQNVAESLWSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHH AALPALTIVVADLLVVGILIRSATLRGRHSIERT HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]