Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523643

Identifier: 222523643

GI number: 222523643

Start: 415227

End: 416357

Strand: Reverse

Name: 222523643

Synonym: Chy400_0349

Alternate gene names: NA

Gene position: 416357-415227 (Counterclockwise)

Preceding gene: 222523644

Following gene: 222523642

Centisome position: 7.9

GC content: 55.17

Gene sequence:

>1131_bases
ATGCTCTTCACACGAAGGAAAAAGGCCGGAATAACACTTGTTGGGTTCATTCTTCTCGTAGTATCGCTGGTGGCCTGTAC
GAATCAGAGTGCATCACAGACTGCCCCTCAGACTATTCGGGAAACCGTAGTCGTCACTCAGGAAGTTCCTGTTCGGGAAA
CGGTAGTTGTGCGCGAGACAGTGGAAGTTCCGGTTGAGGAACCGATTGTCTACGTCTACTCTGCCCGTCACTACGGCCAG
ATGGAAACGGCGTTTGCCGAATTTACAAAAGAGACGGGCATTGAGGTGCGGTTTACCTTTGGCAGCGATGCCGAATTGCG
TGAGCGGTTGAAAGCTGAGGGGCGCTTCACACCGGCTGATGTGCTGTTCACGGTCGATGCCGCCAATCTCTGGCTGGCAG
CGCAGGAAGGTTTGCTGCGTCCGATCAATTCGGATGTGTTGGAGAGCAATATTCCCGACTATTTGCAGGATCCGAGCAAT
CAGTGGTATGCTCTCTCCCTGCGGGTGCGCACCATCGCGTACCATCCAGATCGGGTCAATCCTGAAGAGATCGCCACCTA
CGAGTCGCTGGCCGATCCAAAGTGGGCAGGCCGCATCTGCTGGCGCCCGTCAACCAAGTCGTACACCCAGTCGCTGGTGA
GCAGCCTGATTGTCCACCACGGCTACGACAAGGCCAAAGAGATTGTGACTGGCTGGGCACAGAATGCCAAAGAGTATATT
GACAGCGACACGCGAATTTTGCAGACCATTGCCGAGGGAGGATGCGACATCAGTGTTGTCAATCACTACTACCTGGCTCG
CTTGCTCAGTGAAGACGCCAATTACCCGGTTAAGCTCCTCTGGGCCAATCAGGCCGAGCAGGGTGTGCATGTGAACGCTA
GTGGCGCCGGTGTGACGACATACGCCCGCCATCCAGAGAATGCCATTCGCTTGCTTGAGTGGCTGAGCACCGAGCGCGGT
CAGCGTCTGTTCGCCGACAGCAATTTCGAGTATCCGGCAAACCCCAATGTAGCACCGCATGAGCTGATCCAGCAGTGGGG
TGACTTCAAGCGCGATACACTGCAGATTAGCGAGATTGGCAGTCTGCAAGCTGATGCGATCAAGCTGATGAACGAAGCCG
GGTATCAATAA

Upstream 100 bases:

>100_bases
GACAGGCAATCTTAATTTAAGAAGTATTTGGTTGACTAAATTGGATTATTAGTGTATACTAATAAAGTCAATAAGGTTCT
AGTAATTGGGGAGGAGATAC

Downstream 100 bases:

>100_bases
ACCGGGTTGTACCCGATAATTATAGAGGAGTCAACGGGCGATGCGCAGTATGATCGTCCCGTTGACTCGCCGGTATTGGA
ACGTCATGCTGATTAAACGT

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRETVEVPVEEPIVYVYSARHYGQ
METAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPADVLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSN
QWYALSLRVRTIAYHPDRVNPEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI
DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTTYARHPENAIRLLEWLSTERG
QRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIGSLQADAIKLMNEAGYQ

Sequences:

>Translated_376_residues
MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRETVEVPVEEPIVYVYSARHYGQ
METAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPADVLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSN
QWYALSLRVRTIAYHPDRVNPEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI
DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTTYARHPENAIRLLEWLSTERG
QRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIGSLQADAIKLMNEAGYQ
>Mature_376_residues
MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRETVEVPVEEPIVYVYSARHYGQ
METAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPADVLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSN
QWYALSLRVRTIAYHPDRVNPEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI
DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTTYARHPENAIRLLEWLSTERG
QRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIGSLQADAIKLMNEAGYQ

Specific function: Unknown

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 42266; Mature: 42266

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRET
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCCCEEEEEHH
VEVPVEEPIVYVYSARHYGQMETAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPAD
HCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCHH
VLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSNQWYALSLRVRTIAYHPDRVN
EEEEEECHHEEEEHHCCCCCCCCHHHHHCCCCHHHCCCCCCEEEEEEEEEEEEECCCCCC
PEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI
HHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTT
CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCEE
YARHPENAIRLLEWLSTERGQRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIG
ECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHEEEHHHCC
SLQADAIKLMNEAGYQ
CCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLFTRRKKAGITLVGFILLVVSLVACTNQSASQTAPQTIRETVVVTQEVPVRETVVVRET
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEECCCCCCCEEEEEHH
VEVPVEEPIVYVYSARHYGQMETAFAEFTKETGIEVRFTFGSDAELRERLKAEGRFTPAD
HCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCHH
VLFTVDAANLWLAAQEGLLRPINSDVLESNIPDYLQDPSNQWYALSLRVRTIAYHPDRVN
EEEEEECHHEEEEHHCCCCCCCCHHHHHCCCCHHHCCCCCCEEEEEEEEEEEEECCCCCC
PEEIATYESLADPKWAGRICWRPSTKSYTQSLVSSLIVHHGYDKAKEIVTGWAQNAKEYI
HHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DSDTRILQTIAEGGCDISVVNHYYLARLLSEDANYPVKLLWANQAEQGVHVNASGAGVTT
CCHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCEE
YARHPENAIRLLEWLSTERGQRLFADSNFEYPANPNVAPHELIQQWGDFKRDTLQISEIG
ECCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHEEEHHHCC
SLQADAIKLMNEAGYQ
CCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]