| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is dnaG [C]
Identifier: 222523597
GI number: 222523597
Start: 367254
End: 368279
Strand: Reverse
Name: dnaG [C]
Synonym: Chy400_0303
Alternate gene names: 222523597
Gene position: 368279-367254 (Counterclockwise)
Preceding gene: 222523598
Following gene: 222523596
Centisome position: 6.99
GC content: 67.74
Gene sequence:
>1026_bases ATGACACTCACCACCGCCCCTACCATCGATCTACCGGCCCTCATCGAGCGGCTCGGCGTGCGCTTGCACCGTTATGGGCG TTCCTATCGGTGCGCGTGCCCGTTGCACGCCGGCGATAATGAGCTAGCCTTCAGCATCTATCAGAGCCGTTCCGGGCAAT GGCGCTGGCATTGCTTTAGCGGCGATTGCGGCGATGGCGATGCCATCGCGTTTGTGCGCCGCTACTATGGCGTTGGCTAT CGTGAGGCCTGTCAGATGCTCGGCGTGACGCCGGCCAGCGCACCGAGCGGGCCGCGATCGCCACAGCCGCCGCCCGTGGA ACCGCCCTCGGCACAGTGGCAACACACCGTTGGGCGGTTGGTGGATCAGGCCGTGCAGGCGCTCTGGTCGCCGGCTGGCC AAGCGGCTCGCGCCTATCTCTACCAACGCGGGTTGACGGATGCCCTGATCCGGCGCGCCGGCCTCGGCTACCATCCGGCA GCAACCCGCATCCGGGCCGAGACGCTCGGCCTTGACGGTGATAACCCGTACTATCCCGCCGGCATTGTCATTCCGTATTG GGTAGAGGGCGACCTCTGGCGCGTGCAGGTGCGCCGCCTATCCAACACCGAGCCGCGCTATCTCTCGCTGGCCGGCTCAT CCGGCGCACCGCCCTACCTCATCGCGCCGATCACCTCGGCCAAGCCGTTGGTGTTAGCCGAGGGGCCGGTTGACGTGCTG GCCATCATGCAGGCCGCCGGCGATCTGGTGACAGCGATTGGCACCGGGGCGACGGGGTGCCGAGCGGTGCGCTGGATCGC TCGCTGCGCCGTTGCGCCGCTGGTGCTGGCCGCCCATGATGCGGATGAGGCCGGTGACGCGGCGGCGGCCTACTGGTGCG ACGCTTTGCAACCGCGCTGCACGCGCTGGCGGCCTACGCTGCACGATCCCGCCGAGATGCTGCAACTTGGCGGGTTAGCG TTGGTGCGACAGTGGATTGAGCAAGGGCTGGCCAGCGCCGAGGGCGACGGCTACAATAGGCGGTAG
Upstream 100 bases:
>100_bases TCAAAACCGGTTTTGAGGAGGGTTTTGAGGAAGCCGATTGAACGCATTCCAACGCGCTAAACCGAGGTTTTGAGGTTTTG AGTAACGGAAGTGAGCCGCT
Downstream 100 bases:
>100_bases GCACAATGATGCGTCAACCCTGACAACACTCGGAGGTACCTATGGCACATCGAGAGACAAGCCGTGATGAGGTGATCGCG GCGTTGCACGCGAATCGCGG
Product: zinc finger CHC2-family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MTLTTAPTIDLPALIERLGVRLHRYGRSYRCACPLHAGDNELAFSIYQSRSGQWRWHCFSGDCGDGDAIAFVRRYYGVGY REACQMLGVTPASAPSGPRSPQPPPVEPPSAQWQHTVGRLVDQAVQALWSPAGQAARAYLYQRGLTDALIRRAGLGYHPA ATRIRAETLGLDGDNPYYPAGIVIPYWVEGDLWRVQVRRLSNTEPRYLSLAGSSGAPPYLIAPITSAKPLVLAEGPVDVL AIMQAAGDLVTAIGTGATGCRAVRWIARCAVAPLVLAAHDADEAGDAAAAYWCDALQPRCTRWRPTLHDPAEMLQLGGLA LVRQWIEQGLASAEGDGYNRR
Sequences:
>Translated_341_residues MTLTTAPTIDLPALIERLGVRLHRYGRSYRCACPLHAGDNELAFSIYQSRSGQWRWHCFSGDCGDGDAIAFVRRYYGVGY REACQMLGVTPASAPSGPRSPQPPPVEPPSAQWQHTVGRLVDQAVQALWSPAGQAARAYLYQRGLTDALIRRAGLGYHPA ATRIRAETLGLDGDNPYYPAGIVIPYWVEGDLWRVQVRRLSNTEPRYLSLAGSSGAPPYLIAPITSAKPLVLAEGPVDVL AIMQAAGDLVTAIGTGATGCRAVRWIARCAVAPLVLAAHDADEAGDAAAAYWCDALQPRCTRWRPTLHDPAEMLQLGGLA LVRQWIEQGLASAEGDGYNRR >Mature_340_residues TLTTAPTIDLPALIERLGVRLHRYGRSYRCACPLHAGDNELAFSIYQSRSGQWRWHCFSGDCGDGDAIAFVRRYYGVGYR EACQMLGVTPASAPSGPRSPQPPPVEPPSAQWQHTVGRLVDQAVQALWSPAGQAARAYLYQRGLTDALIRRAGLGYHPAA TRIRAETLGLDGDNPYYPAGIVIPYWVEGDLWRVQVRRLSNTEPRYLSLAGSSGAPPYLIAPITSAKPLVLAEGPVDVLA IMQAAGDLVTAIGTGATGCRAVRWIARCAVAPLVLAAHDADEAGDAAAAYWCDALQPRCTRWRPTLHDPAEMLQLGGLAL VRQWIEQGLASAEGDGYNRR
Specific function: DNA Primase Is The Polymerase That Synthesizes Small RNA Primers For The Okazaki Fragments On Both Template Strands At Replication Forks During Chromosomal DNA Synthesis. [C]
COG id: COG0358
COG function: function code L; DNA primase (bacterial type)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.7.-
Molecular weight: Translated: 36927; Mature: 36796
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTTAPTIDLPALIERLGVRLHRYGRSYRCACPLHAGDNELAFSIYQSRSGQWRWHCFS CCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEEC GDCGDGDAIAFVRRYYGVGYREACQMLGVTPASAPSGPRSPQPPPVEPPSAQWQHTVGRL CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VDQAVQALWSPAGQAARAYLYQRGLTDALIRRAGLGYHPAATRIRAETLGLDGDNPYYPA HHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHEEHHHCCCCCCCCCCCC GIVIPYWVEGDLWRVQVRRLSNTEPRYLSLAGSSGAPPYLIAPITSAKPLVLAEGPVDVL CEEEEEEECCCEEEEHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCEEEECCCHHHH AIMQAAGDLVTAIGTGATGCRAVRWIARCAVAPLVLAAHDADEAGDAAAAYWCDALQPRC HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCH TRWRPTLHDPAEMLQLGGLALVRQWIEQGLASAEGDGYNRR HCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TLTTAPTIDLPALIERLGVRLHRYGRSYRCACPLHAGDNELAFSIYQSRSGQWRWHCFS CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEEC GDCGDGDAIAFVRRYYGVGYREACQMLGVTPASAPSGPRSPQPPPVEPPSAQWQHTVGRL CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH VDQAVQALWSPAGQAARAYLYQRGLTDALIRRAGLGYHPAATRIRAETLGLDGDNPYYPA HHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHEEHHHCCCCCCCCCCCC GIVIPYWVEGDLWRVQVRRLSNTEPRYLSLAGSSGAPPYLIAPITSAKPLVLAEGPVDVL CEEEEEEECCCEEEEHHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCEEEECCCHHHH AIMQAAGDLVTAIGTGATGCRAVRWIARCAVAPLVLAAHDADEAGDAAAAYWCDALQPRC HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHCCCCH TRWRPTLHDPAEMLQLGGLALVRQWIEQGLASAEGDGYNRR HCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA