| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is yfjI [H]
Identifier: 222523598
GI number: 222523598
Start: 368395
End: 370878
Strand: Reverse
Name: yfjI [H]
Synonym: Chy400_0304
Alternate gene names: 222523598
Gene position: 370878-368395 (Counterclockwise)
Preceding gene: 222523599
Following gene: 222523597
Centisome position: 7.04
GC content: 66.43
Gene sequence:
>2484_bases ATGAAGAAACATACCTCTACTTCATCGTATCACAACGGATCGCCGGCGTCAACGCCGCCAGATCACCTGATTGCCGAGGC GCTGCGGGCGCTGGCCGGGCCGGATGACGCCGCTGCACAGCAAGCCGCGCAGACGGATTGCGGCCCGTGGAATCACGTTC GGGATGCCCTCGCAACGGCCCGCGCCAGTGGCGGCCAGCCAGCCGCGCAACGGGCGCTGGCGGCCCTGCAACACCAGTAC CCTGACCTCACCACGCTACTGGCCAGCGCGCAAGCCCTTGATCTCGATGATGACGATGAACCTGCCAGCGATGCACCGTC GCCGTTGCCGCTCGGCGGGCTGCCGGGCTGGGTGCGGGAGATGGTGCGCCATACCGCCGAGGCGGTGCAAGTGCCGGTTG ACCTTGCTCATGCGCTGGCCCTCGGCGCGTTATCCGTCGCCACCGCCGGCGCGATGCGCGTGCAGCTTACCTCGGATTGG AACGAAGAAACGTGCCTCTATGTGATGCCGGCGCTGCCGTCTGGCGAACGCAAAAGCGCCGCCTTCGCCCTGCTCATTGG GCCGATTGAACAGTGGGAAGATGACGAACGCAACCGGCGCGCCCCTGAGTACACCACCAGCCAAGCGCGCAAGCGCGTGC TTGATAAAGAGATTGAGCGGTTGACGGCTGAGGCCGCCAAAGAGCAAGATGCCAGCCGGAAGAAACAACTAGAATGGGCG CTGGCAACGGCGATCACCGAGTATGAGCGCGTTGCGCTGGCCGCGCCATTTCGCCGGCTCTTGCAAAACGCAACACCGGA AGCGTTGACCTCGGCGCTGGTTGCGCACCAGCGCATCGCGGTAGTATCGCCGGAACCTGACAGTATGCAGGTGCTGATCG GCGCGGGCCGTGACGGGCCGCCGATGCTGGAAGCCATCTTAAAGGGCTACAACGGTGAACGGCTGATCATTGACCGGCAG ACGCGCCAATCACAACGGGTTGCAGCGCCGGCGCTCACGATGGTGCTGGCCGCCCAACCGCATGCCGTGCGTGACCTGAT CCGCAACCGCGCCTTGATTGAACGCGGCGTTTTAGCCCGCTACCTCATCCTCTTGCCGCCGTCGCGTCTCGGCGCTCGCG CCATTGCGCCGCCGGTCATTCCTGAACTGGTGAAAGCGACCTATGCCACGCATCTGCGCTGGCTGCTTGATACGTGCCAG CCGCCAGCGCCAGAGCAGCGCCATACCGTCACGCTCAGCGCCGAGGCGTTGCATGCGGTGCATGCGATGCAAGCGATGAT TGAGCCGCGCTTACATGAGCAACGGGGCGATCTGGCCGGTCATCCGCTCTTGCGCGCTTGGGCTGGCAAGCTGACCGGTC ACGTGGTGCGCATTGCCGCCAATCTGCACGCCGCTCATTGCGCGGCGCGCAAGGTGTTGCCATGGGCCGAGCCGATCAGC GGCGAGGTGATGCGGGCCGCCGTCGCCTACTGCGAGCCGCTGATCGCGCACATGCGGGCCGTGTTGGGTGATGCGGTGAT GAGCGATGCGGATCGCGTTGCCCGCCGGGTACGCGCTATCATTGCGAGATACGCCGCTCACGGCCAGATCACCGAGCGGA TGATCTATCAGGCAATGCGCACGGAAAGCCGTGAGATGATTGAACGCGCCCTGCAAACGCTGCTCAAAGACGGCGACCTT GAAGGGCCGCTCAAGGTGACAGGCCGCAAAGGGGGCCGCCCATCCAAGGTGTATCGCGTGCTGATCGCGCCTAACGCCAC CAGCGCCGCCACTACCACGCCGCCCGGTGCATCGTATGCCGCACCGGAACCCGCACCGGAACCCGCACCGGAACCCGCAC CGGAACCCGCACCGGAACCCGCACCGGAACCCGCACCGGAACCCGCACCGGAACCGGAACCCGTACCGCCCGCTGCGCCG CCATCGGCAGCGACGAACGCCGCTGCGCCGGCCAGCAAGCGCGTCATCTCAATGCCACCAACGCCGCCGGCGTGGTATGA CGTGGTGAAGCCGCTCACACAGCGATTGCCGGCAACGCTCAGCGCCGAAATGGGCGCGCCCGCCGGCCAGCCGCTCGGCA TTCTGATCCGGCGCAATGACCGGCCCGCTAGCAGCCCGGATGCGACGCTGTATATCGCGCCGTTTGATCTGCCGGAAGGG GTGAGCCGCGCCGAGGCCATCGCCGCCGGGGTGCAACACGTGCTAGCCGAGCTAAGGCGCCGCTGGCCGGATGCGCATCC GGCCAGCGCCGAGGGTGCCGAGGGTGCCGAGGGTGATGAGGGTGATGAGGGTGATAACGATCTGCCGCCCCTACCCGCCG GCGTCAAGCCGAGTGCTTGGCGCGCAGTCAATTGGCGCTATGTCATGCACTTGGCAACCAAGCGCCCTGCCGATTGGGAA CGCGGCGTTCGCACGCACGCCGTCTTAAAGGGCATCCCGCCAGAGGCGCTGCTTGCCGCCGCGCAAGCGCGGGCTGGGTT GTGA
Upstream 100 bases:
>100_bases GCAAGAGGTGAAGGGAGGCAGGCGATGGCAATGGATCAGTTTGTCTTGAAATACACCAACGCCGCGTTGCCAAGACGCGG CGTTGGACAAAGGAACAAAT
Downstream 100 bases:
>100_bases GAGGTTTTGAGTATCTCAAAACCGGTTTTGAGGAGGGTTTTGAGGAAGCCGATTGAACGCATTCCAACGCGCTAAACCGA GGTTTTGAGGTTTTGAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MKKHTSTSSYHNGSPASTPPDHLIAEALRALAGPDDAAAQQAAQTDCGPWNHVRDALATARASGGQPAAQRALAALQHQY PDLTTLLASAQALDLDDDDEPASDAPSPLPLGGLPGWVREMVRHTAEAVQVPVDLAHALALGALSVATAGAMRVQLTSDW NEETCLYVMPALPSGERKSAAFALLIGPIEQWEDDERNRRAPEYTTSQARKRVLDKEIERLTAEAAKEQDASRKKQLEWA LATAITEYERVALAAPFRRLLQNATPEALTSALVAHQRIAVVSPEPDSMQVLIGAGRDGPPMLEAILKGYNGERLIIDRQ TRQSQRVAAPALTMVLAAQPHAVRDLIRNRALIERGVLARYLILLPPSRLGARAIAPPVIPELVKATYATHLRWLLDTCQ PPAPEQRHTVTLSAEALHAVHAMQAMIEPRLHEQRGDLAGHPLLRAWAGKLTGHVVRIAANLHAAHCAARKVLPWAEPIS GEVMRAAVAYCEPLIAHMRAVLGDAVMSDADRVARRVRAIIARYAAHGQITERMIYQAMRTESREMIERALQTLLKDGDL EGPLKVTGRKGGRPSKVYRVLIAPNATSAATTTPPGASYAAPEPAPEPAPEPAPEPAPEPAPEPAPEPAPEPEPVPPAAP PSAATNAAAPASKRVISMPPTPPAWYDVVKPLTQRLPATLSAEMGAPAGQPLGILIRRNDRPASSPDATLYIAPFDLPEG VSRAEAIAAGVQHVLAELRRRWPDAHPASAEGAEGAEGDEGDEGDNDLPPLPAGVKPSAWRAVNWRYVMHLATKRPADWE RGVRTHAVLKGIPPEALLAAAQARAGL
Sequences:
>Translated_827_residues MKKHTSTSSYHNGSPASTPPDHLIAEALRALAGPDDAAAQQAAQTDCGPWNHVRDALATARASGGQPAAQRALAALQHQY PDLTTLLASAQALDLDDDDEPASDAPSPLPLGGLPGWVREMVRHTAEAVQVPVDLAHALALGALSVATAGAMRVQLTSDW NEETCLYVMPALPSGERKSAAFALLIGPIEQWEDDERNRRAPEYTTSQARKRVLDKEIERLTAEAAKEQDASRKKQLEWA LATAITEYERVALAAPFRRLLQNATPEALTSALVAHQRIAVVSPEPDSMQVLIGAGRDGPPMLEAILKGYNGERLIIDRQ TRQSQRVAAPALTMVLAAQPHAVRDLIRNRALIERGVLARYLILLPPSRLGARAIAPPVIPELVKATYATHLRWLLDTCQ PPAPEQRHTVTLSAEALHAVHAMQAMIEPRLHEQRGDLAGHPLLRAWAGKLTGHVVRIAANLHAAHCAARKVLPWAEPIS GEVMRAAVAYCEPLIAHMRAVLGDAVMSDADRVARRVRAIIARYAAHGQITERMIYQAMRTESREMIERALQTLLKDGDL EGPLKVTGRKGGRPSKVYRVLIAPNATSAATTTPPGASYAAPEPAPEPAPEPAPEPAPEPAPEPAPEPAPEPEPVPPAAP PSAATNAAAPASKRVISMPPTPPAWYDVVKPLTQRLPATLSAEMGAPAGQPLGILIRRNDRPASSPDATLYIAPFDLPEG VSRAEAIAAGVQHVLAELRRRWPDAHPASAEGAEGAEGDEGDEGDNDLPPLPAGVKPSAWRAVNWRYVMHLATKRPADWE RGVRTHAVLKGIPPEALLAAAQARAGL >Mature_827_residues MKKHTSTSSYHNGSPASTPPDHLIAEALRALAGPDDAAAQQAAQTDCGPWNHVRDALATARASGGQPAAQRALAALQHQY PDLTTLLASAQALDLDDDDEPASDAPSPLPLGGLPGWVREMVRHTAEAVQVPVDLAHALALGALSVATAGAMRVQLTSDW NEETCLYVMPALPSGERKSAAFALLIGPIEQWEDDERNRRAPEYTTSQARKRVLDKEIERLTAEAAKEQDASRKKQLEWA LATAITEYERVALAAPFRRLLQNATPEALTSALVAHQRIAVVSPEPDSMQVLIGAGRDGPPMLEAILKGYNGERLIIDRQ TRQSQRVAAPALTMVLAAQPHAVRDLIRNRALIERGVLARYLILLPPSRLGARAIAPPVIPELVKATYATHLRWLLDTCQ PPAPEQRHTVTLSAEALHAVHAMQAMIEPRLHEQRGDLAGHPLLRAWAGKLTGHVVRIAANLHAAHCAARKVLPWAEPIS GEVMRAAVAYCEPLIAHMRAVLGDAVMSDADRVARRVRAIIARYAAHGQITERMIYQAMRTESREMIERALQTLLKDGDL EGPLKVTGRKGGRPSKVYRVLIAPNATSAATTTPPGASYAAPEPAPEPAPEPAPEPAPEPAPEPAPEPAPEPEPVPPAAP PSAATNAAAPASKRVISMPPTPPAWYDVVKPLTQRLPATLSAEMGAPAGQPLGILIRRNDRPASSPDATLYIAPFDLPEG VSRAEAIAAGVQHVLAELRRRWPDAHPASAEGAEGAEGDEGDEGDNDLPPLPAGVKPSAWRAVNWRYVMHLATKRPADWE RGVRTHAVLKGIPPEALLAAAQARAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788978, Length=366, Percent_Identity=24.5901639344262, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88555; Mature: 88555
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKHTSTSSYHNGSPASTPPDHLIAEALRALAGPDDAAAQQAAQTDCGPWNHVRDALATA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHH RASGGQPAAQRALAALQHQYPDLTTLLASAQALDLDDDDEPASDAPSPLPLGGLPGWVRE HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH MVRHTAEAVQVPVDLAHALALGALSVATAGAMRVQLTSDWNEETCLYVMPALPSGERKSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCCCC AFALLIGPIEQWEDDERNRRAPEYTTSQARKRVLDKEIERLTAEAAKEQDASRKKQLEWA EEEEEECCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATAITEYERVALAAPFRRLLQNATPEALTSALVAHQRIAVVSPEPDSMQVLIGAGRDGP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCH PMLEAILKGYNGERLIIDRQTRQSQRVAAPALTMVLAAQPHAVRDLIRNRALIERGVLAR HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YLILLPPSRLGARAIAPPVIPELVKATYATHLRWLLDTCQPPAPEQRHTVTLSAEALHAV HHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHH HAMQAMIEPRLHEQRGDLAGHPLLRAWAGKLTGHVVRIAANLHAAHCAARKVLPWAEPIS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GEVMRAAVAYCEPLIAHMRAVLGDAVMSDADRVARRVRAIIARYAAHGQITERMIYQAMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TESREMIERALQTLLKDGDLEGPLKVTGRKGGRPSKVYRVLIAPNATSAATTTPPGASYA HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC APEPAPEPAPEPAPEPAPEPAPEPAPEPAPEPEPVPPAAPPSAATNAAAPASKRVISMPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC TPPAWYDVVKPLTQRLPATLSAEMGAPAGQPLGILIRRNDRPASSPDATLYIAPFDLPEG CCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCH VSRAEAIAAGVQHVLAELRRRWPDAHPASAEGAEGAEGDEGDEGDNDLPPLPAGVKPSAW HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH RAVNWRYVMHLATKRPADWERGVRTHAVLKGIPPEALLAAAQARAGL HCCCHHEEEHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure MKKHTSTSSYHNGSPASTPPDHLIAEALRALAGPDDAAAQQAAQTDCGPWNHVRDALATA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHH RASGGQPAAQRALAALQHQYPDLTTLLASAQALDLDDDDEPASDAPSPLPLGGLPGWVRE HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH MVRHTAEAVQVPVDLAHALALGALSVATAGAMRVQLTSDWNEETCLYVMPALPSGERKSA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCCCC AFALLIGPIEQWEDDERNRRAPEYTTSQARKRVLDKEIERLTAEAAKEQDASRKKQLEWA EEEEEECCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LATAITEYERVALAAPFRRLLQNATPEALTSALVAHQRIAVVSPEPDSMQVLIGAGRDGP HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCCCH PMLEAILKGYNGERLIIDRQTRQSQRVAAPALTMVLAAQPHAVRDLIRNRALIERGVLAR HHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YLILLPPSRLGARAIAPPVIPELVKATYATHLRWLLDTCQPPAPEQRHTVTLSAEALHAV HHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHH HAMQAMIEPRLHEQRGDLAGHPLLRAWAGKLTGHVVRIAANLHAAHCAARKVLPWAEPIS HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GEVMRAAVAYCEPLIAHMRAVLGDAVMSDADRVARRVRAIIARYAAHGQITERMIYQAMR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TESREMIERALQTLLKDGDLEGPLKVTGRKGGRPSKVYRVLIAPNATSAATTTPPGASYA HHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCC APEPAPEPAPEPAPEPAPEPAPEPAPEPAPEPEPVPPAAPPSAATNAAAPASKRVISMPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC TPPAWYDVVKPLTQRLPATLSAEMGAPAGQPLGILIRRNDRPASSPDATLYIAPFDLPEG CCCHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCH VSRAEAIAAGVQHVLAELRRRWPDAHPASAEGAEGAEGDEGDEGDNDLPPLPAGVKPSAW HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH RAVNWRYVMHLATKRPADWERGVRTHAVLKGIPPEALLAAAQARAGL HCCCHHEEEHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]